Tympanuchus pallidicinctus (lesser prairie-chicken): 128074790
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Entry
128074790 CDS
T08967
Symbol
ATM
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03440
Homologous recombination
tpai04068
FoxO signaling pathway
tpai04110
Cell cycle
tpai04115
p53 signaling pathway
tpai04210
Apoptosis
tpai04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128074790 (ATM)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
128074790 (ATM)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128074790 (ATM)
04210 Apoptosis
128074790 (ATM)
04115 p53 signaling pathway
128074790 (ATM)
04218 Cellular senescence
128074790 (ATM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tpai01001
]
128074790 (ATM)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpai03032
]
128074790 (ATM)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128074790 (ATM)
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128074790 (ATM)
Enzymes [BR:
tpai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128074790 (ATM)
Protein kinases [BR:
tpai01001
]
Serine/threonine kinases: Other
PIKK family [OT]
128074790 (ATM)
DNA replication proteins [BR:
tpai03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128074790 (ATM)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
128074790 (ATM)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
Check point factors
Other check point factors
128074790 (ATM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
M-HEAT_ATR
HEAT_ATR
HEAT
Motif
Other DBs
NCBI-GeneID:
128074790
NCBI-ProteinID:
XP_052526847
LinkDB
All DBs
Position
Unknown
AA seq
3066 aa
AA seq
DB search
MSLALHDLLMCCRRLENERATERRNEIENFKRLLRDPETVLQLDRNSDSRRGNQLNWDAV
FSVLKKYFQKEMENLRLTKPNASASTQTSKQKRMQEIGSLVKYFIRRANRRGPRLECQEL
LNYVVHIIKDPASCAAYGSDCSSILLKDILSVRKYWCEISQQQWPDLLILYGKFYLTPSG
KMNRVLVARIIHTLMRGYCFQTDELRSDVFSFFSTAMQYVRQERNTAGLDHIIAAMNVFF
NTFAVNCRKRICKIGEEILPTVLYIWTQYRPKDSLKESIIDLFLLQVHIHHPKGAKSQEK
GACNSAKWQSILHNLFDLLVNEINMIGSRGKYSSGSRSVAVKESLIELMADICHQVFTED
TKVLEITQLSTVTQSGGDALPSKRRRIELGWEVIRDNLQRSQKDFHVVPWLQITARLLSK
YPMSFPNCELPPLLSILHQLLPHQRRGERTPYVLKCLTEVALCQNQKTDLKSTHKIELQR
TWSKIWSLTIRSISFQQIETEIFGLLGAMIQGNLVVTDKELWKIFSGPACKPSSSAVCCL
ALVMSAYSVPENLDVGLEQNSCERNLDSVLRDAIMKWVLPCNLEEEIEECSELPPVLCSD
FPHLTLQKILVSLTMKNSRAAMTFFQNDAKCVQHLQGKEENSFWDVEELYLQTTFDEMDI
FTNFAVNVADKNVTGSRLVINQSLRETLECCLLAMSEKLLSNYAPKSKLVAVEHLVRCVS
LLVGVLGCYCYTGVFTEEDACKSELFQKAKSLIHYVGESISNSSKKLNEDAQLGSLRTLI
TQCTKCLCNCTKNSANKMVSNLFLRLLTSKFINDLLDICKNLMTFTGKPSELGEVDLVGN
DPEESMMEADNQISDDLFDDHSVTDISDTNESGEMQNVTGAVSPLAEEQLTKQDLLHLEI
LRFLCVCATTVQIQTVSFRASDIQRKLLMLIDDSIFDSAKPLHLHVYLLLLKELPVEENL
LPVDEVLKLLTPLSDVCSLYRRDQDVCKEILNNLLPIVVNLAQSSAHSEETRIAQGRFLT
VVGAFWKLAQGKRCTAPVRVALLNCMKALLEADPYSKWALLNVKNEDLPVSEVFPHFLAD
SHHQVSILAAKSITSLFQDVKQRDSSGLSKPLPLKLQQKAFENVYLRVQEGMGNPFSGDA
NPEDVLDKQCNRKAVLLMLITMVLCCSPVCEKQALFAICQSVKENGLEPHLVKKVLKKVS
DIFGYKNIEDFMTSHLDYLVVEWLKIKDSGYSLSAFPYVLLNYNGLEEFYRSCYKVLVPH
LVIRSQFEDVKSLGSKIGKDWRQVLADCFPKILVNILPHFAYESHGQKEVAEQRETASKV
YDVLKDENCLGKQQIDNLSHNNLSEIVVELLMTLHEPPNAKAEEGSHLSKYVRELDPVPN
PPHFPSYVIKATLDHISNCHKSKLKSLIAVLSKSPDSFQKILLALCKHASDTNNIYKKHR
VLIIYHFFVSLLLKEIKDGLGGAWAFVLRDVIYTLIHHISSRPPVFRDVSVRSFSLCCDL
LQRVCHTAVTCCNDALESHLHVIVGTLIPLAVDQPKIQPQVLGLLKYLVIDNKDNEYLYQ
AIKRLDPFPEYPAFEELRTTQLKIKYSKGPYSLLEEINRFLSVSVCDSLPSTRLEGLYDL
RKQLEQYKDQMKDLLKIFQEKPEDSVMVKLVVSLLQLSKMAVNHAGEKAVLEAVGSCLGE
IGPMDFSTIALQHAENALDSKAVDLLEDRKLQWVFIMLTQINTALTDNCIDVRSAAVSCL
KNILATNSGSEFWEVYKNKGDPMLIYLQPFRMSKKKVLAMPTNDSEASSEALDDTNLWIP
LGESHETWVKNLTRSVLDSGGVQNEVLQLMKPLCEVKTDLSQTLLPYLIHDILLHDSNES
WRNTLSVHVRKFFTACCRFASSSRSATPPNSDSEQETHVLRSLDKVSRRTMLAVVDYLRR
QKRSVSGTVFDDSFWLDLNYLEVAVAAQSCAAHFTALLYAEIYADKINIDKQQERSSFKA
AKSLTFEEESEKSTIAILNEKSKETGISLQDLLMDIYKSIGEPDSLYGCGGGRMLQPLAR
IRTYEHEAVWDKALLTYDLEAALSPSTRQAGIIEALQNFGLCHTLSMYLKGLEHENTEWC
AELQEIRYQAAWRNMQWDSISSVKNETGGSGYHESLYDALQSLRDKEFSTFYDTLKVARV
NEVEELCKGSLESVYTLYPSLCRLQLIGELENIGLLFSRPATTQQLNDIYLKWQRQSQLL
EDSDFHFQEPVMALRTVILEILLEKEHESAKRECIKDILTKHLMELSKLARTANNTQLPE
RAMFQIKQHNPTQYGVSEWQLEEAQVFWAKKEESLALNILKELIKKLDANWFQVENDPHL
KLMYTECLRLCGTWLAETCLENPTVIMQKYLEKAVEIAASHHGDSSDELKKGKTKAFLSL
ARFSDNQYQRIENYMKSSEFENKQALLKKAKEEVGLLRERRVQTNRYTVKVQRELELDEC
AIHALTEDRQRFLCKAVENYISCLLSGEEHDMWIFRLCSLWLENSGVDRVNEMMKKNAEK
IPSYKFLPLMYQLAARMGTKMMGGLGFHEVLNNLMSRISLDHPHHTLFIILALANANKDE
LLTKTDAKRINKLIKNAPKEISQLDVDRMEAARNIINIIRKRRAHMVRDVEALCDAYITL
ANVDATPWKAQRGGISIPADQPIIKLKNLEDVVVPTMEIKVDPTGRYENLVTVRSFKPEF
HLAGGLNLPKIINCIGSDGKERRQLVKGRDDLRQDAVMQQVFQMCNALLQQNTETRKRKL
TIRRYKVVPLSQRSGVLEWCTGTTPIGEFLVNADNGAHKRYRPHDYSGFQCQKIMMDAQK
KHSEEKYNIFMKVCDNFQPVFRYFCMEKFRDPAVWFEKRLAYTRSVATSSIVGYILGLGD
RHVQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRC
CEKTMAVMRNSQEALLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDEADMSSTLGADPRA
CKRKASSDDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLSRLFP
GWKPWV
NT seq
9201 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgcattgcatgatctgcttatgtgttgtcgtcgccttgaaaatgagagagct
acagaacgaaggaatgaaattgaaaatttcaagcgactcctccgtgatcctgaaacagtt
ctccagctggatcggaattccgattctaggagaggaaaccaactcaactgggatgctgtg
ttcagtgttctgaagaaatatttccagaaggaaatggaaaacctcagattgacaaaacca
aatgcatctgcttcaacccagacttccaaacaaaaaaggatgcaggagattggcagttta
gtcaaatatttcatcaggcgtgctaatcgaagaggacccagactggaatgtcaggaactt
ctgaactatgtcgtgcatattataaaagatccagcaagttgtgctgcttatggatctgac
tgtagtagtatactcctaaaggatatcctgtcagtaaggaagtactggtgtgagatatcc
cagcagcaatggccagatctgctgatactgtatggaaaattttacctcacaccttctggg
aagatgaatagagtcttggtggccagaataattcacacactgatgaggggatattgcttc
caaactgatgagttgagatctgatgtgttcagctttttttcaacagcaatgcagtatgtg
aggcaggagagaaatactgcaggcctggatcacattattgcagcaatgaatgtcttcttt
aatacatttgctgtaaactgtcgcaaacggatttgtaaaattggggaagaaattttgcct
acagtgctttatatatggactcaatataggccaaaagattcgttgaaggaatcaataatt
gatttatttcttctccaagttcatattcatcatccaaagggtgcaaagtctcaggaaaaa
ggtgcatgtaactcagcaaagtggcaaagtattctacataacctgtttgatctgctggtg
aatgaaataaatatgataggtagtagaggaaagtattcttcaggctcacgttctgttgct
gtaaaggaaagtttgattgagttaatggctgatatttgtcatcaggtgtttacagaggat
accaaagttctggaaattacccagttgtccaccgttacacagtcaggtggtgatgcacta
cccagcaagcgcaggaggattgagctcggctgggaggtaattcgggacaacctgcaaaga
tcacagaaggattttcatgtcgtaccttggttacagattacagctcgattactatcaaaa
tatcccatgagttttcctaactgtgagctacctccgctgctcagtatcctgcaccagtta
ctgcctcatcagcgacgaggagaaaggactccctatgtgctgaagtgtcttacagaggta
gctttgtgccaaaatcagaaaactgatttgaagagcacccacaagatagagctccagagg
acatggtcaaagatttggtctcttactattcgtagtataagttttcagcaaattgaaaca
gagatctttggattacttggagctatgattcaagggaatcttgttgtgacagataaagaa
ctctggaagatattttcaggaccggcatgcaagccttcaagttctgcagtatgttgctta
gcattagtgatgtctgcttattcagtgccagaaaatttggatgtaggattggaacagaat
agctgtgaaagaaatttggattctgtcttaagggatgcaataatgaaatgggtacttcct
tgcaatttggaggaagaaatagaagaatgttcggaattgcctcctgtgctctgcagtgat
ttccctcatcttacattacaaaaaattcttgtgagccttacaatgaagaacagtagagct
gccatgacgtttttccaaaatgatgctaaatgtgtgcagcacttacaggggaaagaagaa
aacagtttttgggatgttgaagagctgtatctgcagacaacatttgatgaaatggatatt
ttcactaactttgcagtaaatgttgcagataaaaatgtgactggttcaagacttgtcatc
aaccaaagtcttagggaaacactggagtgctgtctcttagcaatgtcagaaaagctttta
agtaactatgctcctaagtctaagcttgttgctgtggaacaccttgtccgatgcgtcagt
ctcttggttggtgttcttggctgctattgctacactggtgtatttactgaagaggatgca
tgtaaatcagagttgtttcagaaagctaagtccctcattcattacgttggagaaagcatt
tctaactcaagcaaaaaactaaatgaagatgctcagctcggctcactgagaaccttgata
acgcagtgtacaaagtgtttatgcaattgtaccaagaacagtgctaataagatggtgtct
aatttattcctgcgtttgttaacatcaaaatttattaatgatcttctggatatctgcaaa
aatctgatgacttttactggaaaaccaagtgaattaggagaagtggacctagtggggaat
gaccctgaggagagtatgatggaagcagataatcagatatctgatgatctgtttgatgat
cattcagtgactgacatcagtgatacaaatgagtctggtgagatgcaaaatgtaacaggt
gctgtgagcccattagctgaagaacagttgacaaagcaggatttacttcaccttgaaatt
ctgagattcttatgtgtttgtgcaactactgtccaaattcagacagtgagcttccgagcc
tctgatatacaaaggaagctgttaatgctcattgatgacagcatctttgatagcgcaaag
ccgctgcatctgcacgtgtacttgttgctcttgaaggagctccctgttgaagaaaacctt
ctgcctgtagatgaagttcttaagcttcttacacctctttctgatgtatgttctttgtac
cgccgagaccaagatgtgtgcaaagaaattctaaataatttgctacctatagtagtaaat
ttggcccagtccagtgcacatagtgaggagacaaggattgcacaagggcgatttttgaca
gttgttggagccttttggaaattagctcaaggaaagagatgcacggcaccagtaagagtg
gcacttttaaactgcatgaaagccctgcttgaggctgatccttattcaaagtgggctctc
cttaatgtaaaaaatgaagatcttcctgtgagtgaggttttcccacattttcttgcagat
agtcaccatcaagtttctattcttgctgcaaagtcaattaccagtttgtttcaagatgtg
aaacagagagattcttctggattgtcaaaacctcttcccttgaagctccagcaaaaggct
tttgagaatgtgtatctcagagttcaggaaggaatgggaaatccgttcagtggtgatgca
aatcctgaagacgttttggacaaacagtgtaataggaaagcagttttgctgatgctcata
accatggttctgtgctgcagtcctgtatgtgaaaagcaagctttgtttgctatttgccag
tctgtgaaagagaatggattagaacctcaccttgtgaaaaaggttttgaagaaagtgtct
gacatttttggctataagaatatagaagacttcatgacatcacatttggactatttggtg
gtggagtggctgaaaataaaggacagtggatatagcctgtctgcctttccttatgttctt
ctgaactataatggtcttgaggaattttacaggtcttgttataaagttttggttccacac
ctggtgattagaagtcagtttgaagatgtgaaatcacttggtagcaagattggaaaagac
tggaggcaagttctggcagactgttttcccaagatacttgtgaacatcctcccacatttt
gcctatgaaagccacggtcagaaggaagtagcagagcaaagagagacagcttctaaagtc
tacgatgtgctcaaggatgaaaactgcttagggaaacagcaaatcgacaatttatctcat
aataatttatcagagattgtggttgaacttctgatgactttacatgaaccacctaatgct
aaggcagaagagggatctcatctaagtaaatatgttagggaattggatcctgttcctaat
cctcctcattttccttcttatgtgattaaggcaaccttggaccacattagcaactgtcat
aaaagcaaactaaaaagtctcattgcagttctttctaaaagccctgattctttccagaaa
attctgctagccctttgtaagcatgcatcggatacaaacaatatatacaagaagcacaga
gttcttataatttatcacttctttgttagtctgttactcaaagaaataaaagatggttta
ggaggagcgtgggcttttgtcctccgagatgtgatttatactctgattcaccacatcagc
agcagaccccctgtctttagagatgtatccgtgcgcagcttttcactctgttgtgatctt
cttcagcgtgtttgccacacagcagttacgtgttgcaatgatgctctggagagccacctt
catgttattgtaggaacactgatacctcttgctgtggaccagcctaagattcagccacag
gtcttaggcttgttgaagtacctggtgatagacaataaagataatgaatatctctaccaa
gcaatcaaacgcttagatccttttcctgaataccctgcttttgaagagttgcgaacaact
caactgaagataaaatacagtaaaggaccatattctcttttggaggaaattaatcgcttt
ctctcagttagtgtttgtgattcactgccctcaacacgacttgaaggactgtatgattta
cgtaaacagttggaacaatataaggatcagatgaaggacctcctgaagatttttcaggaa
aaaccagaagattctgtaatggtgaagctcgtggtgagcttactgcagctgtcaaagatg
gcagttaatcatgcaggtgaaaaagcagtgctggaggctgttggaagttgcttgggagaa
ataggtcccatggatttttccaccatagctcttcagcatgctgaaaatgcactggattct
aaagcagtggacttgcttgaagatagaaagcttcagtgggtcttcataatgttaacacaa
ataaatactgctttaacagataattgtattgatgttagatctgctgccgtttcctgtttg
aaaaacatactagccaccaattctggcagtgaattttgggaagtttataaaaataaaggt
gatcccatgttaatctatctacaacctttcagaatgtccaagaagaaggttttggcaatg
ccaacaaacgattcagaggcttcttcagaagctttggatgatacaaacctgtggattcct
ctgggagaaagtcacgaaacctgggtcaagaacttaacccgttcagtactggacagtgga
ggcgtacaaaatgaagttctccagttaatgaagccactgtgtgaggtgaaaacggacttg
agtcaaactttgcttccatacctgattcatgatatccttcttcatgattcaaacgaatct
tggcgaaatactctgtcggttcacgtgcggaagttttttactgcctgttgcagatttgcc
tcgtctagtagatctgctacaccaccaaattctgactcagagcaagaaacccatgttctt
agaagtttggataaagtatctcgacgaaccatgcttgctgttgttgattacttaaggagg
caaaaaagatctgtttcaggtacagtttttgatgacagcttctggctagatctgaattat
cttgaggttgctgtagcagcacagtcttgtgctgctcacttcacagcactgctctatgca
gaaatctacgcagacaagataaacatagacaaacagcaagaaaggtcttcttttaaagca
gctaaaagtttgacatttgaagaagaaagtgaaaaatcaactattgctattttgaatgaa
aaaagtaaagaaactggcataagtttacaggaccttctcatggacatatacaaaagtatt
ggagagcctgacagtctctatggttgtggtggaggaagaatgttacagccattagcacgg
ataagaacatatgagcatgaagcagtatgggataaagcccttctaacatatgacctcgag
gcagccctctctccatctactcgccaagcagggataatagaggctttgcagaattttggg
ctttgccacactctttccatgtatttaaaaggactggaacatgaaaacactgagtggtgt
gcagaactccaggaaatacgctaccaggcagcgtggaggaatatgcagtgggacagcatc
tcatctgtcaagaatgagacaggtggatcagggtaccatgaatcattgtatgatgctctt
cagtccttacgagataaagaattttctaccttttatgacactcttaaggttgccagggtg
aatgaagtggaagagctgtgcaaaggcagtctcgagtctgtgtatacattatatccaagt
ctttgcagattacagctcattggagagctggaaaatataggtctgctattttccagacct
gctacaactcaacaactgaatgatatttatttgaaatggcagagacagtcccagcttctt
gaggacagtgacttccatttccaggaacctgtcatggctctgcgcactgtaattttggag
atcttgcttgaaaaggagcatgaaagtgccaaaagagaatgtattaaagacattctcacc
aaacatctcatggagctctctaaattggcaagaactgctaataatacccagcttccagaa
agagctatgtttcagatcaaacaacacaaccccacacaatatggagtttctgaatggcag
ctagaagaagctcaggttttctgggctaaaaaggaagagagccttgcactgaatattctg
aaagagttgataaaaaaattagatgcaaactggtttcaggtggagaatgatcctcacctg
aaattgatgtatacggagtgtctgaggctatgtggaacctggttagcagaaacatgtttg
gaaaaccctacagtcatcatgcagaaatacttagagaaggctgtggaaattgctgcaagc
caccacggagacagcagcgatgaactgaagaaaggaaagacaaaggctttcctgtctttg
gctcgtttctctgataatcagtaccagcgaattgagaattacatgaaatcctcagagttt
gaaaataagcaggcattactgaagaaggccaaggaggaggttggcctcctgagggagcgg
agagttcagaccaatagatatacagtgaaggttcagagagagcttgagctggatgaatgt
gccatccatgccctaactgaggatcgtcagcgtttcttgtgtaaagcagtggagaactac
atcagctgtttgctcagtggggaggaacatgacatgtggatcttccgactgtgttcccta
tggcttgaaaattctggagttgacagagtcaatgagatgatgaagaaaaatgcagagaaa
atcccttcttacaagtttttgcctctgatgtaccagctggctgctcgaatgggaaccaag
atgatgggtggtctaggatttcatgaagttctgaataatctgatgtccaggatttcactg
gatcacccacatcacactttgtttataatactggccttggcaaatgctaacaaagatgaa
ctcctgacaaaaacagatgcaaaaagaataaataagttaattaaaaatgcaccaaaagaa
atttcacagcttgatgtggaccgaatggaggcagctagaaatataatcaacatcataaga
aagaggagagctcacatggttagagatgtagaagcgctttgtgatgcttacatcacgtta
gcaaatgtagatgctactccatggaaagcccaaagaggaggaataagtattccagctgac
cagccaattattaaactgaagaacctggaggatgttgttgttcctaccatggaaattaag
gtggatcccacaggaagatatgaaaatttggtgacagtaaggtcttttaagccagaattt
cacttagcaggaggtctgaatctgccaaaaataatcaattgtataggatcagatggtaaa
gaaagaaggcagctggtgaagggccgtgatgatctgaggcaagatgctgttatgcagcag
gttttccagatgtgtaacgcgttgctccagcaaaacactgaaacgcggaagagaaaatta
accatccgaagatacaaggtagttcccctttctcagaggagcggtgtgctcgagtggtgc
acaggaaccacccccattggggagttccttgtgaacgctgacaacggagcccacaagaga
tacaggcctcacgattactccggtttccagtgccagaagataatgatggatgcacaaaag
aaacattctgaagagaaatacaacatcttcatgaaggtctgtgacaattttcaacctgtg
tttcgttatttctgcatggaaaaattccgggacccagctgtgtggtttgagaagcgattg
gcgtacactcgcagcgtggctacatcttctatagttggctacatccttggacttggagac
agacatgttcagaatatcctgatagatgaacaaactgcagaactggtgcatatagatttg
ggagttgcttttgagcaaggtaaaatccttcccactccagagactgttccatttagatta
accagggacattgtggatggaatgggcattactggagtagaaggagtcttcagaagatgc
tgtgagaaaacaatggctgtcatgagaaattctcaggaagctttgctgactattgtggag
gtgctgctctatgatccccttttcgactggaccatgaaccctttgaaagctttatatctg
cagcagagaccagaggacgaggctgacatgagctctactctcggtgctgatccacgagca
tgtaaaaggaaagccagcagtgatgaccagagctttaacaaggtggctgagcgcgttctg
atgagacttcaggagaagctgaagggcgttgaagagggaacggtgctcagcgtgggaggg
caggtgaacctgctgatacagcaggccatggaccctaaaaacctgagccgcctctttcct
ggctggaaaccctgggtgtga
DBGET
integrated database retrieval system
