Tympanuchus pallidicinctus (lesser prairie-chicken): 128075040
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Entry
128075040 CDS
T08967
Symbol
TRIM41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128075040 (TRIM41)
Enzymes [BR:
tpai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128075040 (TRIM41)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128075040 (TRIM41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-RING_6
Nop14
Nrf1_DNA-bind
DUF1664
zf-RING_5
TRAF3_RING
PigL_N
Motif
Other DBs
NCBI-GeneID:
128075040
NCBI-ProteinID:
XP_052527426
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MEAVGDDGASSGRLNPVETLQEEAICAICLDYFVEPVSIGCGHNFCRVCIAQLWGGGGEA
ELEESSGAAALEEEEEEEELEEEEEDELGEEELDVEQEEEEEDGGGEEEEDDMWSEEEED
GELWEDPVEEELWDGGVQGELYFGDDDYDEDVMEEDVEEEEEEEDEAQSPPPPVLPARPR
RLQTFTCPQCRKTFFQRNFRPNLQLANMVQIIRQLHPHPQRLAPPAGPSASGGPGGNPGI
LVATGGRGCPNLCEKHQEPLKLFCEVDEQAICVVCRESRSHKHHSVVPLEEVVQDYKYKL
QSHLEPLKKKLDAVLKQKSNEQEKITELREKMKLEIKEFESDFEVLHQFLIGEHVLLLHQ
LEERYESLLARQSSNISQLEEQSAALSRLIAEAEDKSKQDGLQLLKDIKGTFIRCENIKF
QEPEMVLVDVGKKYRNYFLQDVVMRKMEKAFSKVPQADITLDPDTAHPRLSLSLDRRSVK
LAERRQELPDNPKRFDSDYCVLGSQGFTTGRHYWEVEVGGRKGWAVGAARETARRKEKTM
GPHQKREIWCVGTNGKKYQALTATEQMALSPGERPRRFGVYLDYERGQLCFYNAESMTHI
HTFNASFHERIFPFFRILAKGTRIKICT
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgggcgacgacggggcgtcgtcggggcggctgaacccggtggagacgctg
caggaggaggcgatctgcgccatctgcctggactacttcgtggagccggtgtcgatcggc
tgcgggcacaacttctgccgggtttgcatcgcgcagctgtggggaggaggaggagaggcc
gagctggaggagagcagcggggccgcggcgctggaggaggaggaggaggaggaagaactg
gaggaggaggaggaagacgagctgggcgaggaagagctggacgtggagcaggaggaggag
gaggaggatggaggcggggaggaggaggaggacgacatgtggagcgaggaggaggaggat
ggagaactgtgggaagaccccgtggaggaggagctgtgggacggaggggtgcagggagag
ctctactttggggacgatgattacgatgaggatgtgatggaggaggatgtggaggaagag
gaggaggaggaggacgaagctcagagccctccgccccccgtcctgcctgcccgccctcgc
cgcctgcagaccttcacctgcccccagtgccgcaaaacctttttccagaggaatttcaga
cccaaccttcagttggccaacatggtgcagatcatccggcagctccaccctcacccgcag
cgcctcgcgccgcccgccggcccctcagcctcggggggtcctggggggaatccggggatc
ctggtggcaacgggaggtcgggggtgtccgaatctgtgcgagaagcaccaggaacccctg
aagctgttctgtgaggtggatgagcaagcgatctgcgtggtgtgcagggagtcgcggagt
cacaagcatcacagcgttgtgcccctggaggaggtggtgcaggattataagtacaaactc
cagagccacttggagccactgaagaagaagctggatgcggtgttgaagcagaagtcgaat
gagcaggagaagatcacagagctgagggaaaagatgaagttggaaatcaaagaattcgag
tccgatttcgaggtgctccaccagttcctcatcggggagcacgtgctgctgctgcaccag
ctggaggagcgctatgagagcttgctggcccggcagagcagcaacatcagccagctggag
gagcagagtgcagccctcagccgccttatcgcagaggcagaagataagagcaaacaggat
gggctgcagctgctcaaggacatcaaaggcacttttatcagatgcgagaacatcaaattc
caggagcccgagatggtgctggtggatgtggggaagaaataccgcaactatttcctgcag
gacgtggtgatgaggaagatggagaaagccttcagcaaagtcccccaggccgacatcacg
ctggaccccgacaccgcgcaccctcgcctcagcctctccctggaccgccgcagtgtgaag
ctggcagagcggcgccaggagctccccgacaaccccaaacgcttcgactccgattactgc
gtcctgggatcccagggtttcaccacaggccgccactactgggaggtagaagtcgggggc
aggaaaggttgggcggtgggggctgcacgcgagacggcgagacgtaaagaaaaaaccatg
gggcctcatcaaaaaagggagatctggtgcgtcggcaccaacgggaagaagtaccaagcg
ctgacggccacggagcagatggctttgtcacccggcgagcggccgcggcgcttcggcgtc
tacctggactatgaacggggtcagctttgcttctacaacgctgagagcatgacccacatc
cacaccttcaacgcttccttccacgagcgcatcttcccctttttccgaatcctggctaag
ggcactcgtatcaaaatctgcacctga
DBGET
integrated database retrieval system
