KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128074967
Entry
128074967         CDS       T08967                                 
Symbol
XNDC1N
Name
(RefSeq) protein XNDC1N isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128074967 (XNDC1N)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpai03400]
    128074967 (XNDC1N)
DNA repair and recombination proteins [BR:tpai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     128074967 (XNDC1N)
SSDB
Motif
Pfam: XRCC1_N RNF220
Other DBs
NCBI-GeneID: 128074967
NCBI-ProteinID: XP_052527316
LinkDB
Position
Unknown
AA seq 382 aa
MAPVKISHIVSFSSQDPRYPVENLLSPDGHRPWLSCPQERSRQLRVELQLERAVPIGYID
IGNWGCAFLHIEVGRSSWPLDRPYLTLVPSVTLMTPADSKLDRNRCGVRMFKEADFLELA
AGQKWDRLRLTCSQPFRHRGQFGLCFVRVRTLLEPELCHHAAEDAELMGSPQRSNPASLC
RIPSAEARLSSQEEEQLKSSLQQLEPSAASHAWSPARLSRPARMVLSAAQSRAVRPPPRI
IASHPESSTEQGQPAAQGAALEVPAAPKRARRQSGSRQRAGRAVGRSPQPLTRNPGPGRR
ARTQGRNASGGESSGGEMALCPICSGSFSTALLPAHASRCGEEESDPEVELLSSASSPVL
CPICGLCFSSAEVEQHCSTCGE
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggcaccagtgaagatcagccacatcgtgtccttctcctcccaggacccccggtaccca
gtggagaacctcctgtcccccgatggccatcggccctggctcagctgcccccaggagcgc
agccggcagcttagggtggagctacagctggagagagccgtccccatcggctacatcgac
attgggaactggggctgcgccttcctgcacatcgaggtgggtcgctcctcgtggcctctt
gaccgcccctacctcaccctggtgcccagcgtcacgctgatgacaccggccgactccaag
ctggaccgcaaccgctgcggcgtccgcatgtttaaagaagcagatttcctggagctggca
gcggggcagaagtgggaccgcctgcggctcacctgcagccaacccttccgtcaccgcggg
cagtttgggctctgcttcgtccgcgtgcgcacattgctggagcccgagctgtgccaccat
gcagcggaggacgctgagctcatgggcagcccccagcgctccaaccctgcctccttgtgc
cggattccctctgcagaagcacgcctgagctcacaggaggaggagcagctgaagagcagc
ttgcagcagctggagcccagtgctgcatcccatgcctggagcccagcccgtctcagccgc
ccggcacgcatggtgctgtcagcagcgcagagccgtgccgtgaggcctccaccccgaatt
attgccagccacccggagagcagcacagagcagggacagcctgcagcacagggtgcagca
ttggaagtcccagcagcccccaagcgcgcccgcaggcagtcaggcagcaggcagagagct
ggcagagctgtgggcaggtcccctcagcctctcaccaggaatcctgggccaggaaggaga
gcgagaacgcagggccgcaacgcgagcggaggggagagcagcggtggggagatggctctg
tgccctatttgctcaggttccttcagcacagcgctgctccccgctcacgcctcccgctgc
ggcgaggaagaatccgaccccgaggtggagctgctttcctctgccagcagcccggtgctg
tgccccatctgcgggctctgcttcagctcagcagaggtggagcagcactgcagcacctgt
ggggagtga

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