Tympanuchus pallidicinctus (lesser prairie-chicken): 128074552
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Entry
128074552 CDS
T08967
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128074552 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128074552 (NIPBL)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
128074552 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
128074552
NCBI-ProteinID:
XP_052526451
LinkDB
All DBs
Position
Unknown
AA seq
2783 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLIHSLNQVSTDHIELKDNLGSDDPEGDTPVLLQAILARNPNVFREKSMQNRYGVQS
GMMIPQFSISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTPHPQLQQACPIVTAGMRNLHENKVSSQLSGNSANHHADNSRHG
SNEDYLQMVHRLSSDDGDPSIRNAASFSLRSPQSVCSPAGSDGTPKGSRPPLILQSQPPP
YSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTLRLS
RVRSSDLDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCLPQH
EQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGTITSYDEVELDALAEIERIE
RESAIERERFSKEVQDKDKPLKKRKQENKPQEAGGAAGGNRPASQETGSAGNGARPALMV
SIDLQQAGRADSQATITQELEAIKKPEEIKQYNDGFVCIPQEETVGVLKLKPENHPEIFR
KKSEFEVQKTDIQQNENRQMEFQQNESRRLEIKYNDNKQVDAKYEIKHDSRQVEMKQNEN
RQAESKQNESRQMEMKQNEGKQNNGKQEIRQRPETPKQKSEGRPETPKQKSEVRPETPKH
RHDNRRDSSKPLSEKKIELSRHKPDMKSDTSKLKPDSRSDPVKQRPEGRSVSDAQRRDHD
SLKQRSEDRESERYRGDPSKIRRTEFLRSSNRNEHDSKYGIKSDGSKPEKFERKHRHDSG
ESRERFSSGDQKSDQKSRPDSPRVKQDGKGDSSKSRADKPGFRSPNSKDERRTDSSKSKV
ESNKAHPDNKAEFPSYLLGARSGALKHFVIPKIKRDKDGNVTQESRKTEFKGEQKDKVEK
IGLVEDLNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSSKSNKGSIDQSV
LKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRH
KKDRDEAWEYEEHDRRSSGDHRRSGHYHEGRRTSGSGRYRNRSPDDSDMDDYSPPPSLSE
VARKMKKKEKQKKRRAYEPKLTPEEMMDSSTFKRFIASIENILENLEDMDFTTLGDDDEI
PQELLLGKHQLNELGSESAKIKAMGIMDKLSTDKIVKVLNILEKNIQDGSKLSTLLNHNN
DTEDEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNT
LYPQYDPVYRVDPLGGGLLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLT
DTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSK
RSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSDEELNKKVDQDVLI
TNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSL
LGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQASGGEDD
IQQLQKALLDYLDENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDSSEGTHHA
KDVETTGQIMHRAESRKKFLRSIIKTAPSQFSTLKIYSDTVDYEDACLIVRYLASMRPFA
QSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARPDMQRGVHGRLMDNSTSV
REAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITE
MCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDW
FEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACIT
TLFLFSKIRPQLMVKHAMTMQPYLATKCSTQNDFMVICNVAKILELVVPLMEHPSETFLA
TIEEDLMKLIIKYGMTVVQHCVSCLGSVVNKVTQNYKFVWACFNRYYGALSKLKSQHQED
PNSTILTANKPALLRSLFTVGALCRHFDFDHEDFKGNSKVNIKDKVLELLMYFTKHSDEE
VQTKAIIGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTR
MQQADRDWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSNVRHFALNVIAL
TLNQGLIHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQV
QQAINTCPKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNM
LLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKERKPSSDEE
TESDSNTGSESESEEEASKPRRLRKRVDSDSDSDEENDINAVMKCLPENSAPLIEFANVS
QGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSD
MANSKITEEVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPK
NNAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELASQMNESVDVMDVIAICCPKYKDR
PQIARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSA
NKLTNKVVQTLRSLYAAKDGTSS
NT seq
8352 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtcttacc
gaccttttgaaccagctgcctcttccatcacctttacctgccacaacaacaaagagcctg
cttttcaatggacgaatagctgaagaagtgaactgccttctggcttgcagggatgaaaat
ctggtttcacagctcatccacagtctcaatcaggtgtcaacagatcacatagaattgaaa
gataaccttggcagtgatgatccagagggtgatacaccagttttgctgcaagctatcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatatggggtacaaagt
gggatgatgattccacagtttagtatttctcagaattctatgcgtggtagtccagcatct
tccaattatcaacaaaccactatttcacatagcccttccagccggtttgtgccaccacag
acaagctctggtaacagatttttggcacaacagaacagtccagtgcctagtccatatgct
cctcaaagccctgcaggatacatgccatattcacatcctccaagttacacaccgcatcct
cagctgcagcaagcttgtcctattgtcacagcagggatgaggaatctccatgaaaataaa
gtttcaagtcagttgtcgggaaattcagctaatcatcatgctgataattctagacatgga
tcaaatgaagactacctacagatggtgcacagattaagtagtgatgatggcgatccttca
ataagaaatgctgcatctttttccttgaggtcaccacagtcagtctgttctccagctgga
agtgatggaacccctaaaggatcaagaccacctttaatcctacaatctcagcctccacct
tattcatcacctagagatgttcccccagacatattgttagattctccagaaagaaagcaa
aagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaaaaagctgca
atgtatgatatcattagttctccttccaaggactccactaagcttacattaagactctct
cgtgtaagatcttcggatttggaccagcaggatgatatgctttctggtttggaaaacagc
agtgtgtcagagggtgatattccttttaatgtgcagtacccaggacagacttctaaaaca
cccgttactccacaggatgttaaccgcccactaaacgctgctcagtgtttgccgcagcat
gaacagacagctttccttcaggcacaacaagtgcctgttttacaacagaacacttcagtt
gctgcaaaacaacctcaaactcctgtggtacagacacagcaacaggtttcgcaacaagga
actataacgtcatatgatgaagtagaattggatgcattggctgaaattgagcggatagaa
cgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaagataagcct
ctgaagaagcgaaaacaagaaaacaaaccacaggaggctgggggtgctgctggaggaaat
aggccagcttctcaggagacaggttctgcaggaaatggggcaaggccagcgctgatggtt
agtattgatcttcagcaagcaggaagagcagactctcaggcaacaataactcaggaactt
gaggctatcaaaaaacctgaagagattaagcagtataatgatggatttgtgtgtattccc
caagaagagactgttggagttcttaaacttaaacctgaaaaccaccctgagattttcagg
aaaaagtcagaatttgaggttcaaaagacagatatccagcaaaatgagaacagacaaatg
gagtttcagcaaaatgagagcagaaggttggaaattaaatacaatgacaataaacaggta
gacgctaagtatgaaatcaagcatgatagcagacaagtggagatgaaacaaaatgagaac
agacaggcagagtcaaaacagaatgagagcagacaaatggagatgaaacaaaatgaggga
aaacaaaataatggtaaacaagaaataagacagaggcctgaaacgccaaagcagaagagt
gaaggcaggcctgaaacacccaagcagaagagtgaagtcaggcctgaaacaccaaaacat
agacatgataacaggagggattccagtaaaccattgtcagaaaagaaaattgaattatct
aggcataaacctgatatgaaatctgatacttcaaagctaaaacctgatagtagatcagat
ccagtgaagcaaaggcctgaggggcgttcagtttctgatgctcagagacgtgaccacgat
agccttaaacagagatctgaggacagggagtcagaaagatacagaggagatccatcaaag
attagaaggactgaatttttgagatcctcgaacagaaatgaacatgattctaagtatggt
attaaatctgatggttcaaaacctgagaaatttgaaaggaaacacagacatgactctggt
gaatcgagagaaagattttcttctggggatcagaagtcggaccagaagtcaagacctgac
agccctcgtgtaaaacaggatggcaaaggagattctagcaaatcaagagctgataaacct
ggttttaggtcacccaacagcaaggatgaacgaaggacagacagtagtaagagtaaagtt
gagagtaataaagcacatcctgacaataaagcagagtttcccagttatttgttgggggca
agatctggtgcactgaaacattttgtcattccaaaaatcaagcgtgacaaagatggcaat
gtcactcaggagtcaaggaaaactgaatttaaaggtgaacagaaggacaaagtagagaag
attgggctagttgaagacctgaataaaggagctaagcctgtagttgtccttcagaagctt
tctttggatgacgtacagaaatttattaaggatagagaagacaaatcaaggggctcttgt
tttaaacctaacaagaacaagtcgtccaaatctaataaaggtagcatagatcagtcagtg
ttaaaggagttgcctcctgagctcctggcagaaattgaatccaccatgcctctttgtgaa
cgtgtgaaaatgaacaaacgcaaacgtagcacagttaatgagaaaccaaaatatgctgaa
atcagttctgatgaagacaatgacagtgaagaagcttttgaatcttctcgaaaaagacat
aaaaaggatagagacgaagcttgggagtacgaagaacatgacagaagaagttctggtgac
cacaggaggagtggtcattatcatgaaggaagaaggacttctggtagtggccgttaccgt
aatcgcagtcctgatgactctgatatggatgattattctcctcctcctagcctcagtgag
gtggcaagaaaaatgaagaaaaaagaaaaacaaaagaagaggagagcttatgaacctaaa
ctaacacctgaagaaatgatggattcttcaaccttcaaaagatttattgcttcaatagaa
aacattttggaaaatctggaagacatggattttacaaccttgggtgatgatgatgagatt
ccacaggaattgcttctgggaaaacatcagcttaatgagttgggtagtgaatctgcaaaa
atcaaggcaatgggtatcatggacaagctctcaacagacaaaatagtaaaggtcctgaat
attttggagaagaatattcaagatggatcaaagctttctacgttacttaaccacaacaat
gacactgaagatgaggagaggttatggagagatcttataatggagagagtaacaaaatct
gcagatgcttgtcttactgctatcaatattatgacatcaccaaatatgcctaaagctgtc
tatattgaggatgtaatagaaagagttattcagtacacaaaatttcatttgcagaacact
ctctatcctcagtatgaccctgtgtatagagtggatcctcttggtggtggtcttttaagt
tcaaaagcaaaacgtgccaagtgttccacccacaagcaaagagttatagtgatgttatat
aacaaagtttgtgatattgtcagcagtttgtcagagttgctagagatacaacttcttact
gatacaaccattcttcaggtatcatctatggggataacgcctttctttgtagaaaatgtc
agtgaactacagctatgtgccatcaaattagtgactgcagtcttctccagatatgaaaaa
catagacaactaatactagaagaaattttcacttcccttgcaagactaccaactagcaag
aggagtttgagaaacttcaggttgaatagcagtgacacagatggagagcctatgtatatt
cagatggtaacagcactagttctacaactcattcaatgtgttgtgcacttaccatcagca
gaaaaagattctaattcggatgaggaattgaacaaaaaagtggatcaagatgtgcttatt
actaactcatatgaaacagccatgagaacagcacaaaatttcctttctatttttcttaag
aaatgtggtagtaaacaaggagaagaagattacaggcctctgtttgagaacttcattcaa
gatcttctttccactgttaataaaccagaatggccagctgcagagttgctgcttagctta
ctaggaagattattggttcaccagttcagtaataaatcaacagaaatggctttaagagtt
gcatcacttgactatcttggaactgtagctgcaagactgaggaaagatgcagtcactagc
aaaatggatcaaggatctatagctagaatcctcaaacaggcctcaggaggagaagatgat
attcaacaactacaaaaggctttattggattatctggatgagaacactgaaactgatgca
tcattagtgttttctcggaagttttatatagctcagtggtttcgggatacgactatggag
acagagaaggcaattaaatctcagaaggatgaggattcatctgaaggaactcatcatgca
aaagatgttgagaccacaggacaaatcatgcacagagcagaaagtcgcaagaagtttctt
cgcagtatcattaaaactgctccatctcagttcagtacattaaagatttattctgatact
gtggactatgaggatgcatgtttgattgttcgctacttggcctctatgaggccgtttgcc
cagagcttcgatatttatttaacacagattctgcgtgtacttggtgaaaatgcgattgct
gttcgaacaaaagccatgaagtgtttgtctgaggttgttgctgtagatcccagtattcta
gccaggcctgatatgcagcggggtgttcatggacggttaatggataactccactagtgta
cgggaagcagctgtggagctgcttggccgatttgtgctctgtcgtcctcagcttgctgag
cagtattatgacatgctgattgaaagaatattggatactggtatcagtgtcagaaaaaga
gtcataaagatacttagggatatctgcattgaacaaccaacatttcccaaaattacagag
atgtgtgtgaaaatgattcggagagtcaatgatgaagaaggcattaagaaattagtaaat
gagacattccagaagctgtggtttactccaactccacaccatgataaagaagcaatgact
aggaaaatactgaacatcactgatgtggtggcagcttgtagggatacagggtatgattgg
tttgagcagcttcttcaaaatctgttgaaatcagaagaggatgcctcatataaacctgtg
aagaaggcttgtactcaacttgttgacaatttggttgagcacatccttaaatatgaagag
tctttatcagattctgacaacaaaggagtgaattctggtcgcttggttgcttgtataacc
actctgttcttattcagcaaaatcaggccccagttaatggtcaaacatgccatgaccatg
cagccgtatctggccactaaatgtagtactcagaatgatttcatggtgatctgcaatgtt
gcaaaaatcttagagcttgtagtgccgctaatggagcacccaagtgagactttcctagcc
actattgaggaggacctcatgaaactcatcatcaaatatggcatgacagttgttcaacat
tgtgtgagctgccttgggtctgttgtgaacaaggtcacccagaattacaagtttgtgtgg
gcctgttttaatagatactatggtgcactttcaaaattaaaaagtcaacaccaagaagac
cccaacagcacaatacttactgccaataaaccagcactccttagatcacttttcactgtt
ggagcactgtgtcggcattttgattttgaccatgaagattttaagggcaacagtaaggtt
aacattaaggataaagtacttgaactgctgatgtattttacaaagcattcagatgaagaa
gtgcagacaaaagccattattggcctgggatttgcgtttatacaacacccaagcttaatg
tttgaacaggaagtaaagactctgtacaacagcattctttcagataagaactgttcagta
aacctaaaaatccaagtgttaaaaaacctgcagacctacttgcaggaggaggacacacgt
atgcagcaggcagacagagactggaaaaaagtagcgaaacaggaagacctgaaagaaatg
ggtgatatttcctcagggatgagtagttccatcatgcagctgtatctcaaacaggtcctt
gaggctttctttcatacccagtccaatgtacgccactttgctctaaatgtcattgcactg
acgttaaaccagggtctcatccatcctgttcagtgtgtgccatacttaattgctatgggc
acagatccagagccctctatgcgaaacaaagctgaccagcagttggtggaaatagacaaa
aagtatgctggtttcattcacatgaaagcagtggctggtatgaagatgtcttaccaggta
caacaggcaatcaatacctgtccaaaggatcccgtaagaggctttagacacgatgaatca
tccagtgcattgtgttcacacctatactctatgatccgagggaaccgtcagcacagacga
gcatttctaatttctttactcaatctctttgatgatactgcaaaaacagaggtgaatatg
ctcttgtacatagcagacaatctagcctgttttccttatcaaacacaggaagagccactg
tttataatgcatcatatagacattacactatcagtttctggtagtaacctactacagtca
tttaaagagtctatggtgaaagacaaaaaaaaggaaagaaagccttcatcagacgaggag
actgagagtgacagtaatactggcagtgagagtgaaagtgaagaggaagcttctaagcct
cggaggttacgaaaacgagtagattctgattcagattctgatgaagaaaatgatataaat
gctgtgatgaaatgtttaccagaaaactcagctcctttaatcgaatttgcaaatgtgtct
caaggcatattattacttttgatgctgaaacagcatttgaagaacctttgtggattctct
gatagtaaaattcagaaatattctccatctgagtctgcaaaagtttatgataaggcaata
aacaggaagacaggagtgcattttcatccaaaacaaactctggattttctgcggagtgat
atggctaattccaagatcactgaagaagtgaagaggagtatagtaaaacagtacttagat
ttcaagctccttatggaacatttggatcctgatgaagaagaagaagatggagaggtgtca
gctagcacaaatgctcggaacaaagcaattacctcgctgcttggaggaggcagccctaaa
aacaatgcagctgagacagaggacgatgaaagtgatggggaggatagaggaggaggcact
tcagggtcattgagaaggtcaaaacgaaattcagactctacggagttggcttcacagatg
aatgaaagtgttgatgtcatggatgtcatcgctatttgctgtccaaagtacaaagatcga
ccacaaattgcaagagtagtacagaaaaccagcaatggcttcagtgttcagtggatggca
ggctcctacagtggctcctggactgaggctaagcgccgtgatggccgcaaactggtgcct
tgggtagacactattaaagagtcagacattatttacaaaaaaattgctctaacgagtgct
aataagctgactaataaagttgttcagactttacgatcgctgtatgccgccaaggatgga
acttcaagctaa
DBGET
integrated database retrieval system
