Tympanuchus pallidicinctus (lesser prairie-chicken): 128075142
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Entry
128075142 CDS
T08967
Symbol
EFL1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128075142 (EFL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpai03009
]
128075142 (EFL1)
Ribosome biogenesis [BR:
tpai03009
]
Eukaryotic type
Pre-60S particles
GTPases
128075142 (EFL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
128075142
NCBI-ProteinID:
XP_052527570
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MVLTSVGKMTGLQQKAAGIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYLDSR
EDEQVRGITMKSSAISLHFEKGGQEYLINLIDSPGHVDFSSEVSTAVRLCDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKLTPQEAYMHLKNILEQINAVTGSL
FTSKVLEERAEKEAESESSSDTAAGDQIYDWSAGLEDTDDSHLYFSPDHGNVVFASAIDG
WGFGIEHFAKLYSQKIGIKPAVLLKTLWGDYYLNTKAKKIMKGDQSKGKKPLFVQLVLDN
IWSLYEAVMKRDKEKIEKIVTSLGLKIGPRESRHADPKVHLNAICSQWLPISDAVLSMVC
SKLPSPLDITAERVEKLMCVGAKTFDSLPPETQELKSAFLKCSSEGTAPVIVFVSKMFAV
DVKALPHNKPRPLTQEEIAQRRELAKQRHAGKMAASQGKEVSERPPSENSSEGTGSTGDK
KGEEQQLTDQMDVVTSKAAKQEADNKESFIAFARVFSGVVRRGQKIFVLGPKYDPAESLH
KLSSQCSATEDLPLVPHMSCCTLENLYLLMGRELEELEEVPAGNVLGIGGLQDFVLKSAT
LSTSPACPPFTPLNFEATPIVRVAVEPKHPSDMPQLVRGMKLLNQADPCVQVLIQETGEH
VLVTAGEVHLQRCLDDLKERFAKIEISVSAPIIPFRETITRPPKVDMVNEEIGKQQKVAV
IHQTKEDQNRIPEGIQVDSDGLVTMSTPNKQATLSVRALPLPEEVTRLLEENSDLIRTME
QLSTSLNEDKKAHEIDQKTMDKIKEFKQKLEQNLQGRKWRNAVDHIWSFGPRKCGPNILL
HKFEGYKNSVWQCLENAEKEVSKYGDFDNSIVSGFQLATLSGPMCEEPLMGVCFTVEKWE
MNKVGETLPTKSQNSGECGAVEHKESEDTVSPTSNCTVNVCSENEQEQSSQSVPKSLEKN
SKNKGEVLLMDCYGPFSGQLIATMKEACRYALQAKPQRLMAAMYTCEIMATAEVLGRVYA
VLSKREGRVLQEEMKEGTDVFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIS
SDPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSRNK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggtccttacgagcgtggggaagatgacgggactccagcaaaaggctgccggcatcagg
aacatctgtgtgctggcgcacgtggatcacggcaaaaccacactagcagattgcctgata
tccagcaatgggataatctccagccgcttagcaggaaagttgcgatatctggacagcagg
gaagatgagcaggtccgagggataacgatgaaatccagcgcgatttctttgcactttgag
aaaggtggtcaggagtatctgattaatttaatagactccccagggcatgtggatttttct
tcagaagtatctactgctgtccgactctgtgatggttgcatcatagtggtggatgctgtt
gaaggcgtctgtccacagactcaagcagttctacggcaggcatggctagaaaatattcgt
ccggtattggtgataaataaaattgatcgcttgattgtggagctgaagttaacccctcag
gaggcatacatgcaccttaagaatattttagaacagataaatgcagtcactggatcactc
tttacctcaaaagtcttagaagaaagagctgaaaaagaagccgaaagtgaaagtagttct
gacacagcagctggagatcaaatttatgactggagtgctggattggaagatactgatgat
tcccacctctatttttctccagaccatggaaatgtggtatttgccagtgcaattgatggc
tggggttttggcattgagcattttgcaaaactgtacagccaaaagattggaatcaagcct
gcagtgctgctgaagactttatggggagattattatctaaatacaaaagcaaagaagata
atgaaaggtgatcagtcaaaaggaaagaagcccttgtttgtgcagttggtgttggacaac
atatggagtctatatgaagctgttatgaaaagagataaagaaaaaattgagaagatcgtt
acctcgttgggcttaaaaattggtccccgggaatcacggcatgcagaccccaaagttcat
cttaatgccatttgtagtcagtggctccctatatctgatgcagtcctttctatggtgtgt
agtaaacttcccagtccccttgacatcactgcggagagagtggaaaagctgatgtgtgtt
ggagctaaaacctttgattctttaccaccagaaacccaggaactgaaaagcgcttttctg
aaatgcagtagtgaaggaacggccccagtgattgtttttgtttccaaaatgtttgctgtt
gatgtaaaggcgttgccgcacaataaaccaaggcctttaacccaagaagaaatagctcaa
cgacgtgaacttgcaaagcagaggcatgcaggaaaaatggcagcaagtcaaggaaaggag
gtttctgaaaggcccccaagtgaaaattcatctgaagggactggaagcactggtgataag
aaaggtgaagagcaacagctcactgatcaaatggatgtcgtgacctcaaaggcagcgaaa
caggaagcagacaacaaggagtctttcattgcttttgctagagtgttcagtggtgtggta
cgaagagggcaaaagatctttgttttgggacccaaatatgatcctgctgaatctttgcat
aagctgtcatcccaatgttctgctacagaggatctgcctttagtacctcatatgtcttgc
tgtacgttggagaatctatacttgctcatgggaagagaacttgaagagcttgaagaagtg
cctgcaggaaatgttctaggaataggaggcctgcaagattttgtgctaaagtctgcaact
ttgtcaacatcaccagcttgcccgccttttacacctctcaactttgaggctacaccaatt
gtgcgggtagctgttgaaccgaaacatccaagtgatatgcctcagctggtgagaggaatg
aagcttttaaaccaagctgatccatgcgtccaagttttgatccaggagacaggagagcat
gtgctagtgacagcaggagaagttcatctgcagcgttgcttggatgacctgaaggaaagg
tttgcaaagatagagattagtgtgtcagcacctattattccatttcgagaaacgataaca
agacctccaaaagttgacatggtaaatgaagaaataggaaagcagcagaaagttgctgtc
atacaccaaacaaaagaggaccagaacagaattcctgaaggaattcaggtcgattcagat
gggcttgtcacaatgtctactccaaataaacaagctactctcagtgtaagagcgttgcca
cttcctgaggaggtaactcgacttcttgaagaaaacagtgacttgattcgaactatggag
caactcagcacgtctctgaatgaagataaaaaagctcatgaaatagatcagaagactatg
gacaagataaaggaattcaaacaaaaattagagcaaaatctgcagggaaggaagtggaga
aatgcggttgatcatatctggtcatttggaccacggaaatgtgggcctaatattttgtta
cataaatttgagggttataaaaattctgtgtggcagtgccttgaaaatgctgagaaagaa
gtaagtaagtatggagactttgacaacagcatagtaagtggatttcagctggctacgctt
tcgggtcccatgtgtgaagaacccctcatgggtgtgtgttttacagtggaaaaatgggaa
atgaataaggttggagagacacttccaactaaaagtcagaattcaggggaatgtggtgct
gtagaacataaagaaagtgaagatactgtttctccaacaagcaattgcactgttaacgtt
tgcagtgagaatgaacaggaacagagcagtcaaagtgttccaaagtcacttgaaaaaaat
agtaaaaacaagggagaagttttacttatggattgttatggtcccttctctggacagctg
attgccaccatgaaggaagcttgtcgttacgctttgcaagcaaaaccacagaggcttatg
gcagcaatgtacacctgtgaaattatggctactgcagaagttctaggtcgtgtgtatgcc
gtcttgtccaaaagagaaggcagagtattacaagaggagatgaaagaaggaacggatgtg
tttattattaaggcagtactgccagtagcagaaagctttggttttgctgatgaaatcagg
aagagaactagtggcctggccagtccgcagctggtgttcagccactgggagatcatttca
agtgatccattctgggtaccaaccactgaagaagaatatttgcactttggggaaaaggca
gactctgagaaccaggcccgcaagtacatgaatgcagtgagaaagcgaaagggactttat
gtagaagaaaaaattgtggagcatgctgaaaagcagagaaccctcagtaggaataagtag
DBGET
integrated database retrieval system
