Tympanuchus pallidicinctus (lesser prairie-chicken): 128073872
Help
Entry
128073872 CDS
T08967
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128073872 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128073872 (ARID2)
03021 Transcription machinery [BR:
tpai03021
]
128073872 (ARID2)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128073872 (ARID2)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Helix-turn-helix
ARID
128073872 (ARID2)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128073872 (ARID2)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
128073872 (ARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
DUF5532
Motif
Other DBs
NCBI-GeneID:
128073872
NCBI-ProteinID:
XP_052525088
LinkDB
All DBs
Position
Unknown
AA seq
1886 aa
AA seq
DB search
MANSTGKNHADQRRKGLAFLDELRQFHHSRGSPFKKIPVVGGKELDLHALYTRVTTLGGF
GKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEEDEEVQPGNPKP
QLPIGAIPTSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSAVFGEEWKEKTDRDFVKGSFLL
RQETNVEWTESNQASLLKSKKGDLGPSSRVKRRNRGCNLTLNLRCLNTFTQFWRDIVEDI
EVRDLISDRSKSQDIPSEDWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEEGNVK
LLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLM
SRDRFLKMRGMEILANLCKAEDNGVLICEYVDQESYKEIICHLTLPDVLLVISALEVLYM
LTEMGEVACTKISKVEKSIDTLVCLVSMDIQMFGPDALTAVKLIEHQCVSQQGVPDVRPP
MMDHGSSQAHAAGIAASRTAPHVAPPPGIVEIDSEKFACQWLNAHFEVNLDCSISRAEMY
SEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDPINNGQAHIHVVGVKRRAIPL
PIQMYYQQQPASSTPIVRVDSIPDMSSSPSPAGLPHGPQSVGNHYQRTPINQSSTLTATQ
MSFPIQGVHTVAQTVSRIPQNTVHAQQQNAPMTVIQNKGPIPGEVVKATVIQSSVPQSGV
PVTISVGGAPQASNQNHSSTGPQPSVAVVGSQTLLHHQPVIQQQSPLHAVVPGQIPSGTP
VTVIQQAVPQGHIFGRVQNIPACSSAVSQGQQLISTSSQPGQSSSQQSSAANQQQDTVII
APQQYVTTSAPNIVSATTVQNFQVAPGQVVAIAGVQNPPTSRVGFQNIAPKPLPSQQVPP
NVQQPMQTQQQPPQPASQQSVVIVSQPAQQGQTYAPAIHQIVLANPASIPPGQTVQLTGQ
PSITPSSSPSPGPVTNNQVPTVMSSSSTPSQSQGPPPTVSQMLSVKRQQQQQQQQHSPAS
SQQQVQPPMQMQVQSPQANTGVGQPNSGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPP
NNARAPSPQVVYQMANNQTPGFGVQGQSSAQQLLVGQQLVQGAVQPQGAVQTVPISNLQI
LPGQLISNSPATIFQGTTGNQVTITVVPNTSFATATVSQGNATQIIAPAGIAVSGAQTGV
GLQMQTLPATQAPSAGQSPCTAAPPFKGDKIICQKEEEAKEATGLHIHERKIEVMENPSC
RRGAANTSNGDAKENEMQVGSLLNGRKYSDSSLPPSNSGKTQNEANQCSQVSNGPSLEMG
ENGAPGKQNFEQMDTQEIKSDLKKPLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEIS
SVEQQGNLDATQQDTAKGDQGERISNGPVLTLSSSPVVSGTQEAAKLLTQQLSGTNTDLP
NGPLASSLNSDVPQQRPSVVVSPQSTASVIQGHQIIAVPHSGPRVSQSTLSSEVRSTNGT
AECKIAKRPAEDNDRETVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVA
IESAVQQKQQQPTTYIQSMVTQSTPATSIPTVQVQGQQLNLQPPSYTAASQHAEQMKKPG
QNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDK
HCSRDALLAGLKQDEPGQGGIQKPSNKQPVVGSTAATPRAQKAIVNHPSAALMALRRGSR
NLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENHLSVLAISNMEASS
TLAKCLYELNFTVQSKEHEKDSEMLQ
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacgggtaaaaaccacgcagaccagcggagaaagggactcgctttcctg
gacgagctgcggcagtttcaccacagcagagggtctccttttaagaagatccctgtggtg
ggtgggaaggagctggatcttcacgctctctacaccagagtcaccactttaggcggattt
gggaaggtctctgagaagaaccagtggggtgagatcgtggaggagttcaactttcccaga
agttgttctaatgctgccttcgctttaaaacagtattacttgcgttatctagaaaagtat
gaaaaagtccatcattttggggaggaggatgaggaggtacaaccaggcaatccaaagcca
caacttcccattggtgcaatcccaacttcctataactaccagcaacacagtgtgtcagat
taccttcgtcaaagctatgggctgtctatggactttaactcaccaaatgattataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggattttgcaattaatgtatgt
actcttctttcaaatgaaagcaagcatgtcatgcagcttgaaaaggaccctaaaatcatc
acgttactgcttgctaatgctggggtatttgatgacactttaggatcgttttctgctgta
tttggagaagaatggaaggagaaaactgatagagattttgttaagggatctttcctgctt
aggcaggaaacaaatgttgaatggactgagagcaatcaagccagtctgcttaaatccaaa
aaaggtgatttaggaccctcttcccgtgtaaagagaaggaatagaggctgcaatctcact
ctgaacttaagatgtctcaacacctttactcagttttggagggatattgttgaggatatt
gaagtacgtgacctaatttctgacagaagcaaatctcaagatattccatcagaagattgg
atttgggaatccttatttcatccacctcgcaaactgggcattaatgatatcgaagggcag
cgggtcctgcagattgcagtgattttacgtaatctttcttttgaagagggaaatgttaaa
cttctggcagctaatcgtacttgtcttcggttcctgctactctctgctcatagtcatttt
atttctctgcggcagttggggcttgacacgctgggaaatattgcagcagagcttctcttg
gatcctgttgatttcaaaactactcatctaatgtttcacactgttacaaaatgcctcatg
tcaagggatagatttttaaaaatgagaggcatggaaatcttggcaaatctttgtaaggct
gaagataatggtgtcttaatctgtgaatatgtggatcaagagtcgtacaaggagatcata
tgtcatctcacactaccagatgtgctgcttgtaatctcagcacttgaggtgctatacatg
ctcacagaaatgggagaagtagcctgcacaaagatttctaaagtagagaagagcatagat
acgctagtgtgtctggtttctatggacatccaaatgtttgggcctgatgcacttactgct
gttaagctcattgaacatcagtgtgttagccagcaaggagtacctgatgtcagaccaccc
atgatggatcatggttcttcacaggcacatgcagcaggtatcgcagcctctagaacagca
ccacatgttgctccaccacccggaatagtagaaatagacagtgagaaatttgcatgtcag
tggttgaatgcccattttgaggtgaatcttgattgctcaatctctcgagcagaaatgtac
tctgaatacctctctacgtgtagtaaattagctcgaggtggaatcctaacatcaactgga
ttttataaatgtctgcgaactgtctttccaaatcatacagtgaagagagtagaagatccg
attaacaatggtcaagcacatatacatgtggtaggagtgaagaggagagctataccactt
cccattcagatgtactatcagcagcagccagcttcgtctaccccaattgttcgggttgat
tcaattcctgacatgtcttcgtctccttcgccagcaggactcccacacgggccacaaagc
gtaggaaatcattatcaaaggacccctattaaccagtcttcaactttgacagcaacacag
atgtcttttccaattcaaggtgttcatactgtggcacagactgtttctagaattccacaa
aatactgttcatgcacagcagcaaaatgctccaatgactgttatacagaataaaggtcca
atacctggtgaagttgtgaaggccacagtaatacagagctctgttccccagtctggcgtt
cctgttactatttctgtaggaggagcaccacaagcttcaaatcaaaatcacagcagtaca
ggaccacagccgtccgttgctgttgttggctctcagacgttgcttcaccaccaacctgta
attcaacagcagtctccactgcatgcagtggtaccaggacagataccttcaggcactcct
gttacagtaattcagcaagctgtacctcagggtcatatatttggcagagtacaaaacata
ccagcatgcagttcagcagtttcacagggccaacagctgatcagcacatcatcgcaacct
gggcagtcatcatctcagcagtcctctgctgctaaccagcaacaagatacagtcatcata
gcaccacagcagtatgtcacaacctctgcacctaacattgtttctgccaccactgttcag
aatttccaagtagcacctgggcaggtggttgcaattgcaggcgtccagaacccaccaact
tctagggtaggctttcagaacattgcaccaaagcctctgccatctcagcaagttccacct
aatgtacagcagccgatgcagacacagcagcaaccaccacaaccagcatcccagcaaagc
gtagtgattgtcagccagccagctcagcaaggtcaaacgtatgcaccagccattcaccaa
atagtgcttgctaatccagcttctattcctcctggtcagactgttcagttgactggacag
ccaagcattactccatcttcttcaccatctccaggtccggttacaaacaatcaagtccct
acagttatgtcatcttcatctaccccttctcagtcacaaggaccccctcctactgtcagc
cagatgctttctgtaaagagacagcagcagcagcagcagcagcaacattcaccagcatct
tcacagcaacaggtacaaccgccgatgcaaatgcaagttcagtccccgcaagctaataca
ggagttggccagcctaactctggtgaatctagtctgataaaacaattacttcttccaaaa
agaggcccctcaactccaggggggaagcttatactcccagctccgcagattcctccacct
aacaatgcaagagctcctagccctcaggtggtttatcagatggccaataaccaaacgcca
ggttttggagtacaagggcagtcttcagctcagcagctgctagttggacagcagctggtc
cagggtgcagtccagccccaaggggcagtacaaacagtacccatttctaacttgcagata
ttgccaggtcagttgatctcaaacagcccagcaactattttccaagggactactggcaac
caggttacgataacagttgtgccaaatacgagttttgctactgcaactgtgagtcaggga
aatgcaactcaaatcattgctccagctggaattgcagtgagtggggctcagacaggagtt
gggctacagatgcaaacgcttccagctactcaagcaccttcagctggacaatcaccgtgt
actgctgctcccccattcaaaggtgataaaataatttgccaaaaggaggaagaagcaaag
gaagcaacaggtttacacattcatgaacgtaagattgaagtaatggagaatccttcctgc
cgaagaggagctgcaaacaccagcaatggggatgcaaaagaaaatgaaatgcaggtggga
agtcttttaaatgggagaaagtatagtgactccagtctacctccttctaactcagggaaa
actcagaatgaggccaatcagtgctcacaagtcagtaatgggccatcattagaaatgggt
gagaacggagctcctggaaagcagaactttgaacaaatggacacacaggaaattaaaagt
gatttgaagaagcccctagttaatggaatctgtgattttgataaaggcgatggttctcat
ttgagcaaaaacattccaaatcacaaaacttccaatcatgtaggaaatggtgagatatct
tcagtggaacaacaagggaatttggatgccacgcagcaagatactgccaaaggtgatcaa
ggggagagaatttctaatgggcctgtattaactttgagtagttcacctgttgtaagcggt
acacaagaggctgcaaaactgttaacccagcaacttagtggtaccaacactgatttacct
aatggacctctagcttcaagtttgaattcagatgtgcctcagcaacgcccaagtgtagtt
gtctcaccacaatctacagcctctgttatacaggggcatcaaatcatagcagttccacac
tcaggacctagagtgtcccagtctaccctgtcatccgaagttcggtctactaatggcaca
gcagaatgcaaaattgcaaagagaccagcagaggataatgacagggaaactgttccagga
attccaaataaagtaggagttagaattgttacaatcagtgaccccaacaatgctggttgc
agtgcaactatggttgctgtgccagctggagcggatccaagcactgtagcgaaagtagca
atagaaagtgctgttcaacaaaagcagcagcagccaaccacgtatatacaaagcatggtc
acacagagcacacctgcaacgtcgataccaacagtgcaagtacagggccagcagctcaat
ttgcagccaccttcatacactgcagcaagtcagcatgcagagcaaatgaagaaacctgga
cagaacttcatgtgtctatggcaatcttgtaaaaagtggtttcaaacaccatcacaggtt
ttctatcacgcagcaactgaacatggaggaaaagatgtctacccagggcagtgcttatgg
gagggatgtgaacctttccagcggcagaggttttccttcattacccatttacaggataaa
cattgttccagagatgctttgcttgctggattaaagcaagatgaaccagggcaaggagga
attcagaagccttccaataagcagcccgttgtagggagtacagctgctactcccagagca
cagaaggccattgtgaatcatccaagtgctgccctcatggcattaaggaggggatcaaga
aaccttgtcttcagagattttacagatgaaaaagagggaccaataactaaacacatccga
ttaacagctgccttaatattaaaaaatattggtaaatattcagaatgtggtcgcagattg
ctaaaaagacatgaaaatcatctatcagtgctagccattagtaatatggaagcttcctcc
acacttgccaaatgcctttatgaacttaattttactgtccagagtaaagaacatgaaaaa
gactcagagatgctgcagtga
DBGET
integrated database retrieval system
