Tympanuchus pallidicinctus (lesser prairie-chicken): 128073987
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Entry
128073987 CDS
T08967
Symbol
TSC1
Name
(RefSeq) hamartin isoform X1
KO
K07206
tuberous sclerosis 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04140
Autophagy - animal
tpai04150
mTOR signaling pathway
tpai04218
Cellular senescence
tpai04910
Insulin signaling pathway
tpai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128073987 (TSC1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128073987 (TSC1)
09143 Cell growth and death
04218 Cellular senescence
128073987 (TSC1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128073987 (TSC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128073987 (TSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
128073987
NCBI-ProteinID:
XP_052525395
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MAQQGNVGELLSMLDSPILGVLEDITAAFKDNLICDRGPMLVNSLVDYYLETNSQQALHI
LSTLQEPHDKHLLDKINEYMGKAATRLPTLSLLGHVIRRQPSWKHKLSQAPLLLSLLKCL
KTDTDVVVLTTGVLVLITMLPMIPQSGKQYLHDFFGIFGRLSAWCLQNPGHVAEIYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENLGTFEEVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKRLETHDVVIECAKISLDPAEASYEDGYYSASRKSCTNLKHHQTDPSASHYID
TQSSYGTSTPYSTPRLTLSQLPGQLPQILSPQSIKLSTEPQQVTIWSPSAVCGMTTPPTS
PGIVPSESSQSASQPYSKAFGTSAVGKGTPLGTPATSPPPCTSDDFVHVSLPSAAATPPK
KEDKPDSGRPSLYRQQNVISSDKSLDTSGSKSSVTLSDLPEFLGGLSFEDSAEKDREEDA
ISKEISEITTDAEHMVPRGGFDSPFYHTNENLSGSQKKTHSVVSSVQGHSLTSEPLISSL
DKPGPESVLETPKQTFTPIDKPCRGSGESPAGNREGTSGETSILTPSPCKASAQGRAVFG
SGQPPLYEHLFEVALPKTAYLFVGKKTEELLKKAKGTQDKDWMSSTSPVEVLDRLIQQGA
DAHTKELNKLSLPSKSADWTHFGGSPPSDEIHTLRNQLLLLHNQLLYERFKRQQHALRNR
RLLRKVIKATALEEHNAAMKDQLKLQEREIQALKLSLQKEQARYHQFQEEHESIVAQLHS
QIRQLQHDREEFYNQSQELQTKLEDCRTMIADLRLELKKANNKVCHTELLLSQVSQKLSN
SESVQQQMEFLNRQLLVLGEVNELYLEQLQHKHTDTTKEVEMLHAAFRKELEKAKLCVQQ
QSQRLDASQKRIAELESQLSKKDHLFLEQKKYLEDVKIKARGQLQAVESRYRAQKRITQA
FELEILNLFGRLENSPLKKLEDEKTEAAEAAEERLDCGNEGCADTVAGYSEETIDRNGET
KPPSTRGSSSSKGGSNSELSTPEKKQNQRFSSRWETSMLREPSSAVPLTVGSLPSSKSFL
GMKSRELFRNKSESQCDEHGVTINSLSDTLKTELCKDPSMETKAPPSPDNLSLSPKIQES
SVGQLHIMDYNETHHDHS
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaagggaatgttggtgagctcctctcaatgctggattctccaattctgggt
gttctggaagacataacagctgcattcaaagataatctcatctgtgaccgtggacctatg
cttgtgaacagcctggtggactattacttggaaaccaattctcagcaagcactgcatata
ctgtccacattgcaggagcctcacgacaagcaccttctggacaaaattaatgaatatatg
ggcaaagctgctactcgtttacctacactctcgctgctgggacatgtgataagaagacaa
ccatcgtggaaacataagctttctcaagcacctctcctgctctcattgcttaaatgtctc
aagactgacacagatgtagtagtactcaccacaggtgtcctagtgctaataaccatgttg
ccaatgattcctcagtctggcaaacagtacctccatgatttctttggtatctttgggcgt
ctctcagcctggtgcttgcagaatccaggtcacgtggcagagatttatcttgtccacctt
catgccagtgtttatgctctctttcatcggctttatggaatgtatccttgcaattttgtc
tcctttctgcgttctcactacagtatgaaggaaaacttggggacctttgaagaggtagtc
aagccaatgatggaacatgtgcgaattcatccagaattagtgactggatctaaggaccat
gaactggacccacgaaggtggaaaagactagaaactcatgatgttgtgatagaatgtgcc
aaaatctccctggaccctgcagaagcctcatatgaagatggctattactctgcgtctcgg
aaatcctgtacaaacttaaaacatcatcaaactgaccccagtgccagccattacattgac
acacagagcagctatgggacatctaccccatattccactcctcgactaacactatcacaa
ctgccagggcagctacctcagattctgagcccgcagtcaataaagctgtcaactgagcca
cagcaggttaccatctggagtccttctgcagtttgtggtatgaccactccaccaacctcc
cctggaattgtcccatcagagtcatcccagtcagcatcgcaaccttacagcaaagctttt
ggcacatctgcagtggggaagggaacacctttggggacaccagccacatctcctccaccc
tgcacttcagatgactttgtgcatgtctcacttccttcagctgctgccacacctcctaaa
aaggaggacaaaccagattctgggaggccttcactgtaccgacagcaaaatgtcataagc
agcgataaatcattggacacatctggtagtaaaagttcagtaaccttaagtgatcttcca
gagtttttaggcggtttgtcttttgaagatagtgctgaaaaggacagagaagaagatgca
atatctaaagagatctctgagatcacaaccgatgctgaacacatggtgcctaggggaggt
tttgactctccgttttaccacacgaatgaaaatctgtcgggttctcagaagaagacccac
tcagtagtctctagtgttcagggacacagtctgacctctgagcctttaatatcttctctg
gacaagcctgggcctgagagtgtgctggagacacccaaacaaacatttactcccatagac
aaaccctgcagaggctctggtgaaagccctgctggtaacagagaaggaacctctggggag
acgagtattctcactcccagcccttgcaaagcatcagcacaaggaagagcagtgtttggg
agtggacagcctcccctgtatgagcacctttttgaggttgcgttaccaaagactgcctac
ctctttgttggcaagaagactgaggagctgctaaagaaagccaagggaacccaggataaa
gactggatgtcctctacttctcccgtggaagtactggataggctgatacagcagggggca
gatgcacacactaaggaactgaacaaattgtctctgccaagcaaatctgctgactggact
cactttggaggttctcccccttcagatgagattcacaccctgcgtaaccaattgctgttg
ctgcacaaccagctgctgtacgaacgcttcaaaagacaacagcacgccctccggaaccgg
cgcctcttgagaaaagtgattaaagccacagcactggaggagcacaacgctgccatgaaa
gatcagctgaaattacaggaaagagaaatccaggccttgaaactgagtctgcagaaagaa
caggccaggtaccaccagtttcaggaggagcatgaaagtatagtggctcagcttcacagc
cagatcagacagctgcaacatgaccgtgaggaattctacaaccagagccaggaattgcag
accaagctggaagactgcaggaccatgattgcagatctgaggttagaattgaaaaaggct
aacaacaaagtctgtcacacagaactgctgcttagccaagtttctcaaaagctttccaac
agtgaatcagtgcaacagcagatggagttcttgaacagacagcttctggttcttggagag
gtcaatgagttgtacctggagcagctgcagcacaagcacacagacactacaaaggaggtt
gaaatgttgcatgctgcttttcgaaaggaactggagaaagcaaaattgtgtgttcagcag
caaagccaaaggctcgatgcttcccagaaacggatagctgaactggaatctcagctttct
aaaaaggaccacctcttcttggagcaaaagaaatacctggaggatgtcaaaatcaaagca
agaggtcagttgcaagcagtagaaagtagatacagggcccagaaaagaatcacccaggcg
tttgagctggagatcttgaacctgtttggccgactggagaacagcccactgaaaaaactt
gaagatgaaaaaacagaagcagctgaagcagcagaagaaaggctggattgtggtaacgaa
ggttgtgcagatactgtggcaggatacagtgaagagaccattgatagaaatggagaaacc
aaacctcccagcactcgaggtagcagtagcagtaaaggtgggagcaacagtgagctctcc
accccagaaaaaaaacagaaccagagattcagcagtcgctgggagacctccatgttgcgg
gagccctcctctgccgtcccactgactgtaggctcactccccagctccaagagcttcctt
ggcatgaagtcacgagagttgtttcgcaacaagagtgagagccagtgtgatgagcacggt
gtaaccatcaacagcctttctgatactctaaagactgaactatgtaaagatccaagcatg
gagacgaaggctcctccaagccccgataaccttagcctctcacctaagatccaggaaagc
agtgttggacagcttcatatcatggactacaacgaaactcatcatgaccacagttaa
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