Tympanuchus pallidicinctus (lesser prairie-chicken): 128074518
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Entry
128074518 CDS
T08967
Symbol
TRIM23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128074518 (TRIM23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
tpai04031
]
128074518 (TRIM23)
Enzymes [BR:
tpai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128074518 (TRIM23)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128074518 (TRIM23)
GTP-binding proteins [BR:
tpai04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
128074518 (TRIM23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arf
Roc
Ras
G-alpha
SRPRB
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
MMR_HSR1
zf-RING_2
zf-C3HC4
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
128074518
NCBI-ProteinID:
XP_052526403
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MAALAVNKAGTGPDGSRGASNNRGPAGAAVKVLECGVCEDVFSLQGDKVPRLLLCGHTVC
HDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGPPGQCGTAEEA
IGLSGESIIRCDEDEAHVASVYCTVCATHLCADCSQLTHSTKTLAKHKRVPLADKPHEKT
MCSQHQVHAIEFVCLEEDCQASPLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHC
IRTFTEEISDYSRKLVGIVQHIEGGEQIVEDGVGMAHTEHVPGTADNARSCVRAYFSDLH
ETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVLA
KQEITRLLETLQKQQQQFTELADHIQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGAG
KTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVV
FVVDSSHRDRVSEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEELTELLSLHKLC
CGRNWFIQGCDARSGTGLFEGLDWLSRQLVAAGVLDVA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctggctgtaaacaaggctgggacggggccggacggcagccgtggagctagt
aataaccggggcccagccggcgccgccgtgaaggttcttgagtgtggagtctgtgaagat
gtgttctctttgcaaggcgataaagttcctcgactgcttctgtgtggccatactgtctgc
catgactgcctcacccggcttccccttcatggccgggccgtccgctgtccttttgatcgg
caagttactgaattgggagattctggtgtctggggattgaaaaagaattttgctttgttg
gaactcttggaacggttgcagaatgggcctcctggacagtgtgggacagcagaagaagcc
attggtctatctggagagagtatcattcgctgcgatgaagatgaagcccatgttgcatct
gtttattgcactgtttgtgccactcacctgtgtgcagactgctctcagcttactcattct
acaaagacgcttgcgaaacataaacgtgtacctcttgctgataagcctcatgagaagacc
atgtgctcccaacaccaagtgcatgctattgagtttgtttgcttagaagaggattgtcag
gccagtcctctcatgtgttgtgtctgcaaagagtatgggaagcatcaaggtcataagcat
tctgtcttggaaccagaagcaaatcagattcgtgcatccattttagacatggcccactgt
ataagaactttcacagaagagatctcagattattccagaaaattagttggaatagttcag
catatagaaggaggagaacaaattgttgaagatggagttggaatggcccatacagaacac
gtacctgggactgcagacaatgctcgctcatgtgtccgggcctatttttcggatcttcat
gaaaccctctgtcgtcaggaggaaatggctcttagtgttgttgatgctcacgtgagagag
aagttgatttggcttagacaacaacaagaagacatgactatcctattgtcacaggtttca
accgcttgccttcattgtgaaaaaactttacaacaggatgactgcagagtagtgttggcc
aaacaggaaattacaagactgctagagacgttacagaagcagcaacagcagtttacagaa
cttgcagatcacatacagctggatgctagcatacctgtcacttttacaaaggacaacagg
gtacatattggaccaaaaatggaaattcgagttgtcactctaggattagatggagctggc
aaaacaactattttgtttaagttaaagcaagatgaattcatgcagccaattccaacaata
ggttttaatgttgaaacagtagaatacaagaatctgaagtttactatttgggacgtagga
ggaaaacacaagttgaggcccttgtggaagcattattatctcaatactcaagcagtggtg
tttgttgttgatagcagtcacagagacagggtcagtgaagcacacagtgaacttgcaaaa
ttattaacagagaaggagttacgagatgccttgctcttgatctttgctaataaacaggat
gtagcaggtgcgctttcagtggaagaacttacagaactgttgagtctccacaaactctgc
tgtggccgtaactggtttatccagggctgtgatgctcgaagtggtacaggactttttgaa
ggactagactggctttcaaggcaattagtggctgctggtgtcctggatgtggcttaa
DBGET
integrated database retrieval system
