Tympanuchus pallidicinctus (lesser prairie-chicken): 128073816
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Entry
128073816 CDS
T08967
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128073816 (PRDM4)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128073816 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
SET
zf-met
zf-C2H2_jaz
PyrI_C
Mu-like_Com
Motif
Other DBs
NCBI-GeneID:
128073816
NCBI-ProteinID:
XP_052524974
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MYPRMNEMNLSPVGMDQLTSSSVGNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGIPERNYTLPPPPYPHLESSYFRHILPGILSYLADRP
PPQYIHPNTINVDSNPALSVPSNPSALDPYQPSGTVGLEPGIVPMDSRAVNAHGAQNMHP
SDSHEVALDSTITMESVSRVTSPISTDGMTEELTMDDVARDHSQIPNGSRSHEPLAVDTV
GSNLTPDAVGHGGVIPIHSSTLELPVPVVMEPDHIAGRVAGMSDSTLNDSIHTVAMSTNS
VSVALSTSHNLASLDSVALHEVGLSLEPVAVSSINQEVAMGPGHVDVSADNLAFVPSSLQ
MEDSNSNKENMATLFTIWCTLCDKAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQ
SLMGAEVDVGLLLIGVWTRETIPVRTCFGPLIGQQSHSLEVADWTDKAASHIWKIYHNGV
LEFCIITTDETECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSRDIPPEHELFFYYSRD
YARQLGVPEHPDVHICHCGKECASYADFKAHLSSHIHSHLPSQGHSSSHGPGHGKERKWK
CSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLC
DKSFTQKAHLESHMVIHTGEKNLKCDYCEKLFMRRQDLKQHVLTHTQERQIKCPKCDKLF
LRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKICKGPTSSLSAPEEEEEDSEE
ELIDSLRTEDCRINNGVYSTGDALTGHK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccagaatgaatgaaatgaacttgagtcctgtagggatggaccagctgacctcg
tcctctgtcggcaatgccctgcctgtctcagggagtcacctgggattggcagcatcaccc
actcacaacgccataccagcaccaggtttgccggttgcaattccaaacttgggcccctcc
ttgagttccttgccctctgctctgtctctgatgctcccaatgggtattggggatcgagga
gtgatgtgtggtataccagagagaaactacaccctacctccaccgccataccctcacctg
gagagcagctacttcagacacattctacctggtatcttatcttatttggctgacagacct
ccgcctcagtacatccatcccaacactataaatgttgatagcaatccagcattgtcagtg
cccagcaatccctcagccctggacccctaccagcccagtggaaccgtggggctggaacca
gggatcgtgcccatggactcccgcgcagtcaatgcgcacggtgctcaaaacatgcatcct
agcgacagccacgaggtagctctggatagtacaatcactatggagagtgtttcgagggta
accagccccatctctacggatgggatgacagaggagcttacaatggacgacgtagccagg
gatcattcgcagatcccaaatggctcccggagccatgaacctttggccgtagacacggtg
ggaagcaacttgacgccagacgcagtggggcacggcggtgtcatccccattcacagcagc
actttggaactccctgtccctgtcgtcatggagcccgaccacatcgctgggcgggtggca
gggatgtcggacagcacactaaatgactccattcataccgtggccatgagcaccaactct
gtgagcgtggcactctctacctcacacaacctcgcttccctggactcggtagccttgcac
gaagtgggcctcagcctcgagccagtggcggtgtcttccataaatcaggaagtagccatg
gggccgggtcacgtggatgtgtccgcagacaatcttgccttcgtaccgtcctctctgcaa
atggaagactccaattcaaacaaggagaacatggcaaccttgtttaccatatggtgcacg
ctgtgtgacaaggcgtatccatcagactgccctgaccatggacctgtcacctttgtccca
gacaccccaatagagagccgagccaggctttctctccctaagcagcttgtcctacggcag
tctctcatgggagctgaagtggatgttggtcttctactgataggtgtgtggacacgagaa
accattcctgtaagaacttgttttggacctctgattgggcagcagagccattctctggag
gtggctgactggacagacaaagcagctagtcacatctggaagatctatcacaatggtgtc
ctagagttctgcatcattacaactgatgaaactgaatgtaactggatgatgtttgtacgc
aaagccaggaaccgggaagagcagaatctggtggcttatcctcacgatggaaaaatttac
ttttgcacctctcgggacatcccacctgagcacgagcttttcttttattacagtcgggat
tacgcacggcagcttggtgtccctgaacatccggacgtgcacatctgccactgtggaaag
gaatgtgcttcctatgcggacttcaaggcccatttgagcagccatattcacagccatctc
cccagtcagggccacagcagcagccacgggccaggccacggcaaggaaaggaagtggaag
tgctccatgtgcccccaggcttttatctccccttccaagctccacgtccacttcatgggg
cacatgggcatgaagccacacaagtgcgatttctgtagcaaagctttcagtgatcccagc
aacttacgcacgcacctcaagatacacacaggtcagaagaattatcggtgtaccctctgt
gacaaatcgttcacccagaaggctcacttggaatcacacatggtcatccacaccggggag
aagaatctgaagtgtgattactgcgaaaagctgttcatgcggaggcaggacctcaagcag
cacgtacttacccacacacaagaacggcagatcaagtgccccaagtgtgacaagctgttt
ctgaggacaaatcatctgaagaagcatctcaactcacatgaaggaaagagggactatgtc
tgtgaaaaatgcaccaaggcttatctaaccaaatatcacctcactcgccacttaaaaata
tgtaaaggccccacatccagtctgtcagccccagaggaggaagaggaggattcagaggag
gaactgatagactcactgaggactgaggactgtaggattaacaatggagtctactcaact
ggtgatgccctcacgggacacaaatga
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