Tympanuchus pallidicinctus (lesser prairie-chicken): 128074870
Help
Entry
128074870 CDS
T08967
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tpai03037
]
128074870 (IFT88)
Cilium and associated proteins [BR:
tpai03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
128074870 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_19
TPR_14
TPR_6
TPR_16
ANAPC3
TPR_11
ARM_TT21_4th
ARM_TT21_5th
TPR_CcmH_CycH
HEAT_Nup120
TPR_15
DUF2989
ARM_TT21_2nd
FumaraseC_C
ARM_TT21_C
DUF6584
Motif
Other DBs
NCBI-GeneID:
128074870
NCBI-ProteinID:
XP_052527106
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MMQNVHLAPEEDEDDLYSGYNDYNPTFDTEDLENDTVFQQAARTSHGRRPPVTAKIPGTA
TSRPIDTAFGDGVSRPMTAVQAAGYTKAAIRGSLFDPLGQARGPAPPLEMKNPDSSEEKI
RQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKERVLVRQREQTATSESINLDLTYS
VLFNLASQYAANEMYAEALNTYQVIVKNKMFNNGGRLKVNMGNIYLKQRNYSKAIKFYRM
ALDQIPSVHKDMRIKIMQNIGVAFIKTGQYMDAVSSFEHIMSLSPNLKAGFNLLVCYFAI
GDSEQMKKAFQKLIAVPLEVDYDDKYVSPNDDPHTNLLLEAIKNDSLRQIERERKSMAED
YIMAAAKLIAPVTEPSFAAGYDWCVEAVKASHYVELANDLEINKATTFLRQRDFNQALET
FKMFERKDSRVKSAAATNLSFLYYLEKELAQATTYADLAVSSDRYNPAALTNKGNTVFAN
EDYEKAAEFYKEALRNDCSCTEALYNLGLTYKKLNRIDGALDCFLKLHAILGNSAQVLHQ
IAAIYEIMEDPNQAIEWLMQLISVVPSDPRALSKLGKLYDKEGDKSQAYHYYYESYRYFP
SNIEVIEWLGAYCIDTQFCEKAIEYFERAALILVHNFVFLMCRPTQVKWQLMVASCYRRS
GNYQKALEKYKVIHQKFPENVECLRFLVRLCTDMGLKEVHEYLTKLKKVEKLKEIREQRI
KSGRDGSARNRREGSADGDAGGSKGERLSARLKALPGTSEPYQSSSSKAIDASYTDPLGP
QAERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaacgtgcatctagctcctgaagaagacgaggatgatctttactctggctac
aatgattataatcccacttttgacacagaggatttagaaaatgatacagtttttcaacag
gcagcaagaacaagtcatggtagaagaccccctgtgacagccaaaattcctggtacagca
acttcaagacctatagatactgcatttggggatggggtttctcggccaatgacagcagtg
caagctgcaggctacactaaggcagctatcagaggttctttatttgatcctcttggccaa
gcaagaggtcctgctccacctctggaaatgaaaaatccagacagctcagaagagaagatt
aggcagttagaaaaaaaagtgaatgaactggttgaagaaagttgcattgccaacagctgt
ggagacttgaaattggctctggaaaaagcaaaagaagctggaaggaaggaaagagtatta
gtgaggcaacgtgaacaaactgctacttcagaaagcatcaacttagatctcacttactca
gttcttttcaatctggccagtcaatatgctgctaatgaaatgtatgctgaagcactaaac
acttaccaagttatagtgaagaataagatgttcaacaatggaggtagactgaaggtcaat
atgggaaatatatatttaaaacagcggaactattccaaagcgatcaaattctaccgcatg
gctctagaccagattcctagtgtccacaaagacatgaggattaaaataatgcaaaatatt
ggagttgcatttattaaaactggccagtacatggatgccgtttcttcatttgagcacata
atgagcttgtccccaaacctgaaggcaggcttcaacctgctcgtatgttactttgctatt
ggagacagcgaacaaatgaaaaaagcattccaaaaactgattgcagttcccttggaagtg
gattatgatgacaaatacgtttcaccaaatgatgatccacatacaaatctactgcttgaa
gccatcaaaaacgacagtttaagacaaatagaacgtgagaggaagtccatggctgaggat
tatatcatggcagctgctaaactgatagcaccagtcactgagccatcttttgctgcgggc
tatgactggtgtgttgaagcagtaaaagcttcccactacgtagagttagccaatgacctg
gagataaataaagccactacttttctgagacaacgggattttaaccaggcactggagact
ttcaaaatgtttgagagaaaggacagcagagtaaagagtgcagctgcaacaaacctttcg
ttcctttattatttggagaaggaattggcacaagcaacaacctatgcagatttagctgtc
agttctgataggtacaacccagcagcactaactaacaaaggaaatactgtttttgcaaat
gaagactacgaaaaagcagctgagttttataaagaggctcttaggaatgattgctcttgc
actgaagcactgtataaccttggtttaacatacaagaagttaaacagaatagatggggct
ttggattgtttcctgaaactccatgcaatacttggaaacagtgctcaggtccttcaccaa
atagcagccatctatgaaatcatggaagatcccaatcaagccatagagtggctcatgcag
ttgatcagtgtagtaccaagtgacccacgtgcgctttcaaaactagggaaattatatgac
aaggaaggtgataaatcccaagcctatcattattactatgagtcataccgttatttccct
tcaaacattgaggtcattgaatggcttggagcctattgcattgacacccagttttgtgaa
aaagccattgagtactttgagagagcagctcttatccttgtgcacaactttgtcttcttg
atgtgcagacctacccaagtgaagtggcagctgatggttgccagttgctatcggagaagc
ggtaactaccagaaagctctagagaaatacaaagtcattcaccaaaaattcccagagaac
gttgaatgcctccgatttttagttcgtctctgcacagatatgggactgaaagaagtccac
gagtatctgacaaaactgaagaaagtggaaaaattaaaggagataagagagcagcgcatt
aaatctggcagagatggcagtgcacgtaaccgcagggaaggaagtgctgatggagatgct
ggtggtagcaaaggggaaaggctgagtgccagactgaaagctttgcctggaacaagtgaa
ccctatcaaagcagcagcagcaaagcaatagacgcttcctacacagacccacttggccca
caagcagaaagacctaaaactgcagcaaggaaaagaacagaagaagatgactttgctgat
gaagaactaggagaggatttgcttccggaataa
DBGET
integrated database retrieval system
