Tympanuchus pallidicinctus (lesser prairie-chicken): 128074716
Help
Entry
128074716 CDS
T08967
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04512
ECM-receptor interaction
tpai04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128074716 (FREM2)
04518 Integrin signaling
128074716 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tpai04091
]
128074716 (FREM2)
Lectins [BR:
tpai04091
]
C-Type lectins
Lecticans
128074716 (FREM2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
128074716
NCBI-ProteinID:
XP_052526740
LinkDB
All DBs
Position
Unknown
AA seq
3166 aa
AA seq
DB search
MQALLAVPRRLPAGLLLLAGCVCLGLPEPLSPGRAAVSSPWAPEAAAPVVVANRGLRVPL
GRSAWLDPTRDLVLQVQPGDRCHLTVLDEDPLWQRPGRLSPRRFPCDFGPREVRYSHLGG
RSPARDRVRLQLRYDSPSRALVLPLVLEVEVLFTQLEIVTRNLPLVVERLRGTSSPLDAR
SLEFAFEPGRQRCRVGLLPSLTGLPRYGEILNYPTAVAMPAGGTVETAGGGPLPASMWDC
EEFLRLGLRYRHTAAGSSPNRDLVPLVAELWEAAGGGVPLKREYFQVLVRIRGGMENVAP
KPSFMAMLMMEVDQFVLTALTPDMLAAEDAESPPDLLLFNITSPFGPGQGHMVSTDDRSL
PISSFSQRDVRELRIAYQPPVEDSDRERLFELELEVLDPEGAASEPFAFVIVVKPMNTLA
PVVTRNTGLVLYEGQSRPLSGPGPSPNLVISDEDDLEQVQVSVVAGLRHGHLTLLEDTPA
SAAPRKHFTVAELAAGRVIYQHDGSESPLSDNLVLRLEDGGSRHHVEFLFPITLVPTDDQ
PPLLNANTGLAIAEGETVPITTRALSATDIDSQDAILLFTVESGPRAGQLLLRQAQPPPG
WEEEEEDEGFSWRKVPGVVGSSLIYEKPVREWLQQDIVEGRLFYHHFGPHSPGPGVVLDQ
FVFRVQDDNDPPNRSGPQTFVIRVHPVDRLAPELHSSSSLHLIVAEQQVTPLRRKHLCYT
DQDSGDRELRYTVTQPPTDTDSNHPPDEHGARLGSLVLTEDHSVEVTHFTQAQINHHKIS
YRPPQEELGVAPHLIQFHYQVEDAAGNAAEGTFTIYLQPVDNQPPEITNTGFALPEGGSH
VLSPTELDASDTDTELAHLRFILTQAPRYGQLQLSGYSLILGGAFGLEDIRQGRVVYVHS
GAETNSDTCSLDVSDGVHVVPITLKVNVHPVDDEVPTLRLAPGTVGSYLDVLENGAVEIT
ANVIQGTDEDTDDLMLTFIVEDPPQYGNILVQGVPAERFSQRDVLDGAVVYAHTSGEIGL
LPKEDTFNLTLSDLAEEWNIRGNVVQGVSVLVTILPVDNKAPEIFVGEQFRVMEGDKRVI
TPAHLRAEDVDTPSDDILCTIVAQSTSGYVENISPAPGSEKSRAGIAISAFTLKDLRQGH
IFYVQSIHKGVEPVEDRFAFRCSDGINFSQRHVFPIVIKPMNDEEPEIFVREFVVMEGMS
LVIDTPILNAVDGDVPADELTFTITRLPRHGHIVNQLVNGTVLAESFTLDQITESSNILY
EHDDSETREDNFEVKLSDGKHTTVKTIFIMVIPVDDETPRMAINDGLEIEIGETRTIHNR
ILKATDLDSEDKTLTYIIRYGPGQGFLQRLKPSGGVENISLGMNFTQDEVDRNLIRYMHF
GREGVRDLIKFDVTDGINPLIDRYFYVTVGSIDIVFPDVISKGVSLKEGGKVTLTTDLLS
TSDLNSPDENLVFTITRAPVRGHLECTDRPGVPISTFTQLLLAGNKIYYIHTSEDEVKMD
SFEFEVTDGYNPVFRTFRISISDVDNKKPIVTIHNLVVTENEYKLITPFELTVEDRDTPD
PLLKFVVTQIPIHGQIMFNNSKPVTTFTKQDLNENLISYKHDGTESVEDSFSFTVTDGTH
ADFYVFPNTVFETRRPQTMKIRIMAVDNSVPQIVTNKGAQTLRFLATGHIGFLITNKVLK
VEDRDSLHIALKIRITEGPRHGFLIHLGKGNHSISQFTQADIDDMKICYVLRAGDNATSD
IFHFTVEDSGGNKLKNQHFRLNWAWISLEQEYYLVNEDSKYLDVILKRRGYLGETSFISI
STKDGTAKKDKDFRGKAQKQVQFNPGQTLATWRVRILSDGEHERSESFQIVLSEPVMAVL
EFPSVSTVEIIDPGDESTVFIPQSTYTIEEDVGELFIPVRRSGDVSQELMVICYTQQGTA
TGTAPTSVLSYSDYISRPEDHNSVLRFDKDEREKTCRVVIIDDSLYEEAETFDVLLSMPM
GGRIGTEFASTRITIVPDKDDEPAFYFGNDEYYVDESAGYVEVRVWRTGTDLSKAASVTV
RSRKSESRTAEAGVDYVGISRNLDFAPGVTMQTFRVVILDDLGQPMLEGTEKFELVLRMP
MNAALGEPSKATIFINDSVSDLPKMQFKEPVYVVNENDGQISAMIYRSGDIQYTSTVRCY
TRQGSAQVMIDFEERPNTDSSIITFLPGETEKPCTLVLMDDTFHEEDEELRLVLGTPRSD
SSFGASIGEQNETLIKIRDDADKAIIKFGETKFSVSEPKDTRQVAVVKIPVIRLGDTSKV
SVVRVHTKDGSAISGEDYHPISEEIEFKEGETQHSVEIEVLFDGVREMREAFTVHLKPDE
NMVAEIQTAKAIVYIEEMNSMADVTFPSVPQVASLLIYDDTSRAKDRTSPVAGYPVICIT
ACNPKYEDFDKTGTICASEHINNTLTQYRWLVSAPTGPDGVTSPMKEVDFDTFFTSSKMI
TLDSIYFQAGSRVQCAARAVNSDGNEGLELMSPIVTISTSEGLCQPRVSGVVGAEPFSAK
LRYTGPEDPAYANLIKLTVTMPHIDGMLPVISTRELSNFELTLSPDGTRVGNHKCSNLLD
YTEVKTHHGFLTDATKNANVIGETIPYQYSPGIRGFNTLRFYRNLNLEACLWEFVSYYDM
SELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLQSELRLTFV
YDTAILWKDGIGSPPEAELQGSLYPTSMRISEEGRLVVNFKTEARFHGLFVMSHLASSLT
SMVMSADHPSLTFSLSLIRSEPTYNQPVQQWSFVSDFAVRDYSGTYTVKLIACTTAAHQE
YSLPVICNPREPITFDLDIRFQQVSDPVAAEFSLNTQMFLLSKKTLWLSDGSMGFGQESD
VAFSEGDVIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYNPSNTEYGCLADSPS
LLYRFKIVDKAQPETQATSFGDVLFNAKLAIDDPEATSLVKQPGSDGFKVDSTPLFQVSL
GREWYVHTIYTVRSKEKANRGIGKRSVEQQYHSLFSGGSTVASTQRRRKRGVVGAPELAK
DIGVENNRGTNIQHIALDRTSKKQVPQREVVVSGVLPRELNSQSSGVSVVTIIGGAAAIF
LAICLIAIIILLLKRRQNSEKEASKKSGSNEPMMLPDNYTSDSSEV
NT seq
9501 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctcttctcgccgtgccgcggcggctgccggccggcttgctgctgttggccggc
tgcgtgtgcttggggctgccggagccgctgtcgccgggcagagccgccgtctcctctccg
tgggcaccggaggcggccgctcccgtcgtggtggccaaccgcgggctgcgggtgcccttg
ggccgctccgcctggctggaccctacgcgggacctggtactgcaggtgcagccgggcgac
cggtgccacctcaccgtgctggacgaggacccgctgtggcagcggccgggccgcctgagc
cccaggcgcttcccctgcgatttcggtccccgcgaggtgcgctactcgcacctgggcggc
cgcagccccgcgagggatcgcgtccgcctgcagctgcgctacgactcgcccagccgcgcc
ctggtgctgccgctggtgctggaggtagaggtgctcttcactcagctggagatcgtcacc
cgaaacctgcccctcgtcgtggagcgcctgcggggcaccagcagcccgctggatgcccgc
agcctggagttcgccttcgagccgggccggcagcgctgccgggtgggcctgctgccttcg
ctgaccgggctgccccgctacggagagatcctcaactaccccacggccgtggcgatgccg
gcgggagggactgtggagacggcaggaggcggcccgttgcccgcctccatgtgggactgc
gaggagttcctgcgcctcgggctgcgctaccggcacacggcggccggcagctcccccaac
cgcgacctggtgccgctggtggccgagttgtgggaggcagcgggtggcggggtgccgctc
aagcgcgagtacttccaggtgctggtgcggattcgaggcgggatggagaatgtggcaccc
aaacccagcttcatggccatgctgatgatggaggtggatcagtttgtcctcaccgccctc
acacctgacatgctggcagctgaggatgctgagtcacccccagacctgctgctgttcaac
atcacctcgcccttcggcccgggccaggggcacatggtcagcacagatgaccggagtttg
cccatctcctccttcagccagcgcgatgtgagggagctgcgcattgcctaccagccccct
gtggaggattctgatcgggaacgtctgtttgagctggagctggaggtgctggatcccgag
ggggctgcatcagagcccttcgcctttgtgattgtggtgaagccaatgaataccctggca
cctgtggtgacccgcaacactggccttgtgctctatgaggggcagtcacggcctctctca
ggccctggtcccagccccaacctggtgatcagtgatgaggatgaccttgagcaggtgcag
gtgagtgttgtggcaggactgagacatggccacctcactctgctggaggacaccccagca
tctgccgctcctcgtaaacacttcacggtggctgagctggcagcaggccgggtcatttac
cagcatgatggcagtgagtctccactcagtgacaacttggtgctgcgactggaagatggt
ggctcccgacaccatgttgagttccttttcccaattaccctggtacccactgatgaccag
ccacccctactcaatgctaatacagggctggctatagctgagggtgaaacagtgcccatc
accactcgtgctcttagtgctactgacattgactcacaggatgccatcctgcttttcaca
gtggagtctggccccagagctggccaactcctgctccggcaagcacagccacctcctggc
tgggaagaggaggaagaagatgagggcttttcctggaggaaggtgccaggtgtagtgggg
agctcactaatctatgagaagccagtgagagagtggctgcagcaagacattgtggaaggg
cgtctcttttaccaccactttgggccacacagccctggccctggggttgtgttggaccaa
tttgtctttagggtccaagatgacaatgacccgcccaaccgctctggaccacagaccttt
gtgatccgagtgcatcctgtagacagattagcccctgagctgcacagcagcagcagcctg
cacttaatagttgcagaacagcaggtgactcccctgcggaggaagcacttgtgttacaca
gaccaggattcaggggaccgggagctccgctacacagtaacccagccccccactgacact
gactctaaccaccctccagatgagcatggagcccgccttgggtcccttgtgctgactgaa
gatcactctgtggaggttacccactttacacaagcccagatcaatcatcataagatctcc
taccgccccccccaggaagagctgggagtggctcctcatttaattcagtttcactaccaa
gtggaagatgcagctggcaatgcagccgaggggactttcaccatctacctgcaacctgtg
gataaccagcctcctgaaatcactaatactggctttgctttgcctgagggaggcagccat
gtccttagcccaactgagctggatgccagtgacacagacacagagcttgctcatctccga
tttatcctgacccaggctcctcgttatggccagctgcagctttctgggtacagtttgatc
ctgggaggtgcctttggcttggaggatatcagacaaggaagggtagtgtatgtgcatagt
ggagctgagaccaacagtgatacttgcagccttgatgtgagtgatggggttcatgttgtg
cccatcacattaaaagtgaatgtgcacccagttgatgatgaggttcctaccttacggttg
gccccaggcactgttggttcttacctggatgtattggagaacggtgctgttgaaatcact
gctaatgtaattcagggtacagatgaggatacagatgacttgatgttgactttcattgta
gaggatcctcctcagtatgggaacatcctggtccaaggggtgcctgcagagagattttcc
cagagagacgtgttggatggtgctgtggtgtatgctcacactagtggtgaaataggcctt
ctgcccaaagaagataccttcaaccttaccttgtctgacctggctgaggagtggaacatc
aggggcaatgttgttcaaggagtgtcagtattggtgactattctccctgtagacaataag
gccccagagatttttgtgggggagcagttcagagtaatggaaggtgacaaacgtgttatt
actcctgctcatctaagggctgaagatgtggatactcctagtgatgatatcctgtgcacc
attgttgcccaatctacatctgggtatgtagagaacatctctccagccccaggatctgaa
aaatccagagcaggtatagctattagtgcttttactttgaaagaccttcgtcaagggcat
attttttatgtccagagtatacataaaggtgtagaacctgttgaagacagatttgctttc
cgatgttctgatggcattaacttttcccaaaggcatgttttccctattgtcattaagcca
atgaatgatgaagagcctgaaatctttgtacgagagtttgttgtgatggaaggcatgagc
ctggttattgatacccctatcctcaatgcagttgatggggatgtccctgccgatgagtta
acatttacaatcaccaggcttcccaggcatggccacattgtgaaccagctggtcaatgga
actgtcctagcagagagcttcaccttggatcagataacagagagctccaacatactctat
gaacatgatgactctgagacaagagaggacaatttcgaggtgaaactctcagatggtaaa
cacaccacagtgaaaacaatatttattatggttattcctgtagatgatgagacacccaga
atggccatcaatgatggattggagattgaaataggggaaactaggactattcataacaga
atattgaaagctactgacctagattctgaagacaaaaccttgacatatattataagatat
ggaccaggacaaggttttttacagagattaaaaccttcaggtggagttgagaatatcagt
ctggggatgaacttcactcaagatgaagtggatagaaatctaattcgatatatgcacttt
ggccgagaaggtgttcgtgatcttatcaaatttgacgtgactgatggaataaatcctctc
attgaccgctacttttatgtcacagtaggtagcattgatatagtcttcccagatgtaatc
agcaaaggagtttctttgaaggaaggagggaaggtaacccttacaactgatctgcttagc
accagtgacttgaatagtccagatgagaacctagttttcactattaccagagcacccgtc
cgtggtcatcttgaatgcacagatcgacctggggtgcccatctccacttttactcagctc
ctattagcaggcaataaaatttattacattcatacttcagaagatgaggtgaaaatggac
agctttgagtttgaggtgactgacggttataaccccgtgtttcgtactttcagaatttct
atcagtgatgtggacaataagaaacctattgtcacaatccataacctggtggtgactgaa
aatgaatacaaactaataaccccgtttgaactgactgtagaagacagagatacacctgat
ccattgctaaaatttgtcgtcactcaaataccaattcacggtcaaatcatgttcaataac
tccaaaccagtcaccaccttcactaaacaagatctcaatgagaatctgatcagctacaaa
cacgatggcacagaatcagttgaggacagcttctctttcactgttacagatggcactcat
gctgatttctatgtcttccctaatactgtgtttgaaacaaggagacctcagactatgaag
attcggataatggctgtggacaacagcgtacctcaaattgtaaccaacaaaggtgctcag
actctgcgttttctggccacgggtcacatagggtttctgattaccaataaagtgctcaaa
gtggaagacagggacagtttacatattgctctgaagatcagaatcacagagggtcctcgc
catggattcctgattcatctggggaagggcaaccatagcatcagccagttcacccaagct
gatattgatgatatgaagatatgctatgttttacgagcgggtgacaatgccaccagtgac
atttttcacttcacagttgaagacagtggaggcaataagctgaagaatcaacattttcgt
ctaaactgggcatggatttccttagaacaggaatattatttagtaaatgaagattccaaa
tatcttgatgtcatccttaaacggagaggttaccttggagaaacttcttttataagtatt
agcaccaaagatggtactgccaagaaagataaagacttcagagggaaagcccagaagcag
gtgcagtttaatcctggccaaaccttagctacgtggcgagtacggattttgagtgatggg
gaacatgagcgatctgagtcctttcaaattgttctttctgagcctgtcatggcagttctg
gaatttccttctgtatccacagtggaaattattgatccaggagacgaatcaactgtcttt
attcctcagtctacctatactattgaagaagatgttggtgagttgtttattccagtcaga
agaagtggagatgtgagccaggaactgatggttatctgttacacacaacaaggaacagca
accggcactgctccgacctctgtgctttcttactctgactacatatccaggcctgaggat
cacaacagcgttctccgttttgacaaagatgaacgagaaaaaacatgtcgggttgtgatc
atagatgattccctgtatgaagaggctgagacctttgatgttctgctgagcatgccaatg
ggtggaagaattggtacagaatttgcaagcactcgaattaccattgtacctgacaaggat
gatgaaccagcattctactttggaaatgatgaatactatgttgatgagagtgctggctat
gttgaggtacgtgtttggaggacaggaactgatctgtctaaagctgcctctgttacagtg
aggtctcgcaaatctgaatcaagaactgcagaagctggagtagattatgttggtatcagt
cgtaatttggattttgcccctggagtcactatgcagacatttcgtgtggtaattctggat
gaccttggacaacccatgttagaaggaactgagaagtttgagcttgtgctaagaatgcct
atgaatgctgcccttggagaacccagcaaggctaccatcttcatcaatgactcagtctct
gatttgcctaagatgcagtttaaagaacctgtatatgtagtcaatgaaaatgatggacag
atttctgccatgatatacaggagtggagatatccaatacacatcaactgtgagatgttat
acaaggcaaggttcagctcaggtaatgatcgactttgaagaacgtcctaatactgatagt
tccatcatcacattccttcctggtgagacagagaagccttgcacactggtgcttatggat
gacacttttcatgaagaagatgaagaactacgtctggttcttggcactccaagaagtgat
tcatccttcggcgcctctattggtgaacaaaatgagaccctcataaagattcgagatgat
gcagacaaggctattattaaatttggtgagaccaaatttagtgtgagtgagccaaaggac
acaaggcaagtagcagttgtaaaaatcccagtgattcgtctgggagacacatccaaggtt
tctgttgtgagagttcatacaaaggatggatctgctatttctggagaggactatcaccct
atatcagaagaaattgaatttaaggagggtgaaacacagcactctgtggagattgaagtt
ctctttgatggagttagggagatgagagaagccttcactgttcacctgaaacctgatgag
aacatggttgctgaaatacagacagccaaggccattgtttacattgaagaaatgaacagc
atggcagatgtcacctttccttctgtccctcaagttgcatcccttttgatatatgatgac
acttctagagccaaagacagaaccagtcctgtggctggctatcctgtcatctgtattaca
gcttgcaatcctaaatatgaagactttgataagactggtacgatatgtgctagcgaacac
atcaataatactctgacacagtatcgatggcttgtgagtgcacccactggtcctgatggt
gttactagccccatgaaggaggttgacttcgataccttcttcacttcttccaagatgatc
acactggactccatttactttcaagctggctctcgtgtccaatgtgcagctcgtgctgtg
aattcagatgggaatgagggtcttgaacttatgagccctattgtaactataagcacatca
gaaggtctttgtcagcctcgtgtgtcaggagtagttggagcagaaccattctctgccaaa
ctgcgctacacaggcccggaagatcccgcttatgccaatctcatcaaactgacagtcaca
atgccacatattgatggcatgctgcctgttatttctacaagagagctctccaattttgag
ctgactcttagccctgatggaactagagttggaaaccataagtgctccaacctgttggat
tacacagaagtgaagacccaccacggtttcttgactgatgctaccaaaaatgcgaatgtg
attggagagaccattccctaccaatacagtccgggaatcagaggcttcaataccttacga
ttctaccgaaatctgaatctggaagcctgtttatgggagtttgttagctattatgacatg
tccgagctcctcacagattgtggaggcaccattgggacagatggacaggttctcaaccta
gtacaatcttatgtcacactgagggtccctctgtatgtctcctatgttttccactctccg
gtgggagtaggaggttggcagcactttgatctgcagtctgagctccggctgacttttgtg
tatgacactgccatcctgtggaaggacggcatcgggagtccaccagaggcagagctccaa
ggttctctgtacccaaccagcatgcgtattagtgaagaaggacgcctggttgtcaacttc
aagactgaagcacggtttcacggtctgtttgtcatgtcccaccttgcttcatctctaact
tccatggttatgtcagctgatcacccgagcctgacattcagcctcagcctcatccgaagc
gagcccacgtacaaccaaccagtacagcagtggagctttgtttcagattttgcggttcga
gactattctgggacctatacggtaaagctgatagcttgtaccactgctgcacaccaggag
tacagcctaccggtgatctgcaatcctagagagcccatcacatttgatctggatattcga
ttccagcaggttagtgacccagtggctgctgagttcagcttgaacacccagatgttcctt
ctctccaaaaagacgctctggctgtcagatggatcaatgggctttggacaagaaagtgat
gttgctttctcagaaggtgatgtcatttatggtcgagtgatggtggatccagtgcaaaat
ctgggtgattccttctattgtagcattgagaaggttttcctgtgtacaggagctgatgga
tatgtacccaagtataatccatccaacactgaatatgggtgtcttgctgattctccatcc
cttctgtacagattcaagattgtggataaagctcaaccagaaacacaagccacaagcttt
ggagatgtgctttttaatgcaaaacttgcaatagatgatccagaagcaacttctttagtt
aaacaaccaggctctgatggatttaaagtagactcaactcctctgtttcaggtgtctttg
ggcagggagtggtatgtccatacaatctacactgtacgatcgaaggagaaggctaaccgc
ggaattggcaaaagaagcgtggagcagcagtaccactcactttttagtggaggtagcaca
gtagcatccacacagagacgccgtaagagaggagttgtgggagccccagagcttgcaaaa
gacattggagtagaaaacaaccgagggacgaacatacagcacatagcactggatcgcacc
agcaagaaacaggtccctcaaagggaggttgtggtcagtggtgttctccccagagaactg
aacagccagagctcaggggtcagcgtagtcacaatcattggtggagctgctgccattttc
cttgccatctgcttaattgcaatcattattttgctgctaaagcggagacaaaattctgag
aaggaagcttcaaagaagtcaggcagcaatgaaccaatgatgctgcccgataactacacc
agcgatagctctgaggtttga
DBGET
integrated database retrieval system
