Tympanuchus pallidicinctus (lesser prairie-chicken): 128075232
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Entry
128075232 CDS
T08967
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128075232 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
128075232 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
128075232 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
128075232
NCBI-ProteinID:
XP_052527728
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MVDSLIVSLRLLSSLAVLGFQFVIPQPSIEHRKVPQRIEEQRDASEDSGAGIPGMWGSWG
PWSACSRSCSGGVMEQTRPCLPAYYRERGYQRPGRPYAASERTLAHQSSRHQDSLTAYPG
HVISAIRTSVPLHRNEEQLRAGLRASVASEGHNNSHMSRGAPRGSRHSQSQRHHPKAEKR
SRNRNPIGPGKYGYGKVPYILPLQTDTGQQPQKLRRQRQSSRNNVFHQSPSLMNTYSQPA
SPSLQHGNLYQEESGPQAGHQVLGPSVYQSSSFPVSQNLFHSSDSTLHGSASHLMVQGQP
QPQRAAAIVCVGTYKQYKLCNTNTCPESSRSIREVQCASYNNKPFMGRFYEWEPFAEVKG
SQKCELNCRAIGYRFYVRQAEKVIDGTPCDQNGTSICVAGQCKSIGCDDYLGSDKVIDKC
GICGGDNTACKVVSGVFKHTLTNLGYHKIVEIPEGATKINITEMSKSNNYLALRSRSGRS
IINGNWAIDRPGRYEGGGTMFTYKRPNEISSTAGESFLADGPTNEVLDVYMIHQQPNPGI
HYEYIIPGDNVISPQLLAHRRPGEPLNGQLEMPESTNHNEEDLHRETDTITGQSVGTFPV
IQPGRFPSHQPENQVPAVQLSRQNREYNWKQIGKTECTTTCGKGSQYPVFHCVNRVTHEE
VPENYCDSSTKPIPEEEACNIFPCPAFWDIGEWSECSKTCGLGMQHRQILCRQIYANRTL
TVQQYRCHHLEKPETTSTCQLKICSEWQIRTEWTSCSVPCGVGQRTRDVKCVSNLGDVVD
DEECNMKLRPNDIENCDMGPCAKSWFLTEWSDRCSAECGDGIRTRSVVCMTNHVSSLPLE
GCGNNRPSETTPCNNGPCAGKVEWFAGSWSQCSTECGGGTQQREIICVRKTEGNFDVLNP
YECSYLERPPSQQSCYLKPCGSKWFHTEWSTCSKSCEGGFRVREVRCLSDDMTTSTHCDP
QLKPEEKEPCNTQDCIPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCASCTRVANRQS
GFLGHR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatagtttctttgagacttctcagttcactagcagtgctgggattt
cagtttgtcatcccacagccttcaattgaacacagaaaggttccccagaggatagaagag
caaagagatgcatctgaagatagcggtgcgggaatcccaggcatgtggggcagctggggc
ccctggtctgcctgttccaggagctgcagtggcggtgtgatggagcagacgaggccgtgc
ctcccggcgtactaccgtgaaaggggctaccagaggccggggcggccatacgcggcctcg
gagagaactcttgctcaccagagctcccgccatcaggactcactgactgcttacccaggc
cacgtcatttctgccatccgtacgtctgtgccgcttcacaggaatgaagagcagctccgg
gccggcctgcgggcttctgttgcttctgaaggccataacaacagccacatgagccgagga
gctcccagaggcagccggcactctcagtcccagaggcatcaccccaaggcggaaaagaga
agcagaaatagaaatcctattggtccaggaaaatatggatatggaaaagtgccatacatt
ttacctttacaaactgatactggtcagcagcctcagaaacttcgaaggcagcgtcagtca
tcaaggaacaacgtatttcatcagagtccaagtctcatgaatacttacagccagccagcc
agcccttcactccagcatgggaacctttatcaagaagaaagtgggcctcaggctggtcac
caggtcctgggaccttcagtttatcagtcatcttcatttcctgtatctcagaacttgttt
catagcagtgactcaactcttcatgggtctgcatcacacctgatggtccagggtcagccc
cagcctcaaagggctgcagctattgtatgtgttggcacctacaagcaatataaactctgc
aacacaaacacgtgtcctgaaagcagtagaagtattagagaagtgcagtgtgcatcatac
aataacaagccatttatgggacgattttatgaatgggaaccttttgcagaagtgaaggga
agtcagaagtgtgagctgaattgccgtgctataggctaccgattctatgtgagacaagct
gaaaaggtgatagatgggacaccgtgcgaccaaaacggaacttcaatctgcgtggcaggg
cagtgcaagagcattggctgtgacgactatctgggttcagacaaggtgattgacaagtgt
ggaatatgcggaggggacaacactgcttgcaaagttgtttctggagttttcaaacacaca
ctaacaaatctcggctatcacaagatagtggaaattcctgaaggagctactaaaattaac
attactgagatgtcaaagagcaacaactatttggccttgcggagtcgatcagggcggtcc
atcatcaatggaaactgggcaattgatcgacctggaagatacgaaggtggtgggacaatg
ttcacttataagcgcccaaatgaaatatccagcactgcaggagagtcctttttagctgat
ggtccaacaaatgaagtcctcgatgtctatatgatacaccagcagcctaacccaggtata
cattatgagtatatcattccaggagacaatgtcatcagtcctcagttgcttgctcacagg
aggccaggggagcccttgaatggtcaattagaaatgcctgaaagtacaaatcacaatgag
gaggatttgcatagggagacagacactatcactggacagtcagttggaactttcccagtt
attcagccaggaagatttccttctcatcagccagaaaaccaggtgcctgctgtgcagcta
tcaagacaaaaccgagaatacaactggaaacagattggaaaaactgagtgtaccactaca
tgtgggaaagggtcccagtacccagttttccactgtgtcaacagagtcacacatgaggaa
gttcctgagaattactgtgacagcagcaccaaacctattcctgaagaggaggcctgcaac
attttcccatgtccagctttttgggacataggggagtggtctgagtgcagcaaaacatgc
ggccttggcatgcagcatcgacagatcttatgtaggcaaatatatgccaaccgtaccttg
acagttcagcagtaccgctgccatcacctggagaaaccagagaccaccagcacttgccag
ctgaagatctgcagtgagtggcagattaggacagagtggacttcatgttcagtaccttgt
ggagtggggcagaggactcgagatgtgaaatgtgtcagcaatcttggagacgttgttgat
gatgaggagtgtaacatgaagctgcggccaaatgatattgagaactgtgacatgggacct
tgtgctaagagctggtttcttacagaatggagcgacaggtgctctgcagaatgtggtgat
gggatccgcacacgttcagtggtgtgtatgaccaatcatgtcagcagtttgcctctggaa
ggctgtggcaataacagaccctctgaaacaactccctgtaataatggaccctgtgctggt
aaagtggagtggtttgctgggagctggtcacagtgctctactgaatgtggtggtggaact
caacagagggaaatcatttgtgtcaggaaaactgaaggcaattttgatgttttgaacccc
tatgaatgctcatatttggaaagacctcccagccagcaatcctgctacctcaaaccctgt
ggatctaaatggtttcatacagaatggagcacatgttccaagtcctgtgaaggaggattt
agagttcgagaggtacgatgcctatcagatgacatgacaaccagtactcactgtgatcca
caacttaaacctgaagaaaaagagccatgtaacacacaggactgtatccctgaaatagat
gagaactgcaaagataaatactacaattgcaatgtggtggttcaggcccggctttgtgtc
tacacctattacaaaacagcctgttgtgcatcctgtacacgtgtggcaaatagacagtct
gggtttctaggacacagataa
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