Tympanuchus pallidicinctus (lesser prairie-chicken): 128074098
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Entry
128074098 CDS
T08967
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128074098 (GAPVD1)
Membrane trafficking [BR:
tpai04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128074098 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
128074098
NCBI-ProteinID:
XP_052525596
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPVQQEKLFGEKGT
EKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRMKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSSVNLLEGLSRTVVYMTYSQLTTLVGF
MRNVMLSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
ATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGAGPQITPGMMSENEVLNMQL
ADGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAV
VRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHALIPTDLEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPGWNRRPGNEERELPAPGAAVLMATSQSSSSSPSKDSSRGEMDER
KDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDMVPDRYSTLQDDPSPRLS
AQAQAAEDILDKYRNAIKRTSPSEGALVNYDSGETTGDGESVHDSPRDEALQNMSADDLP
DSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEIVCF
LKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCR
QGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDK
TAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRD
QVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMC
STIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWW
MQFTAAVEFIKTIDDRK
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggatatacacacactggctcatcacctcaagcaggaacgactgtatgta
aactcagaaaagcaacttattcagaggctgaatgcagacgtgttgaagacagctgaaaag
ctgtaccgcacagcatggatttccaagcagcaacggattaacttggacagactgatcata
acaagtgcggaagcttctcctgctgaatgctgtcagcacgctaaaatcttggaggataca
cagtttgtggatggatataagcagttgggatttcaggagactgcttatggagagttccta
aacagactgagagagaaccctaggcttattgcgtcctgtctggttgctggagagaagctc
aaccaggacaacacccagagtgtcattcacacggtctttacctccatttatggaaactgc
atcatgcaggaggatgagagctacctcctgcaggtccttcgttacttgatcgagtttgaa
cttaaggaaagcgacaaccctcggcggctgttgagacgaggcacttgtgcgttcagcatc
ttattcaaacttttctctgaaggacttttttctgcgaaactctttcttactgcaacttta
catgagccgatcatgcagcttctggttgaagatgaagatcacctggaaactgatccaaac
aaattaattgagagattctctccagtccaacaggaaaagttgtttggagagaaaggcaca
gaaaaatttaagcaaagagtccaagaaatggttgactccaatgaggcgaagctggtgacg
ttggtgaacaaattcattggctatctgaaacaaaatacgtactgttttccacatagcttg
cgatggattgtgtcacaaatgtacaaaacgctctcgtgtgtagacagactggaggttggg
gaggtcagagcaatgtgcacagacctccttctagcatgtttcatctgtcctgcaattgtt
aatccagaacagtatgggataatttctgatgcacctataaacgaagtggcgagatttaat
ctgatgcaggttgggagacttctgcagcagttggcaatgacaggttctgaggagggagat
ccacgtatgaagagcaaccttgctaaattcgacaaaagctgtgttgcagctttcctggat
gtcgttattgatgggcgtgcagttgaaactcctcccatgtcttctgtcaaccttctggag
gggctgagtagaacagtggtttacatgacgtacagccagctaactactctggttggtttc
atgcgaaatgtaatgttgagtgatcaacttaaggaagatcggatggctttggaaaacttg
ctagcaaacttaccccagaacaagccagggaaaagtagcagcctagaaatgacgccgtac
aataccccacagctctctcctgcaactactccagctaacaaaaaaaatcgattaccgata
gcaactcgtagcagaagtaggtcaaatattctcatggatcagcatggggatcatgaaggg
tcctcccaggaaaccatcccagaagttcagccggaagaagtgctggtgatttctctggga
gccggaccacagattactccaggaatgatgtcagaaaatgaggtcctaaatatgcagctt
gcagatggtggacaaggagatgtccctgttgatgaaaacaaactccatggtaaacctgat
aaaaccttgcgcttttcactctgcagtgataatctggaaggaatatctgaaggtccttca
aatcgctccaactcagtgtcctccttggatttggaaggggagtctgtatcagagcttggt
gcaggtccctctgggagtaatggtgttgaagctctgcagctgctggagcacgaacaagcc
acaactcaggataatcttgatgacaagctccgtaaatttgaaatccgtgatatgatgggg
ttgactgatgacagagacatatcagaaactgtgagtgaaacgtggagtacagatgtcttg
ggtagtgactttgatccaaatattgacgaagatcgtttacaagaaattgcaggtgcagct
gcagagaacatgctaggcagcttgctgtgtttaccaggttcaggatccgtgttgcttgat
ccttgcacaggttcaaccatctcagaaaccacaagtgaggcctggagtgtggaagtatta
ccaagcgattcagaagccccagatctaaaacaggaggaaaggctgcaagaactggaaagc
tgttctgggctgggtagcacatcagatgacacagatgtaagggaggtcagttctcgaccc
agtacaccaggcctcagtgttgtatcaggtattagtgcaacatctgaagatattcctaac
aagattgaggatctcaggtctgaatgtagctctgactttgggggaaaagattctgtgaca
agtcctgatatggatgaaacagcccatggagccagtcagttgacatctcctccttctcag
acagattctttgcttgcactgtttgaccctttgtcatcgaatgagggtgtgtcagccgtt
gtacggcctaaagtacattatgcaagaccgtctcacccaccaccagacccaccaattttg
gaaggagctgtgggaggtaatgaggctcgattaccaaactttgggtctcatgctttaatt
ccaactgatttagaagcattcaagcagaggcactcttatccggaaaggctggtccgcagc
aggagttcggatatagtgtcatcagttcggagacctatgagtgatcctgggtggaacaga
cgtcctggtaatgaggagagggagcttccagccccgggggcggctgttctgatggctaca
tcccagtcatcgtcgtcatctcccagtaaggactcctctagaggagagatggatgaacga
aaagacagcgatgatgagaagtctgacagaaacaaaccgtggtggagaaaacgctttgtg
tctgccatgcccaaagctccaattccatttagaaagaaagaaaagcaggaaaaagacaaa
gatgatatggtacctgacagatactcaacactacaagatgatccgagcccgaggctcagc
gctcaggctcaagctgcagaagatattctggacaaatacaggaatgcaattaagcgaacc
agtcctagtgaaggagctttagtaaactatgacagtggagagactacaggggatggtgag
agtgtccacgactctccacgtgatgaggctttgcaaaacatgtctgcagatgatctccca
gactctgcaagtcaagtagctcagccacaaagttctgctttctcctatagggatgcaaag
aagaaattgaggttggctctctgttcagcagattctgttgcttttccaatgttgacacat
tcaacgaggaatggtttaccagatcacacagatcctgaagataatgaaattgtgtgcttc
ttgaaagttcagctagctgaagctattaaccttcaagacaagaacttgatggcccagctg
caggaaacaatgcgatgtgtgagccgctttgataacaggacctgtcggaagctgctagcc
tctattgcagaggactacaggaaaagagctccatatattgcttatttaactcgatgtcgc
cagggcctgcagacaacacaggcacacttggaaaggctattgcaaagagttctgcgagac
aaagaagtggccaacagatacttcactacagtgtgtgtgaggttactgctagagagcaaa
gaaaagaaaatcagggagtttattcaagatttccagaaacttacagcagcagatgacaaa
acagcccaagttgaagattttcttcagttcttgtatggagcaatggctcaggatgccata
tggcagaacgccagcgaagaacagcttcaggacgcacagttagctatagagcgcagcgtg
atgaatcgtattttcaaacttgcattctaccctaatcaggatggagatattttacgtgac
caagtccttcatgagcacatacagaggttatctaaagtggtgactgcaaaccacaaagca
cttcagattcctgaggtgtatctccgggaggcaccgtggccatcagcacagtctgaaatc
cgtaccataagtgcttacaaaaccccccgagacaaagtgcagtgcatcctgcgaatgtgc
tcaaccattatgaacctgcttagcctggcaaatgaagattcagtgcctggggcagatgat
tttgttcctgttctggtctttgttcttataaaggcaaatccaccttgcttgctgtccact
gttcagtacataagtagtttctatgccaactgcttatctggagaagagtcctactggtgg
atgcagttcacagcagcagttgaattcattaaaactattgatgatcgcaagtaa
DBGET
integrated database retrieval system
