Tympanuchus pallidicinctus (lesser prairie-chicken): 128074452
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Entry
128074452 CDS
T08967
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128074452 (TAF1C)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
128074452 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
128074452
NCBI-ProteinID:
XP_052526267
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MEFPGVLFPSYFGCGPPKDEGGMAPAAGWGERGKVLEAGPGQRQVLPPFVPLRSHEGESW
APAEAAAVPLLPPNMGCWVPTVTPQDILYHGILHRKLRTGRSGAALDFAKQLGHFFVDHP
EDAFSSLGRLLHKNFYLGDSRLRKRSARDTTIRMTSLVENINHMEARRGCPQHQFTSRLR
LFSHLCRDWLFEVPLGLLADCVHEELLLQWTSLLFDDSSTGGALAWLPPQDASSRVGRLV
YPGGMAMNHLYFQDVVLEEQPRARGLPVQFELNGRIRQVAAARVDGQDFVGVRSDYHCGV
WRMPGKTGAAPSPLQVIHTDVPASCLTVSPYLSGELSVCTQSGAVYLWNIETGLQRLRHD
PQTLFFRDHSPWRWSDFTAHPRVLSCADRTGILCLDARAPTSCHFDFFKVGEEAKCEQGE
RVVLPMYLGRAHPCQHLVATQFAVYLLDERLPLVPVLKWSHMMKAPPLFADIVPGESGRS
HKALLGTSHTQELLLLQYTGGDQMACQLAGPPQQLHSIASCLPHLPTQLPHQHHLLQKRL
SIPAAGLAAVQHEQGEQESLLVFQLSEAGDVFYQMLRHEAAPSPVPDQGDETEPAPTPNK
EDEAAASPGSPILFGSEEEEQEEEEEQTFYLSNLEVIINDEEEEEEEVVTTPAATEEPEP
LARPKPAPDVPSAAAALRYRRWLRALLQAWMGSPASSCRSGPPTLSQRRLFTRKELSEMA
PSVLQQYQLQLRRAMCERGRIQRWEPAPEPPSPAPSLEPNALSARLTAAWRGEWGAVGPA
GSTLQRQQALRERRRRQKRSRAHRSLSASFTSSITYQSELSELSEGATPRTPPSTPREVV
VSSLPGTPPPPPTEILLSSQELRSRGIPKERRRTLRDYLSVWAEGPQDPPEAPSSITVQR
CIPSSQSQLSSSQSQLSSASQPRRKRPRMGF
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccgggagtgcttttcccttcttacttcggctgcggcccccccaaggacgag
gggggcatggctccagccgccggctggggagagcgcgggaaggttctggaggccgggccc
ggacagcggcaggtgctgccaccgtttgtgcctctccgcagccacgagggcgagagctgg
gcgccggccgaggccgcggcagtgccgctgctgccgcccaatatgggctgctgggtcccc
acagtcacccctcaggatatcctctaccacggtatcctgcacagaaagctgcggaccggg
aggtctggggctgcactggactttgccaagcagctggggcacttctttgtggatcacccc
gaggatgccttcagctccctggggcgactgctgcacaagaacttctacctgggagactcc
aggctcaggaaacgcagcgcccgggacacaaccatccgcatgacatccctggtggaaaat
atcaaccatatggaagccaggcgtggctgccctcagcatcaatttacctcccgcctgcgc
ttgttctctcacctgtgccgggactggctctttgaggtgcctctggggctgctggctgac
tgtgtgcatgaagagctgctgctacagtggaccagcctgctctttgatgacagttccaca
gggggagcactagcctggctgccccctcaggatgcaagcagtcgtgtgggacgcctggtg
taccctggcgggatggccatgaaccacctctatttccaggatgtggtgctggaggagcag
cctcgggcacgggggctaccagtgcagtttgagcttaatgggcgcatccggcaagtagct
gctgcccgggtggatgggcaagactttgttggcgttcgctctgactaccactgtggtgtt
tggaggatgccaggcaagacaggagctgcccccagcccactgcaggtcatccacactgat
gtgccagcctcctgcctcactgtcagcccatacctgtctggggagctgtcagtctgcacc
caaagtggagccgtctatctgtggaacattgagacagggctgcagcgtctccgccatgac
ccccagaccctgtttttccgggaccactcaccctggcgctggagtgacttcactgctcac
ccgcgggtgctgagctgtgctgaccgcactggcatcctgtgcctggatgctcgggccccc
acgagctgccacttcgacttcttcaaggtgggtgaggaagccaagtgcgagcagggtgaa
cgcgtagtattgcccatgtacctgggtagggctcacccctgccaacacctcgttgccacc
cagtttgccgtgtacctgctggacgagcgcttgccattggtgcctgtgctgaaatggtca
cacatgatgaaagcaccccctctgtttgctgacattgttccgggggagtctggaaggagc
cataaagcgctgctgggcacctctcatacccaggagctgctgctgctgcagtacacaggg
ggcgaccagatggcctgccagctcgcagggccaccacagcagctacacagcattgccagc
tgcctacctcaccttcccacacagctcccacaccagcaccacctgctccagaagcgcctc
agcatccctgcagctggtctggctgctgtgcagcatgagcagggtgagcaagagtccctt
ctggtgttccaactctccgaggcaggtgatgtcttctaccagatgctgaggcacgaagca
gcaccctcacctgttcctgaccagggggacgagacagaaccagctcccactcccaacaag
gaggatgaggccgcagcatcccctggctctcccattctgtttggcagtgaggaagaggaa
caggaggaggaagaagagcagaccttctacttgtccaatctagaggtgataatcaatgat
gaagaggaagaggaagaggaggtagtgaccacgccagcagccactgaggaacctgagcct
cttgccaggcccaagccagccccagatgtgcccagtgcagctgcagctctgcggtaccgc
cgctggctgcgggcactgctgcaggcatggatgggctccccagcatcctcctgccgatca
gggccccctaccctcagtcagcggcgcctcttcacccgcaaggagctgtcagagatggca
ccaagtgtcctacagcagtaccagctgcagctgcgccgggccatgtgtgagcggggccgc
atccagcgctgggagccagccccagaacctcccagcccagcaccctccttggaacccaat
gccttgagtgccaggctaacagcagcatggagaggcgagtggggggccgtggggccagct
ggcagcaccctgcagaggcaacaagcgctgcgggaacgacggcggaggcagaagcgcagc
cgggctcaccgcagcctctcggccagcttcacctcctccatcacctaccagtctgagctg
tccgagctcagcgagggggccactccccgcactcccccgtccaccccacgggaggtggtg
gtgtcctctctgcccggcacccccccaccgcctcccaccgagatcctgctgtcctctcag
gagctgcgatcccgcggcatccccaaggagcgtcggcgcacgctgcgggactacctgtcc
gtgtgggccgagggcccgcaggatccccccgaggcccccagcagcatcacggtgcagcgc
tgcatcccctcctcgcagagccagctctccagctcacaaagccagctctcctctgcctcg
caaccgcgtcgcaagcggccccgtatgggcttctga
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