Tympanuchus pallidicinctus (lesser prairie-chicken): 128075206
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Entry
128075206 CDS
T08967
Symbol
NEDD4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04120
Ubiquitin mediated proteolysis
tpai04144
Endocytosis
tpai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128075206 (NEDD4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128075206 (NEDD4)
09144 Cellular community - eukaryotes
04530 Tight junction
128075206 (NEDD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128075206 (NEDD4)
04121 Ubiquitin system [BR:
tpai04121
]
128075206 (NEDD4)
03029 Mitochondrial biogenesis [BR:
tpai03029
]
128075206 (NEDD4)
Enzymes [BR:
tpai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128075206 (NEDD4)
Membrane trafficking [BR:
tpai04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128075206 (NEDD4)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
HECT type E3
128075206 (NEDD4)
Mitochondrial biogenesis [BR:
tpai03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
128075206 (NEDD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
128075206
NCBI-ProteinID:
XP_052527696
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MARRLRLHFATQRRNTDLLSETSEDVLDSNNQTYFKKTQNSGPNVTQMKLASRQVACAPV
MQQVINQEGNATISSLQKKKSTSLHISLQSRRYSGCFRSGDAAATGSDASFIGICNEGNH
GVRTVVDHQANDSQLSNTAVCIGSLNSTAASDNGSFSSAGSDYGSCASTTSDGGSYSNSI
ISDSGSGTLLTSGGSFCCSVVHSDSSYGNAANKYSPYRNSSSQEEIEVCRINTAFDQEAL
SVRKKTKVPLRRCSSLVIFPRSPSSTPPASPVTSGQMPHKGAYQTSHKLIIFPSELARKE
DQTVSKGFLSTAVNGLRLSKTVCASGEARDIRPLYSHTSLQDKSQILNSSEQAAREEIAD
SLSCISVHLTPRAFASSSEMVNGCCSQELNLNSSAKYPPLKLARSTSACLPSKIDSEYQM
NINELGRPNAQMSKAHHVLQRSVSLEGSRQKVSCCLSSLKYKCHNAGTSQLHIQFKAGNE
GKTSGVKKRYGTSKREISSTSLWRPHKTRDDFLGQVDIPLYQLPTEHPSMERPYTFRDFV
LHPRSHKSRVKGHLRLKMTYLPKSNGSEEETTEQAEELEPGWILLDQPDASSQPQQQQQE
SPPLPSGWEERQDILGRTYYVNHEFRRTQWKRPTAQDNVAVADIGNVQLEAQHAFTHRRQ
ISEDTENLDSRDSPESWEIITEDEATLYSNENPQIPLPQNSCDIQTHLAEELNTRLNTSG
SSATGQSAAYTNHSSRRGSLQTYRVEEQPAHPVLLPTSSGLPPGWEERQDEKGRSYYIDH
NSRTTTWIKPVVQIAMEAGQLPTAQNTSIARQPQATSGDSSQQCSNQQPEVEQGFLPKGW
EVRHAPNGRPFFIDHNTKTTTWEDPRLKIPAHLRRKTSLDPVDLGPLPPGWEERTHTDGR
IFFINHNTKKTQWEDPRLQNVAITGPAVPYSRDYKRKYEFFRKKLKKQSDIPNRFEMKIH
RTTILEDSYRRIIAVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLLSKEMFNPYYGLF
EYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKP
ITLHDMESVDSEYYNSLRWILENDPAELDLRFIVDEELFGQTHQHELKSGGSEIVVTNKN
KRDYIHLVIQWRFVSRVQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVADW
KLHTKYKNGYSVNHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQ
LFTVEQWGTPEKLPRAHTCFNRLDLPPYDSFEDLWDKLLLAIENTQGFDGVD
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacggttaagattgcattttgcaacccaaagaagaaacacagatctgttatcg
gaaacctccgaagatgttttggatagtaacaatcaaacgtacttcaaaaagacacagaat
tctggacctaatgttacacaaatgaagctggcttctagacaagttgcatgtgcacctgta
atgcagcaagtaattaatcaagagggaaatgcaactatttcttcactgcagaaaaaaaag
agcacatcactgcacatttctctgcaatctagaaggtacagtggatgttttcggtctggt
gatgctgcagctactggcagcgatgcttcattcatcggtatttgtaatgagggaaatcat
ggcgttagaactgtggttgatcatcaagctaacgatagccagctgagcaatactgctgtg
tgcatcggcagtcttaacagtactgcagccagtgacaatggatccttcagcagtgctggc
agtgactatgggtcatgtgcaagcaccacgagcgatggaggttcgtatagtaacagcatc
atcagtgacagcggcagcggcactctcttgacaagcggtggttctttctgttgtagtgtt
gtacacagtgattcgtcatatggaaacgctgcaaacaaatatagcccatacagaaacagt
tcatctcaggaagaaatagaagtgtgtagaattaatacagcttttgaccaagaagctttg
tcagtgaggaagaaaactaaagttcctctgcggcggtgttcatcgttggtaattttcccc
agaagtccttccagtactcctccagcgtctccagtaacctcaggtcagatgccacataaa
ggtgcctatcaaacatcacataaactgattatttttcctagtgagctggcacgtaaggaa
gatcaaactgtttccaagggattcctttcaacagcagtcaatggacttcgactgtctaaa
acagtttgcgcatctggtgaagctagagacataagacctctttactcgcatacatcatta
caggacaaaagtcaaattttgaacagttctgagcaggcagctcgtgaagaaatagctgac
agcctctcatgtatttcagttcatctgactccaagagcatttgcatcaagcagtgaaatg
gttaatggctgttgcagtcaagagttaaatctgaactccagtgcaaaataccctccttta
aaactggcacgcagcacatctgcatgtttaccctcaaaaatagattcagaataccagatg
aatataaacgaactgggaagaccgaatgcacagatgagcaaagcccaccatgttttgcaa
agaagtgtttcattggaaggatcacgtcagaaagtttcttgctgtttatccagtcttaaa
tacaagtgtcataatgcagggacgtctcagttgcacatacagttcaaagctgggaacgaa
ggaaaaacaagtggtgttaagaaaagatatggaacctctaaaagggaaatatctagcact
tctttgtggaggcctcataagactcgagatgattttcttgggcaagtggatattcccctt
tatcagttaccgacagagcatccaagtatggagagaccatatacctttagggattttgtt
cttcatccaagaagccataaatcaagagttaaaggtcaccttagattaaagatgacttac
ttacctaaaagcaatggatctgaagaagaaaccacagaacaggccgaggaattggagcct
gggtggattttactggaccaaccggatgcttctagccagccacaacagcagcagcaggaa
tctcctccactgccttcaggttgggaagaaaggcaagacatccttggcaggacctattat
gtcaatcatgaattcagaagaacacagtggaaaagaccaactgctcaggacaatgtagct
gtagcagatattggtaacgtgcagttggaggcccagcatgcgttcactcatcggcggcag
atatcagaagatacagaaaatctagacagcagagattctcctgagagctgggaaattata
actgaagatgaggcaacattgtatagcaatgagaaccctcaaatacctctgccacagaac
agttgcgatatacagactcatcttgcagaagagctgaataccagacttaacacctctgga
agttcagctactggccagtcagcagcctacactaaccattccagcagaagaggtagtctg
caaacatacagagttgaggagcagcctgcacatccagtgttactgcctacttcatctgga
ttaccgccaggctgggaagaaagacaagatgaaaaagggaggtcatattacatagatcac
aattccagaactactacttggataaaaccagttgtacagattgctatggaagcaggtcag
ttgccaactgcacaaaatacttctatagcaagacagccacaagcaacatcaggtgattca
tcacaacagtgttctaatcagcagcctgaagtggagcaaggatttctccctaaaggctgg
gaagttcggcatgcacctaatgggagaccgttctttattgaccacaacaccaaaactaca
acatgggaagatccgagactgaaaattcctgctcatctgaggagaaagacttccctagat
ccagtagatctagggccattaccaccagggtgggaagagagaacacacacagacggaaga
atattcttcataaaccacaataccaagaaaacacaatgggaggatcctcgactgcagaac
gtggcgataactggaccagctgtgccttactccagggactacaagaggaagtatgagttc
ttcagaaagaaactgaagaaacagagtgatattccaaacagatttgaaatgaaaattcat
cgcacaacaatccttgaagattcttacagaagaattatagctgtgaagagagcagatttc
cttaaagcaagactttggattgagtttgatggtgaaaaaggtttagactatggaggagtg
gccagggaatggttcttccttctctctaaggagatgttcaatccttactatggattgttc
gaatattcagctacagataattatactctgcagatcaacccaaactctggactgtgcaat
gaagatcatctctcttatttcaagtttataggtcgagtagctggaatggctgtttaccat
ggcaaacttttggatgcatttttcatccgtcctttctacaagatgatgctccaaaagcca
ataacgcttcatgatatggagtctgtggatagtgaatattacaattctctgagatggatt
cttgaaaatgatccagcggaactggacctcagatttatagttgatgaagaactttttgga
cagacccatcaacatgaactaaaaagtggtggatcggaaattgttgtcaccaacaagaac
aagagagactacattcatcttgtaattcagtggagatttgtgagcagagtacagaaacaa
atggcagcgtttaaagagggcttttttgaactaatacctcaggatctgattaaaattttt
gatgaaaatgagctggagttactgatgtgtggactgggagatgtggatgtagctgattgg
aaactacatacaaaatacaaaaatggctacagtgtaaatcatcaagtaatacagtggttt
tggaaggcagtcttaatgatggactctgaaaagagaataagattactacaatttgttact
ggcacgtcacgtgtacctatgaatggatttgctgagctttatggttcaaatggaccacag
ttgtttacagttgaacagtggggtacccctgaaaaattgccaagagctcatacctgcttc
aatcgcttggatttgcccccgtatgattcatttgaagatttatgggataaacttcttcta
gcgattgaaaatactcagggctttgatggggtggattaa
DBGET
integrated database retrieval system
