Tympanuchus pallidicinctus (lesser prairie-chicken): 128075346
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Entry
128075346 CDS
T08967
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128075346 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128075346 (NEIL1)
Enzymes [BR:
tpai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
128075346 (NEIL1)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128075346 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
128075346
NCBI-ProteinID:
XP_052527941
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MPECPELHLAGRYINEACGGLVFEGGVQRSVVGRGPEVPFSSEAYRVTAVSRGKELRLTL
EPLDPGPSQALVFRFGMSGSFRLCEASSPPRHAHLRFFTRESPPRALCFVDPRRFGTWRL
GEEWQPDRGPCVLLEYEAFRENVLTNLEDKAFDKPICEALLNQKYFNGIGNYLRAEILYR
AKIPPFEKARTVLEALKHREQNSSLTLSKKLKLKRDNPDLLELCHTVPMEVVAADKNLLD
PSDSDNYAAFKNWLQCYLVPGMSSLRDRNNRTIWFQGEPGPMAPKGQKSRKKHAHLKADP
EAPTPTVTTRASKRRSGGAEKPLEPAVKEEEEKAVPDGSRKGRARGRKKVAAAPTLSEPD
VPPVRAKRNRTSARRGRGAAAVV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgccggaatgcccggagctgcacctggccggccgctacatcaacgaggcgtgcggcggg
ttggtgttcgagggcggcgtgcagcgctcggtcgtgggccgcggcccggaggtgccgttc
agcagcgaggcctacagggtgacggccgtctcccgcggcaaggagctgcggctgacgctg
gagccgctggaccccggcccttcgcaggccttggtgttccgcttcggcatgtcgggttcg
ttccggctgtgcgaggcctccagcccgccccgccacgcgcatttgcgttttttcacccgt
gagagccccccccgcgccctctgcttcgtggatccccggcgcttcggcacctggcggctg
ggagaggagtggcagcccgaccgcgggccctgcgtcctgctggaatacgaggccttcagg
gagaacgtgctgaccaacctggaggataaagctttcgacaagcccatctgcgaggcgctg
ttaaaccagaagtatttcaatgggatcggcaattacctccgtgctgagatcctgtacagg
gcgaagatccctccttttgaaaaggcccggactgtgctggaagccttgaagcatcgggag
cagaattcttccctgacattgagtaagaagctgaagctgaagcgagataacccggatctc
ctggagctgtgccacacagtgcccatggaggttgtggcagcagataaaaatctcttagac
ccttctgactcggataactatgctgccttcaagaactggctgcagtgttacttagtgcct
ggcatgagctccctgcgggaccgcaacaacaggaccatatggttccagggagagcctggc
cccatggctcccaaaggtcagaagtcccgcaagaagcacgcacacctgaaggcagatcct
gaagctccaacccccacggtcacaacacgtgcctccaaacggcgttctgggggtgcagag
aagcccctggagccagctgtgaaggaggaggaagagaaggcagtgcctgatgggtcaagg
aagggacgtgcccgtgggaggaagaaagtggctgctgctccaaccttatctgagccagat
gttcctccagtcagagcaaaaagaaaccggacttcagcacgcagaggcagaggtgcagct
gctgtagtgtga
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