Tympanuchus pallidicinctus (lesser prairie-chicken): 128075216
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Entry
128075216 CDS
T08967
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpai03016
]
128075216 (TARBP1)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128075216 (TARBP1)
Enzymes [BR:
tpai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
128075216 (TARBP1)
Transfer RNA biogenesis [BR:
tpai03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128075216 (TARBP1)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
128075216 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
DAHP_synth_1
Motif
Other DBs
NCBI-GeneID:
128075216
NCBI-ProteinID:
XP_052527715
LinkDB
All DBs
Position
Unknown
AA seq
1581 aa
AA seq
DB search
MEVVLADALLARGGDPGELLRAVCAPLSADRAEALRLLLQRLAAGGPRGEAEGEALRRAA
WEVALERCRPLLRLGEGAAGGAERLRLGRAARGALRYCVQLCGAPLAARLARDALAELAG
GGPGAEAAVEALAAAALRLEEPALVARCAAVALALVREEGEGEAAAALVAGRLLPALGGN
GPAFRRVWDGLLGGGPAPRAGRALLALSALADALLPPRGPGAAADARLCPRFWRLVQEGL
TERDGLCRKRARYLLKRAVDLSGAQSACLRCPSDGPDESSLFWWSAEEDEKLLQFWETYI
LIMETLEGNQIHVIKPVLPKLNSLYELAISGEKGCWLFHPSWHMCIYKRMFESENKSLTK
EGVLHFLELYETKHLPNSLGFSEFIIGPLMDALSESSLYSRTPSQLMGACPPLGMRLQKF
LATYLMLLPEEEKGGFLLKFIQKMTNRHWCAVPILFLSMALAYIPACKVLGTDGLHALRD
VLQCTMITHQILLRGAAQCYLLQTAMHLTDVEKVSLPEVASFLLSLRPEESLRRDTTLWV
ELCSWLQVNDGCFGKSVCSDFEHQEISSLCLYVSSLVREYLKTPVSEGENCSMPDWFEAK
LVATMILLAADVEWMRNKSSGKSNIKWIELEAFLNPLLDVLMKLGSNAYIPTLKTDKSLQ
LLLKLLQTRSLKCSNTQDDEVLFFIWKSLVTPVESILEFILRRLTANELRTVSDLDRCDL
YLALVPEIVNLCLQLSSKKLTTVKNFISSLTNASIHNFQGTNSAEELKLKEQIKKVTSIA
SLTVVCELVDQKPEAHLEDLPCVGALKRFAASSQFNEVLKKPSYIEEKSGLCEETSQGWG
RIVARYVRDQWICLRFVLNKLPVLAQEYEEGTSELLLFTAQRSKEILGSALEALTILPSD
HVLPVFDCMKVLVPKLLSLQESLCIEAFDLAWKIISSLSNTQLIFWSNLKAFVRFIFDNE
VLTAAVSAKGPAYAKIKEIILKLIDMSTTKTGVFNVVLSHCCQSWILPTCGNRSSVRNPF
LNAGNYCELIIEGCVFGTVFRRDQRLIQDVHAFIENLGENCAANVVTESTNRDDHYVRIC
AIKFLCLLDGSNILHKSFMEDIVIKLLEKDELVSRSRTRYYANSLQHRIKNRVWQTLLVL
LPKLEQNFLCGILDKVFQAGFSNNQASVKYFIEWIVILSLHKYPQFLNKFWDCFCYDEEK
LKTSICTFLSVLPHFDTILQNTSEKKPIVKKALLVVLQWCFNHNFSVRLYALVALKKIWG
MCRMLDVEEFEALSPVIESSLQQVENMHGTGNARRNWQRIQDHFFFATFHPLEDYSLETI
FCTLPRLSEVAEDEWISLCKFERFTDIPLPPAFQWYRSRAELLDLKLSDWSQQDTGSSSV
DTDGQTEWTDVQKKIIPWKHSTPTSDLEMVLQDRAAKLGKSNSRLIVVASLIDKPTNLGG
LCRTSEIFGASALVVGSLHYVQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGYT
AIGVEQTAKSYDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHV
SGALLIWEYTRQQVIKHKQQK
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggccgacgcgctgctcgcccgcggcggggatcccggcgagctgctg
cgggccgtgtgcgcgccgctctccgccgatcgcgcggaggcgctgcgcctcctgctccag
cgcctggccgccggcgggccgcggggggaggcggaaggcgaggcgctgcggcgggccgcc
tgggaggtggcgctggagcggtgccggccgctgctgcgcctcggggagggggcggcgggc
ggcgcggagcggctgcggctgggtcgggcggcgcggggcgcgctgcggtactgcgtgcag
ctctgcggagcgccgctggccgcccgtctggcccgcgacgcgctggccgagctggcgggc
ggcgggccgggcgcggaggcggcggtggaagcgctggcagcggcggcgctgcggctggag
gagccggcgctggtggcgcgctgcgcggcggtcgcgctggcgctggtgcgcgaggagggc
gaaggcgaggcggcggccgcgctggtggccgggcggctgctgccggcgctgggcggcaac
gggccggcgttcagacgcgtgtgggacgggctgctgggtggcggcccggcgccgcgggcc
gggcgggcgctgctggcgctgagcgcgctggccgacgcgctgctgccgccgcggggcccg
ggggcggcggcggatgcgcggctgtgtcctcgcttctggcggctggtgcaggaggggctg
actgagcgggacgggctgtgtcggaagagggcccgctacctgctgaagcgcgccgtggac
ctcagcggcgctcagtccgcctgcctgcgctgcccttcggacggcccggacgaatcaagt
ctgttttggtggtctgctgaggaggatgagaaactcctgcagttctgggaaacttacatt
ttgataatggaaactttggaaggaaaccagatccatgtcataaagccagtattacccaaa
ctaaacagtttatatgagcttgctatatcaggagaaaaaggttgttggttgtttcaccca
tcgtggcacatgtgcatctataaaagaatgtttgagagtgagaataaatcactgacgaag
gaaggagttcttcattttttggagctttatgagacaaagcatcttccaaattcgcttggt
ttttcagagtttattattggaccattaatggatgccctctcagaaagttccctttatagt
aggacgccaagtcagctaatgggagcctgtcctcctttgggaatgaggctgcagaaattt
ttggctacttatctgatgcttcttccagaagaagaaaaaggcggtttcctgttaaagttt
attcagaagatgacaaatcggcattggtgcgctgttcccattttgtttctttctatggct
ctagcatacatccctgcatgtaaagtactgggcactgatggacttcatgctttaagagat
gtcctccagtgtaccatgattacacatcagattttgttgcgtggagctgctcagtgctat
cttcttcaaacagccatgcatttgacagacgtggagaaagtgtctcttccagaggttgcc
agctttcttttgtcccttagaccagaggagtccctaaggagagataccacgttatgggtg
gagctttgcagttggctgcaagtgaatgacggatgctttgggaagtcagtgtgctctgat
tttgagcatcaggagatctcatcactgtgtctgtatgtgagcagtcttgtgagagagtac
cttaagacacctgtgtctgaaggagaaaattgctctatgcctgactggtttgaagctaag
cttgttgcaacaatgattctgttggctgctgatgtggagtggatgaggaataaatccagt
ggaaaaagcaacataaaatggattgaactagaggctttcttgaaccctcttctggatgtc
ttgatgaaacttggcagtaatgcttacataccaacactgaaaacagataaaagcctacag
cttctcttgaagttattgcagacccgttcgttaaaatgttccaatacacaagatgatgag
gtactgttttttatctggaaatctttagtgacacctgtggagagtattcttgaattcata
ctccggcggcttactgcaaatgagttaaggacagtcagtgacctggatcgttgtgaccta
tacttagctttagttccagagattgtgaacttgtgcttgcaactcagctcaaagaagtta
acaactgtcaagaatttcatctcatccctgactaatgcctctattcataattttcaggga
acaaattctgcagaggagttgaagcttaaggaacaaataaaaaaagtaactagcatagcc
tcactcacagtagtttgtgagctagtggatcagaaacctgaagcacatcttgaagatctg
ccttgtgtgggtgctctgaagagatttgctgcctcttcccagtttaatgaagtattaaag
aaaccatcttacattgaagaaaaaagtggcttatgtgaggaaacatctcagggatgggga
agaattgttgcacgctatgtacgtgaccagtggatttgcctgcgttttgttttaaataaa
cttccagtgttggctcaagagtatgaagaaggaacttcagaactgttgttgttcactgct
caaagatcaaaagaaattctagggtctgcactggaagccctaactattcttccttcagac
cacgttttacctgtgtttgactgcatgaaagtccttgttcccaagcttctgagcttacag
gagtctctctgcatagaagcattcgatttggcttggaaaatcatatcctctttgagcaat
acacagctaatattttggtctaatctgaaagcttttgttcggttcatctttgataatgag
gttctaactgctgctgtaagcgcgaagggcccagcatatgccaagataaaagagataata
ctcaagctcatagatatgtccactacaaaaactggagtcttcaatgtagtccttagtcat
tgttgtcaatcatggatacttcccacttgtggtaacagaagctctgtgagaaatcctttc
ttaaatgctgggaattactgtgaacttatcatcgagggctgtgtcttcggaactgttttt
aggagagatcaaagacttattcaggatgtgcatgccttcatagaaaatcttggagaaaat
tgtgcagcaaatgttgttactgagagtacaaaccgagacgatcactatgtacggatttgt
gctattaaatttctgtgcttgttggatggatcaaatatcttgcataagagctttatggaa
gacattgtcatcaaactacttgagaaagatgagctggtgtccagatctagaacacgctat
tatgcaaactcattacagcatagaattaaaaaccgggtatggcaaacactcctcgttctt
cttccaaagctggaacagaatttcttgtgtggaatccttgacaaagtctttcaggctgga
tttagtaacaatcaagcatctgtgaagtacttcatagaatggattgttatcttgagtcta
cataaatacccccaatttctcaataaattttgggattgcttttgctatgatgaagaaaag
cttaaaacaagcatctgtacgtttttatcagtgttaccacattttgacaccattcttcaa
aatacctcggagaagaagccaattgtgaagaaggccctcctggtagttctgcagtggtgt
ttcaaccataatttcagcgtcagactttatgcactagttgcacttaaaaaaatctggggt
atgtgcagaatgttggatgtggaagaatttgaagccctgtcaccagttattgaatcgagc
cttcaacaagtggaaaacatgcatggcacagggaatgctagaagaaactggcagagaatc
caggaccatttcttctttgcaacatttcatccacttgaggactacagtctagagacgata
ttttgtactcttccacgcctttcagaagttgctgaggatgaatggatctctctctgtaaa
tttgagaggttcactgacattcctttgccaccagcatttcagtggtatcgttctcgagct
gaacttcttgatctaaaactaagtgactggtctcagcaagacacaggttcaagttcagtt
gacacagatggccaaacagagtggactgatgttcagaaaaagatcataccctggaaacat
agcactcctacttcagacctggaaatggtattgcaggaccgtgctgctaagctgggtaaa
tcaaacagcagactgattgtggtggcttcacttattgataaacctaccaatttaggaggt
ttatgccgtacaagtgagatatttggggcatctgcactagttgttggcagccttcattac
gtgcaggacaagcagttccagcatctgagcgtttctgcagagcagtggctcccccttgtc
gaggtgaagccctctcagcttgttgattatttacagcagaagaagacagaaggctacact
gctattggagtggagcagacagccaaaagttatgatcttacagaatattgctttccagag
aagtcactgttattgctggggaatgaacatgaaggaatcccagcaaacctgattcaccac
ctggatgtctgtgtggaaattcctcagcagggtattattcggtcactcaatgttcatgta
agtggagctctgctgatctgggaatacacaaggcaacaagtgatcaagcacaaacaacag
aaataa
DBGET
integrated database retrieval system
