Tympanuchus pallidicinctus (lesser prairie-chicken): 128073992
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Entry
128073992 CDS
T08967
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128073992 (TNRC6B)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128073992 (TNRC6B)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128073992 (TNRC6B)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128073992 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
128073992
NCBI-ProteinID:
XP_052525412
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MQTDEGEILEEGSPKVSEMEHEDFVMEGHGKTPPPGEENKQEKEQEREEQLMEDKKRKKE
DKKKKESAQKVTDQKTKVPEVTKPSLSQPVAASPIGNSPSPPVNGGNNAKRVAVPNGQPP
SAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPPTAPGANPNNAQPVT
GALLQSDSGTATDSTIGGAAASNYANSTWGPGASSNSGTNANPTHIWDKVIVDGSDMEEW
PCIASKDAESSSENTTDNNSASNPGLEKNTLPGSTTSNKGKGSQCQSGSAGNECNLGAWK
SDPKAKSVQSSNPAAESNNGLSNWRNLTGQDRIGSGSGFSNFNPNSNPSAWPALVQEGNS
RKGTSESDSGSSNAQISTVGQTSREQQSKMENAGVNFVSGREQAQIHNTDGPKNGNTNSL
NLSSPNPMENKGMPFEMGLGNPSRSTDTPSQSTGERKTGSVGSWGTARGSSGTDTVSGQS
NSGNHGNNGKDREDSWKGASVQKSNGSRSDSWDNNNRSTGGGSWNFGPQHANESKWGEGN
KLTSGVSQGEWKQLSGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNSQAPCWGR
SSSSAGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSN
TGWGQTQIKQDTVWDIEEMPRPEGKSDKGTEGWESSATQTKNSGGWGDVPSQSNQIKSGW
GELSTPTEWKDPKNTGGWNDYKNPNSSNWGGGRQEEKSSSSWNDSSSKDQGWGGRQPNQG
WSSGKNGWGEEVDQAKNSNWESAGNKPASGWGEGGQNEIGTWGNGANTGSASKGGWDDCK
RNSTWNETGRQPNSWNKQQQQQQQQQQETSGSWGPPPQTPSNGRPPNPNWNSGPQPAAPK
DEEPSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQAPREQSLPTP
MTSKSQASVWSKSTPPAPDNGTSAWGEPNETSPGWGEVDDTGASTTGWGNAPSNAPNAMK
SSSKSMQDGWGESDGPVTGTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTSWGQGGKKTQI
KCSLKGGNSDSWMNPISKQFSNMGLLSQTEDIPGNKMDLSVGGLPDKKFEVDKRAMNLGD
FNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKGGNHGLFGNSTAQSRGMHTPVQPLNPSPN
IRAQVPPQFLSPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQ
LLLQQQQQQQLLQSQRKLSQAVRQQQEQQIARMVSALQQQQQRQPGMKHSPSHPVGPKPH
IDSMVPNPLNVGLSDLQSKGQIPGYGSGFGSSSMDYGMVGGKEAGTESRFKQWTMMEGLP
SVASQDANMHKNGAIVPPGKARGGSPYNQFDIIQGDPLGGHAGPAGDSWLPAKSPPTSKI
GSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTT
GSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFSDYKSTWSPDPIGHNPTHLSNKMWK
NHISSRNTTGLPRPPPGLTNPKPSSPWNSTAPRSVRGWGAQDSRLASGEKNHLITPLIRP
EECVFYSTNGLEERKLQLPASTWSDGGSSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPL
LTFHLNLTQGTALIRYNTKQEAAKAQTALHMCVLGNTTILAEFATDEEVSRFLTQAQPPT
PAATPSAPAAGWQSLETGQNQTDPVGPALNLFGGSTGLGQWSSGGGGSSGGDLTGASLWG
PPNYSSSLWGVPSVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgatgagggagaaatactggaggaaggcagccccaaggtcagtgagatggaa
catgaggattttgtaatggaggggcatggcaagactccacctcctggtgaagaaaacaaa
caagagaaggagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaggag
gataagaaaaagaaggaatctgctcagaaggtcacagatcaaaaaaccaaagtgcccgaa
gtgacgaaaccaagtttaagccaaccagtggctgccagcccaattggcaactctccatcg
ccaccagtcaatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgcca
agcgccgcccgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccac
aaagtgttactgaaacgtgggcagccccctccaccatcctgtatgctccttgggggtgga
gcagggcctcctcccccgacagcaccaggagcaaaccccaacaacgcacaaccagtgaca
ggagcactgctgcagagcgacagtgggactgcaacagattcaacaattggaggtgctgct
gcttcaaattatgcaaattccacttggggtcctggagcctcctccaacagcggcaccaac
gccaacccaactcacatctgggacaaggtgattgtagacgggtctgacatggaagagtgg
ccttgtatcgccagcaaagatgctgagtcttcttccgaaaacaccaccgataacaacagt
gcctcgaaccctggcttggagaagaacactctgccaggaagcaccactagtaacaaagga
aaaggaagccagtgccagtctggaagcgctggaaatgaatgtaatcttggggcctggaaa
tctgatcccaaggctaaatctgttcaatcttccaaccctgctgccgagagtaacaatgga
ctaagtaattggaggaacttgactggacaagatagaattggttctggttctggcttcagc
aactttaacccaaatagcaacccgtctgcttggccagcactggtccaagagggcaattct
aggaaagggacttcggaatctgatagtggtagctccaatgcacagattagcacagtaggt
cagacctctagggaacagcagtcaaagatggaaaatgcgggtgttaactttgtctctggc
agagaacaggctcaaattcataacactgatggaccaaaaaacggaaacactaactccttg
aacttaagttcaccaaaccctatggagaataagggaatgccctttgaaatgggcttgggg
aacccttccaggagcactgacaccccttcacaaagcactggagaaagaaagactgggagt
gttgggtcttggggtacagctagggggtcttctggaactgacacggtctctggacagagc
aattctggaaaccatgggaacaatggaaaggatagggaggactcctggaaaggagcttct
gttcaaaaatctaatgggtcaagaagcgattcttgggataacaataaccggtctacgggt
ggtgggtcttggaactttggccctcagcatgcaaatgaaagcaaatggggtgaagggaac
aaattaacatctggggtctctcagggagaatggaaacagctgtctgggtctgatgaactg
aagattggagaatggagtggtccaaaccaaccaaattctagcactggagcatgggacaat
caaaaaggccaccctcttcctgaaaaccaaggcaattcccaggctccctgttggggaaga
tcttccagctctgcaggaagtgaggttggaggtcaaagcactggaagcaaccacaaagca
ggaagtagtgacagtcacaattctggacgccgatcatataggcctacacatcctgattgc
caggcagtcttgcagactttgctgagcaggactgatttggacccccgagtgctttcaaac
actggctggggccaaacacaaattaagcaagataccgtatgggatattgaagagatgcca
cggcctgaggggaagtctgacaaaggaactgaggggtgggagagctctgccacacagaca
aagaactcagggggctggggcgatgtacccagccaaagcaatcaaatcaagtctggatgg
ggtgagctctcaaccccaacagagtggaaggaccccaaaaatactggaggatggaatgac
tataagaaccccaattcatctaattggggagggggaagacaagaagagaaatcatcatct
tcttggaatgacagctctagtaaggatcaggggtggggtggacggcagcctaatcaagga
tggtcttctggaaagaacggttggggagaggaagttgaccaagcaaaaaacagcaactgg
gaaagtgcaggaaataagccagcatctggttggggtgaaggtgggcaaaatgagattgga
acttggggtaatggtgcaaatacaggctctgcttcaaagggtggttgggacgattgtaaa
agaaattcaacgtggaacgagacgggtcgacagcccaactcctggaacaagcagcagcag
caacaacagcagcagcagcaggagacttctggttcctggggtccaccgccacaaactcca
agtaatgggcgacctccgaacccaaactggaacagcggaccacaaccagctgcccccaaa
gacgaggagcctagtggctgggaagaaccttctccacagtcaatcagtcggaaaatggat
attgatgatggcacttcagcgtggggagatcctagcagttacaactacaagaatgtgaac
ctgtgggacaagaactcacaaggaggacaggccccacgggaacagagcctgcctactcca
atgactagcaaatcacaagcatcagtctggagcaaaagcactccgcctgctccagataat
ggtacgtccgcctggggtgagccaaatgaaaccagtcccgggtggggtgaagtagatgat
acaggagcatcgacaacaggctgggggaatgcaccttccaacgccccgaatgccatgaaa
tctagttctaaatctatgcaagatggctggggagagagtgatgggccagtaacaggcacg
cgtcattccagctgggaagaggaggaggagggaggagtctggaacacagcaggctctcag
ggaagcagttcctcccacaactcaacaagctgggggcaaggaggaaagaaaacacagata
aagtgctcattaaaaggaggaaatagtgattcatggatgaaccccatatccaaacagttt
tcaaatatgggcttgctaagtcaaactgaggacattccaggcaataagatggacttgtct
gtaggtggtctcccagataagaagtttgaggtagataaacgagccatgaatctcggggat
tttaatgacataatgagaaaggatcgatctgggttccgtccacctaattccaaagacatg
ggaaccacagatagtgggccttattttgagaagggtggcaatcatggtttgtttggaaac
agcacagcacaatcgaggggcatgcacacaccagtgcagccactaaatccttcccccaat
atccgggcgcaagtgcctccccaatttctttctccccaggtttcggcctccatgctcaaa
cagttccccaacagtggcttgaatccaggtcttttcaatgtggggccccagctttctccg
caacagattgccatgctgagccagcttccacagattccccagtttcaattggcgtgtcag
ctcctccttcagcagcagcagcagcagcagctgttacagagccagaggaagttatctcaa
gctgtgcgacagcagcaggagcaacagattgctcgtatggtgagtgccctccagcagcag
cagcagaggcagcctggcatgaagcattcaccatcccaccctgttgggcctaagccacat
atagacagcatggtacccaatcctttgaatgtaggtctttcagatttacagagcaaagga
caaatacctggatacggttcaggctttggctcaagcagcatggattatggcatggtggga
gggaaagaagctggaacagaatcccgctttaaacagtggactatgatggaagggctgccc
tctgtggcttcacaagatgccaatatgcacaaaaatggtgcaatagtgccccctggaaag
gctcgcggaggatcgccctacaaccagtttgacataattcagggcgacccgctgggtggc
catgcaggccctgctggtgatagttggttacctgccaaatctccgccgacgagcaagatc
ggaagcaaatccagcaacgccagctggcctccagagttccaaccaggagtgccatggaaa
ggtatacaaaacattgaccctgaatctgacccctacgtgacccctggaagtgtgctgggg
gggacagccacatctcccattgtagatactgaccaccaacttctgcgggacaacaccaca
gggtctaattcttccctcaacacctcgctgccttcacctggtgcctggccctacagtgcc
tctgacaattccttcaccaacgttcatagcacttcagcaaaattcagtgattacaaatca
acatggtccccagatcccataggacacaatcccactcatctctccaacaagatgtggaaa
aaccatatttcctcaaggaacactacagggctgcctcgcccgcctcctggcctgaccaac
cccaaaccatcatctccatggaacagcacagcaccccgatcggtcaggggctggggggca
caggactcaaggcttgcctctggtgagaagaatcatctgataacgccattgatcagacct
gaggagtgtgtgttttacagcactaatggtttggaggagagaaagttgcagttgcctgca
tctacttggagtgatggtggtagctcagttcgtcctagttactggctggttcttcacaat
ctcactccacagatcgatggctcaaccttgaggacgatctgcatgcagcatggcccactg
ctgacattccatctgaacctgacccagggcaccgctctcatccgatacaacaccaaacag
gaggcggccaaggcccagactgcactgcacatgtgtgtgttgggaaacactaccatcctg
gctgagtttgccacagatgaggaggttagtcgctttttgacacaggctcagccccctaca
cctgcagcaaccccaagtgcacccgcggcaggctggcaatccctggagacgggacagaac
cagacagatccagttggacctgctttgaatctctttggtgggtcaacagggcttgggcag
tggagcagtggtggcggcggcagcagtgggggtgatctcactggcgcttcgctgtggggg
cccccaaactattcttcaagcttgtggggggtcccgagcgtagaggatccacacagaatg
ggcagccctgctcccttactacctggagaccttctgggaggagggtcggattcaatctga
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integrated database retrieval system
