Tympanuchus pallidicinctus (lesser prairie-chicken): 128074797
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Entry
128074797 CDS
T08967
Symbol
CNTN5
Name
(RefSeq) contactin-5 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128074797 (CNTN5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tpai00537
]
128074797 (CNTN5)
Cell adhesion molecules [BR:
tpai04515
]
Immunoglobulin superfamily
Contactins
128074797 (CNTN5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tpai00537
]
Others
128074797 (CNTN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_5
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_4
Pur_ac_phosph_N
C2-set
Motif
Other DBs
NCBI-GeneID:
128074797
NCBI-ProteinID:
XP_052526866
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MMWLSWKLFLFLSLTGCLSEYSEAVPGVPTSYAAILRIKSGSSSLASSNSKNRPRLSNPS
LGSVPSPGWRGAAQPYHSPTNLYHFSEAFKHDESVDYGPVFTQEPDDVIFPTDSEEKKVS
MNCQAHGNPTPTYRWLRNGTEIDVESDYRYSLIEGSLIISSPNEMKDSGQYQCLTTNMFG
SILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEIIYSWVFNEFPSFVA
EDSRRFISQETGNLYISKVQKSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEP
KIEVHFPYTVTAARGTTVKMECFALGNPVPTISWKKVNGHNPSKARLRKSQAVLEIPNVQ
LEDAGMYECKAENSRGRNVFRGQLQVYTYPQWVEKLNDTELDSGEQLRWECKATGKPRPT
YRWLKNGAPLWPQSRIEMVNSVLMIRTVNISDAGMYQCLAENKYGTIYASAELKILASAP
TFPLNQMRKTIIITKGQEVVIECKPQASPKPTITWKKGDKALRESKRITILPQGSLRILN
ASKSDEGRYSCQGVNVFGSAEIVASVSVKEPTRIELTPKKIELTVGESIVLSCKALHDST
LDVTFYWTLNGQPIDFDKEDGHFESIKAQASSADLMIRNILLMHAGRYGCRVQTAADTVS
DETELLVRGPPGPPGVVIVEEITDTTATLSWSPGADNHSPISLYNLQARSPFSLGWQTVK
TVPDVISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANV
SGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSDASKFIYRDES
VPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSVSEILVAWKHIK
ESLGRPQGFEIGYWKDMEQEEAAEKVKTAGNESSLLLTGLEGNTLYHLTVRAYNAAGYGP
PSAAVRVATKKSPPSQAPSNVMWIQDGSHVSLGWEPVRPLANESEVMGYKVLLRQEGQSN
SQVIETQKTSAVVILPDVGVYIIEVCAVSEGGDGTASPQIRVPSYAGGKVTSAQSTLHMF
STSSSSVTLLLVLMVPSSSW
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggttgtcatggaaactatttctgtttctgtcactcaccgggtgtctttcagaa
tattcagaagctgttcctggtgtccctacatcatatgctgctattctaagaatcaaatct
ggtagttcatctttagcttcatctaactcaaagaacagaccacgattaagcaatccttca
ttaggaagtgtaccttcgccaggctggagaggagctgcacaaccttatcattccccaaca
aacctctatcacttttcagaggccttcaaacatgatgaaagtgtcgattatggaccagtg
tttacacaagagccagatgatgtgatttttcccactgattctgaagagaagaaagtgtct
atgaattgtcaagctcatggaaatcctacccccacatatagatggcttcgaaatggaact
gaaattgatgttgaaagtgattatcgctacagcctaatagaaggaagtttgatcatcagt
agccctaatgagatgaaggattctggacagtatcagtgtttaactaccaacatgtttggt
agcatattaagcagggaagctgttcttcagttcgcatatctggggaattttagtggtcgg
acaagaagtgctgtctctgtacgtgaaggtcaaggagtggttctgatgtgctcccctcca
cttcattcaccagagatcatctatagctgggtgtttaatgagttcccatcttttgtggca
gaagatagcagacgcttcatctcccaggagacaggcaatctctacatctccaaggtgcaa
aaatctgatgttggcagctatatatgtctggtaaaaaacacagtgacaaatgccagagtt
ttgagtcctcctacacctctgacactgagaaatgacggtgtgatgggggagtatgaacca
aaaattgaagttcattttccttacacagtcacagcagcaaggggaactactgttaagatg
gaatgttttgcacttggcaaccctgttccaacaatctcttggaagaaagttaatggtcat
aatccaagtaaagctcgtctgagaaaatcccaagctgtgcttgaaatacctaatgttcag
ctagaggatgcagggatgtatgaatgtaaagctgaaaactcacgtggaaggaatgtcttc
agaggacagctacaagtgtacacctacccacagtgggtggagaaacttaatgatactgaa
ttagatagtggggaacagctacgatgggaatgcaaagccactggaaagccaaggcccacg
tatcgttggctgaaaaatggagctcctctctggccacagagcagaattgagatggttaac
agtgtactgatgatccgcactgtgaacatctcagatgctggaatgtatcagtgcttagca
gaaaataagtatggcaccatttatgccagcgccgagctgaagattttagcttcagctccc
actttcccactaaatcaaatgaggaaaacaataattattaccaagggccaagaagttgtc
attgagtgcaagccacaagcctctccaaagccaactatcacttggaagaaaggagacaaa
gctttaagggagagtaagaggataactattcttccacaaggaagcttgcgaattctgaat
gcttccaagtctgatgaaggacggtattcatgccaaggtgtaaatgtatttgggtctgca
gaaattgttgcatcagtatctgttaaagaacctacgagaatagagctgactcccaagaaa
atagagttaacagttggagaaagcatcgtcctcagttgcaaagcccttcatgatagcacc
ctagatgtcactttctactggacacttaatgggcagccaattgattttgataaagaagat
ggacactttgaaagcatcaaggcacaagcgtcctcggcagacctgatgatcaggaacatc
ctgctgatgcatgctgggcgatacggctgcagggtccagactgcagcagacactgtgtca
gatgagaccgagctgcttgttaggggtcctcctggtcccccaggggttgtaatagtggag
gaaattacagacaccacagcaacactctcctggagtcctggggcagacaatcacagcccg
atctccctctacaacctgcaagctcgcagtccattttctctcggctggcagacagtaaaa
acagttcctgatgtgataagtggagacatggagtctgctatggctgttgaactgaaccct
tgggtggagtatgagtttagagttgtagcaaccaacaaaattgggactggagacccaagt
gcaccatcccgcatgatcagaaccaatgaagcagttccaaagacacctccagctaatgta
agtggcagaagtggaaggcgtcatgaattagtaatagcatgggagccagtatcagaagag
tttcagaacggagaaggatttggatatattgtagcattcagacctaatggaacacgtggt
tggaaggaaaaaatggtgacatcttcagatgcctcaaagtttatctatagagatgaaagt
gttccacctctcactccttttgaggtgaaagttggtgtttacaataacaaaggtgatggt
cccttcagcccaattgtggtcatctgctcagctgaaggagaacccactgctgctcctatc
gatgtcaaagctacgagtttgtctgtatcagagattcttgttgcgtggaaacatattaaa
gaaagtctaggaagaccacagggatttgagattggttactggaaagacatggaacaggaa
gaagcagcagaaaaggtgaaaactgcaggaaatgagtcatctctccttctgacaggatta
gaaggaaatacattatatcacctaactgtgcgggcatacaatgctgcagggtatggacca
cccagcgccgctgtgcgtgtagcaaccaagaagtcccctcccagccaagcaccaagtaat
gttatgtggatacaggatggttctcacgtgtcccttggatgggagccagtcagacctcta
gctaatgaatctgaggtaatgggatacaaggtgttacttaggcaagaaggccaaagcaac
agtcaagttatagaaacacagaaaacttccgcagtggtaattcttcctgatgttggtgtc
tacattattgaggtctgtgcagtcagtgaaggaggcgatgggactgctagtccccagatt
agagttccatcttatgcaggaggtaaagtaacaagtgctcagtccaccttacatatgttc
tctacttcctcgtcctctgtaacattgcttttggtactcatggttccttcaagttcatgg
tga
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