Tympanuchus pallidicinctus (lesser prairie-chicken): 128074828
Help
Entry
128074828 CDS
T08967
Symbol
NBEA
Name
(RefSeq) neurobeachin isoform X1
KO
K24183
neurobeachin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128074828 (NBEA)
Membrane trafficking [BR:
tpai04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
128074828 (NBEA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Laminin_G_3
Neurobeachin
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
DUF4800
PIGA
Motif
Other DBs
NCBI-GeneID:
128074828
NCBI-ProteinID:
XP_052526949
LinkDB
All DBs
Position
Unknown
AA seq
2965 aa
AA seq
DB search
MASEKSAAGPEPQPAGLISVGAGGGGGGGGGVVAMGEPRASGAGSVVLPAGMINPSVPIR
NIRMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEFDLEMNFIIQDAESITCMSELLEHC
DVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQVLLKMSTVDDMIADLLVDMLGVLASY
SITVKELKLLFSMLRGENGIWPRHAVKLLSVLNQMPQRHGPDTFFNFPGCSAAAIALPPI
AKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLYCFRTSKGVGYSAHFVGNCLIVTSLKSK
GKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQLVSYGDMAWHVNTNDSYDK
CFLGSSETADANRVFCGQLGAVYVFTEALNPAQIFAIHQLGPGYKSTFKFKSESDIHLAE
HHKQVLYDGKLASSIAFTYNAKATDAQLCLESSPKENPSIFVHSPHALMLQDVKAIVTHS
IHSAIHSIGGIQVLFPLFAQLDNRQLHDSQVETTVCATLLAFLVELLKSSVAMQEQMLGG
KGFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLDGLSHGAPLLKQLCDHILFNPAIWIHT
PAKVQLSLYTYLSAEFIGTATIYNTIRRVGTVLQLMHTLKYYYWVVNPADSSGITPKGLD
GPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDENIHDVLQLLVA
LMSEHPASMIPAFDQRNGIRVIYKLLASKSESIWVQALKVLGYFLKHLGHKRKVEIMHTH
SLFTLLGERLMLHTNTVTVTTYNTLYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVV
ATLLKNSTPSAELMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNSE
EQKITEMVYNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQ
EEENIKKGKKGNVSTISGLSSQTTGAKGGMEIREIEDLSQSQSPESETDYPVSTDTRDLL
MATKVSDDVLGSTERPGGGVHVEVHDLLVDIKAEKVEATEVKLDDMDLSPETLVTGENGA
LVEVESLLDNVYSAAVEKLQNNVHGSVGIIKKNEEKDNGPLITLADEKDEPSTNSTSFLF
DKIPSQEEKLLPELSSNHISIPNVQDTQMHLGVNDDLGLLAHMTGSVDITCTSSIIEDKE
FKIHTTSDGMSSISERELASSSKGLEYAEMTATTLETESSGSKTVPNVDAGSIISDTERS
DDGKEAGKEIRKIQTTTTTQAVQGRSVTQQDRDLRVDLGFRGMPMTEEQRRQFSPGPRTT
MFRIPEFKWSPMHQRLLTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLIS
QMVDNIIIACGGILPLLSAATSPTGSKVSIATTELENIEVTQGMSAETAVTFLSRLMAMV
DVLVFASSLNFSEIEAEKNMSSGGLMRQCLRLVCCVAVRNCLECRQRQRERVNKTSLISS
KAQDALQSVTASAATKTPLENVPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQAQF
LALAVVYFISVLMVSKYRDILEPQRETARSGSQAGRNIRQEINSPTSTVVVIPSIPHPSL
NHGFLAKLIPEQSFAHSFYKETPTAFPENIKDKETPTPVEDIQLESSIPHTDSGIGEEQM
PNILNGTDLETSTGPDAMSELLSTLSSEVKKSQESLTESPSEILKTSSSISSISQSKGIN
VKEILKSLVAAPVEIAECGPDPIPYPDPALKREAQAILPMQFHSFDRSVVVPVKKPPPGS
LAVTTVGAATAGSGLPPGSTPNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFVNGATS
KNLPAVQTVAPMPEDSAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQEL
LIEGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVA
NEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQK
ILNILTNKHGAWGAVSYSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHSDALLKAAVEYG
TEEDVVKSKKTFRSQAVVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLVA
PVVVAKGTLSITTTEIYFEVDEDDPAFKKIDPKVLAYTEGLHGKWMFSEIRAVFSRRYLL
QNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKS
SNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRD
LSKPIGALNPKRAVFYAERYETWEDDQTPPYHYNTHYSTSTSTLAWLVRIEPFTTFFLNA
NDGKFDHPDRTFSSVARSWRNSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGIREDEVVV
NDVELPPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLT
YEGSVNLDSITDPVLREIPEAYFIRDPHTFLLTREFIKAMEAQIQNFGQTPSQLLIEPHP
PRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCS
RLFAVNRWHNTVGLRGAPGYSLDQAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAH
CFVVTADNRYILICGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVS
GSRDATLLLWYWSGRHHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKE
GPCLVHTITGDLLRALEGTENCLYPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEI
NDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLIT
GMASGSIVAFNIDFNRWHYEHQNRY
NT seq
8898 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgagaagtcggcggcggggccggagccgcagcccgcgggactcatctccgtc
ggggccggcggcggaggcggcggcggaggcggcgtcgtggcgatgggggagccgagggcg
tcgggcgctggctccgtggtgctccccgcggggatgattaacccgtcggtgccgatccgc
aacatccggatgaaattcgccgtcctcatcggactcatccaggtcggcgaggtcagcaac
cgggacatcgtggagacggtgctgaacctgctggttggtggtgaatttgatctggagatg
aactttataatccaggatgcagagagcattacgtgcatgtcagagcttttggagcactgt
gatgtaacgtgccaagctgaaatttggagtatgttcacagcaattctacgtaaaagtgtc
cgtaatttacagactagcacagaagttggcttaattgaacaggtactgctgaagatgagt
actgtggacgacatgatagcagatcttctagttgatatgttgggggttcttgccagctac
agcatcactgtcaaagagttgaagcttttgttcagcatgcttcgaggcgaaaatggaatc
tggccaagacacgcggttaaattgttatcagtccttaatcagatgccacagagacatggg
cctgatacctttttcaacttccctggctgtagtgctgcagcaattgcattgcctcctatt
gctaagtggccttatcaaaatgggtttacccttaacacttggtttcgtatggacccacta
aacaatataaatgtggataaggataaaccctatctctactgtttccgcactagcaaaggc
gttgggtattctgctcattttgttggcaattgcttaatagttacatcactgaagtcaaaa
ggcaaaggtttccagcactgtgtgaagtatgactttcaaccacgcaagtggtatatgata
agcatcgtgcacatctataatcgctggagaaacagcgaaataaggtgttatgtgaatggt
cagctggtatcctatggtgacatggcgtggcacgttaatacgaatgatagttatgacaaa
tgttttcttggctcttcggagactgctgatgctaacagagtgttctgtggccaacttgga
gctgtatatgtattcacagaagccctcaacccagcacagatttttgcaatacatcagtta
ggacctggttataagagcacattcaaatttaaatctgagagcgacattcatctggctgag
caccataaacaagtgctatatgatgggaaacttgcaagtagcattgcttttacttacaat
gccaaggctactgatgctcagctatgccttgaatcctcaccgaaagaaaatccttcgatt
tttgtacactccccacatgctcttatgcttcaggatgtgaaagctatcgtaacccactcc
attcacagcgcaattcattccattggagggattcaagttctctttcctctctttgcccaa
ctagacaatcgacagctgcatgacagtcaggtggaaacaacagtttgtgctaccctattg
gctttcttggttgagcttcttaagagttcagtagcaatgcaagaacagatgctcggtgga
aaaggctttctagtcattggctacctccttgaaaagtcatctagagttcatataaccaga
gcagttctggaacaatttttatcatttgcaaaatatttggatggattgtctcatggagca
cctctgctgaagcaattatgtgatcacatcctttttaatcccgctatctggatacatacc
cctgcaaaggtgcaattgtccttgtatacctacttgtcagctgaattcattggaactgct
acaatctataacactatacgcagagtaggaactgtactgcagttaatgcacacactgaaa
tactactactgggtggttaatcctgctgatagcagtggcattactcctaaagggttagat
ggtcctcgaccctcacagaaagaaatcatatcactaagagcattcatgcttctgtttctg
aaacaacttatattgaaggatcgaggtgtgaaagaagatgaactgcagagcatattaaat
tacttgctcacaatgcacgaggatgaaaatattcatgatgtgctgcagctgctggtggca
ctgatgtctgaacatccagcatccatgatacctgcctttgatcagagaaatgggatacga
gtaatttataaacttttggcttccaaaagtgagagtatatgggtgcaagctttgaaagtc
cttggatattttctcaaacacttgggtcataaacgaaaggttgaaatcatgcatactcac
agtcttttcactcttcttggagaaaggttgatgctgcatacaaatacagtgaccgttaca
acatataatacgctttatgagattttgacggaacaagtatgcactcaagttgttcataaa
ccccatccagaaccagattctacagtgaaaatacagaatccaatgattcttaaggtggtg
gcaacactgttaaaaaactccacaccaagtgcagagctgatggaagttcgacgtttattc
ttgtctgatatgataaaactctttagtaatagccgtgaaaacagaagatgtttacttcag
tgttcagtgtggcaggactggatgttttctctgggatacattaaccctaagaattctgaa
gagcagaagatcactgagatggtttacaacatattccgtattctcttgtatcatgcaata
aaatatgaatggggaggctggagagtgtgggtggatactctttctatagctcattccaag
gtcacatatgaggctcacaaggagtacctcgcaaaaatgtatgaagagtatcaaaggcaa
gaggaagaaaacataaaaaaggggaagaagggtaatgtaagcactatctcaggtctttca
tctcagacaacgggagcaaaaggtggaatggaaatccgagagatagaagacctttcacaa
agccaaagtccagaaagtgaaacagattaccctgtcagtactgatacaagggacttgctt
atggctacaaaggtgtctgatgatgtacttggaagtactgagagaccaggaggaggagtg
catgtagaagttcatgaccttttagttgatataaaagctgaaaaggtagaagctactgaa
gtaaaacttgatgatatggatttatcaccagagacactagtaactggagaaaatggtgca
cttgtagaagttgaatcacttctagataatgtatatagtgctgctgttgagaagctccaa
aacaatgttcatggaagtgtaggtattattaagaagaatgaggaaaaagataatggtcca
ttaataactctggctgatgagaaagatgaaccttctactaacagtacctcatttctcttt
gacaaaatacctagtcaggaggagaaacttctacctgaactttcaagtaatcatatttcc
attcctaatgtgcaagacacacagatgcatcttggtgtaaatgatgatttgggattactt
gcacatatgacgggtagtgtagatataacatgtacttcaagtataatagaggacaaggag
ttcaagattcacacaacttcagatggaatgagtagtatttctgagagggagttggcttca
tcatctaaaggattagaatatgctgaaatgactgccacaactcttgagacagaatcttct
ggtagcaaaactgtacctaatgttgatgcaggaagtataatatcagacacagaaagatct
gatgatggtaaagaagcaggaaaggagatacggaagatccagaccactaccacaacccag
gcggtacagggtcgatctgtcacccagcaagaccgagatttacgtgttgacttgggattt
cgagggatgccaatgacagaagagcagcggcgacagtttagtccaggtccacgcacaact
atgtttcgtattccagagtttaaatggtctcccatgcaccagcgtctcctgacagacttg
ctttttgcactagaaacagatgtacatgtttggagaagtcactccacaaagtcagtgatg
gactttgtcaatagcaatgaaaatattatttttgtacacaacacaatacacctcatttcc
cagatggttgacaatattattattgcttgtggaggaattttaccattgctatcagcagcc
acttccccaactggttctaaggttagtattgccactactgaactggaaaatattgaagtg
acacaaggaatgtcagcagagacagcagtaacgtttctcagccgtctgatggcaatggtt
gacgttctagtatttgccagttctctaaattttagtgagattgaagctgaaaaaaacatg
tcttctggaggtctaatgcgacagtgcctgaggctggtttgttgcgtggctgtgagaaac
tgtttagagtgtcggcaaagacagagagagagagtgaataagacttcactaatcagcagt
aaagctcaggatgctcttcagagtgtaactgcttcagcagcaaccaagactcctcttgaa
aacgtccctggcaatctttctcccataaaagaccctgatcggcttcttcaggatgttgat
atcaatcgtctacgagcagttgtttttcgtgatgtggacgacagcaaacaggctcagttc
ttagctttggcagtagtctactttatttcagttctgatggtctccaaataccgtgatata
ctagaaccacaacgagaaacagcaagatctgggagccaggcaggtagaaatatcagacaa
gaaataaattcaccaacaagtacagttgtggtcataccatctatccctcacccaagtttg
aaccatggattccttgccaagttaattcctgagcagagctttgcccactcattttacaaa
gagacaccaactgcgtttccagaaaacatcaaagataaagaaacaccaacaccagttgaa
gatattcagctggaaagctctattcctcatacagattcaggaattggtgaagaacagatg
cctaatattttgaatggaacagacttggagaccagcacaggccctgatgctatgagtgaa
ctgttgtctactctgtcttcagaagtgaagaaatctcaggagagcttaactgaaagcccc
agtgaaatcttgaaaacctcatcatcgatatccagtatcagccaaagcaaaggcatcaat
gtcaaggaaatactgaaaagtctcgtggcagccccagttgaaattgcagaatgtggtcca
gatccaatcccttaccctgatcctgctctgaagagagaagctcaggctattcttcccatg
cagtttcattcatttgacaggagtgtggtcgtgccagtgaagaagcctccaccaggtagc
ctggctgtgaccacagttggagctgccacagcggggagcgggctgccaccgggtagtaca
cctaatatctttgctgcaacaggagctacaccaaaaagtatgattaatacaacaggtgca
gtagactcaggatcttcttcttcctcttcgtcatccagctttgtgaatggtgctaccagc
aaaaatctccccgctgtccaaactgttgctccaatgccagaggattcagctgaaaacatg
agtatcacagcaaagcttgagagagccttagaaaaggtggcccctctcctgcgagaaatt
tttgttgattttgccccttttctatcccgaacattattgggcagtcatggacaagagctg
ttgattgaaggtctggtttgcatgaagtctagtacttccgtggttgaacttgttatgctg
ctttgttcacaggaatggcaaaattctattcagaagaatgcaggacttgcatttattgaa
ctcatcaatgaaggaagattattatgtcatgcaatgaaagaccatatagtgcgtgttgca
aatgaagcagaatttattttgaaccgacaaagagctgaagatgtccacaagcatgctgag
tttgagtcacagtgtgctcagtatgctgctgacagaagagaggaggagaagatgtgtgat
catcttatcagtgctgcaaagcatcgggatcacgttacagccaatcagctgaaacagaag
atactcaacatcctaacaaataagcatggtgcctggggagctgtttcttatagccaactg
cacgacttctggcgcttggattactgggaagacgatctgcgccggcggaggcgatttgtt
cgcaatgcttttggatctactcattctgatgctcttctgaaagctgctgtggaatatggc
actgaagaagatgtagtaaaatccaagaaaactttccgaagtcaagctgtggtaaatcag
aatgcagaaacggagcttatgctggaaggagatgacgatgctgttagtctactccaagag
aaggaaattgacaaccttgcaggccccgtggtgctgagcacgccggcccagctcgtcgcc
cccgtggtggtggctaaagggacgctctccatcaccaccaccgagatctacttcgaggtg
gacgaggacgacccggccttcaagaagatcgaccccaaggtccttgcctatacagaaggt
cttcatggaaaatggatgttcagcgagattcgggctgttttttcaagacgttatcttctc
cagaacacagctttggaagtgtttatggcaaacagaacttctgttatgtttaattttcct
gaccaagcaacagtgaaaaaagttgtatacagcttgccacgtgttggagtaggaaccagc
tatggattgccacaagccaggagaatctctctggccactccccgacagctttataaatcc
tccaacatgactcagcgctggcaaagacgagagatatctaattttgaatacctgatgttc
ctcaacactatagcaggacgaacgtacaatgatctgaaccaataccctgtatttccgtgg
gtcttaacaaactatgaatctgaagagttagacctgacccttccaggcaacttcagggat
ctttcaaagcctattggtgctttgaacccaaagagagcagtgttctatgcggaacgttat
gagacatgggaagatgatcagacaccaccttaccattacaacacccactattctacatct
acttctacactggcttggcttgttcgtattgagccctttacaacattctttctaaatgca
aatgatggcaaatttgaccacccagatcgaaccttctcttcagtagccaggtcttggaga
aacagccaaagagatacctcagatgtgaaggaattaattccagaattttactatctacca
gagatgtttgtcaacagtaatggctataatctaggaatcagagaagatgaagttgttgtg
aatgatgttgagctcccaccttgggccaagaagcctgaggactttgtccgtatcaacagg
atggccctggaaagcgaatttgtgtcatgtcaacttcatcagtggattgaccttatattt
ggctataagcaacggggaccagaagcagtgcgcgcactcaatgttttccactacctaaca
tatgaaggctctgtgaacctggacagtatcactgatcctgtcctcagggagattccagag
gcttattttattagagatcctcatactttcctccttacaagggaatttattaaggccatg
gaggcgcagatccagaacttcgggcagacgccatcgcagttgctcattgagccccatccg
ccgcggagctctgccatgcacctgtgtttccttccacagagccccctcatgtttaaagat
cagatgcagcaggatgtcataatggtgctgaagttcccatcaaactctccggtcacacac
gtggcagccaacacgctgccccacctgacaattcctgccgtggtgaccgtcacctgcagc
aggctctttgctgtcaatcggtggcacaacacagtaggccttcgaggagccccaggatat
tctttggatcaagcccatcatcttccaattgaaatggatccattgatcgccaataactcc
ggtgtgaacaagcggcagatcacagacctggtggatcagagcattcagatcaatgcacat
tgtttcgtggtcacagcagataatcgctacattcttatctgtggtttctgggacaagagt
tttcgagtttattctacagaaacaggaaaactaactcagattgtgttcggccactgggat
gttgtcacttgccttgccagatcagagtcctatatcggtggtgattgctacatcgtgtct
gggtctcgtgatgctacattgctgctttggtactggagtggccgacatcacattataggt
gacaatccaaacagcagtgattatcctgctcctcgggctgttctgactggtcacgaccac
gaagttgtctgtgtgtcagtctgtgcagagctgggacttgtcatcagtggtgctaaagaa
ggtccttgtctggtacacacaattactggagatttgctgagagccctggaaggaacagaa
aactgtttgtatcctcgcttaatttcagtttctagtgaaggtcactgcatcatctactat
gaacgaggacggttcagcaatttcagcattaatggaaaactcttagctcagatggagatc
aatgattcaaccagggccattctcctgagcagtgatgggcagaacttggtaacaggggga
gacaatggtgtggtggaggtatggcaggcctgtgacttcaagcagctctatatctaccct
ggctgtgatgctggcattagagctatggatctgtctcatgatcagagaactctaattact
ggcatggcttctggcagcatcgtagctttcaatatagattttaaccggtggcattatgag
catcagaacagatactga
DBGET
integrated database retrieval system
