Tympanuchus pallidicinctus (lesser prairie-chicken): 128075503
Help
Entry
128075503 CDS
T08967
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128075503 (CHD2)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128075503 (CHD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
Myb_DNA-binding
DTHCT
CHDCT2
Motif
Other DBs
NCBI-GeneID:
128075503
NCBI-ProteinID:
XP_052528279
LinkDB
All DBs
Position
Unknown
AA seq
1902 aa
AA seq
DB search
MAGTCPSPFSYVPNQDYHGAGMQLTLVAGSLVLPEEEDVDSGIAKLASSYPKIGVMLLAP
FSTVLLGMIYFQSSEDPVHAGSSKSHSASEEASGSDSASQSESEQGSEQGSESNSSSESS
ESQSESESESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKDEASSESENESPKRRGQKQVKRKKKWKREISGEEEDEDGGDQGTSAESEPEPKRI
KAKRPVQRRTMAKTNVKKPPKLQRGKKRKRQVSSEDDDDDEDGETPKRQTRRRAAKNVSY
KEDDDFETDSDDLIEMTGEGADEHEDNSETIEKVLDIRLGKKGATGASTTVYATEANGNP
SADFDPEKDEGEVHYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWL
AKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSATGHADFPANSRKTSSNDPEY
LCKWMGLPYAECSWEDEALISKKFQHCIDSFNNRNNSKTIPTRDCKVLKQRPRFVALKKQ
PSYIGSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY
GPFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALI
TTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKV
EQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE
NERENGIETLQSLIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTIKHYP
FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDN
NSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSA
TDELLSQFKVANFATMEEEETELDERPQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPR
IRSSTKKAQTNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFT
DAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQL
KENPGETGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPADPEERKKYRLTCR
VKAAHFDVDWGVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQ
TRVDYLLKLLKKDLEKKENMKDGEEGKLKKRKPRIKKENKAPKVKDEHGNELSPPRHSDN
QSEEGEVKDDGLDKSPVKKKQKKKENKENKEKQTSTKKEKESDKEKKKTKEKKEKPKGGE
AKSGSKGKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDK
GLTVQEQLEHTRNCLLKIGDRISECLKAYTDQDLIKLWRRNLWIFVSKFTEFDARKLHKL
YKMAHKKRSQEEEEQKKKEDMASMPSVKKPFRPEPSGSSRDPAMAQSHVPHNPHSQKLHM
PPSHAQQQMHGHPRESYGHPPKRHFSNTDRGEWQRDRKFSYSGNSNQMWGGERHHQYEQH
WYKDHHYGDRRSRGEPHRSSGNYRPNNLSRKRPYEQYSSDRDHRGHRDYYDRHHHDSKRR
RSDEFRPQNYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHTDKPGDYKQPLPPPHPSVSD
PRSPPSQKSPHDSKSPLDHRSPLDRSLEQKNNPDYNWNIRKT
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atggctggaacatgtcccagccccttcagctatgttcccaaccaggattaccatggggct
ggaatgcagctgacccttgtggcaggatcattggttttgccagaggaggaggatgtggat
tcaggtatagccaaactggcttcttcctatcccaaaattggagtcatgctgctggcccct
ttctccactgtactgctaggcatgatatacttccaaagttctgaagacccggttcatgct
ggctcaagcaaaagtcactcggcatccgaagaagcctctggctctgactctgcaagccag
tctgagagcgagcagggcagcgagcagggcagcgagtctaacagcagctccgagtcctct
gaaagtcagtctgaatctgaaagtgaatcaacgggttcgaaatcccagcagacccctcct
gaaaccaaagaaaaaccagcctctaagaaggaaaggatagcagatgttaaaaagatgtgg
gaagaatatcctgatgtttatggggttaggaggtcaaaccgaagcagacaagaaccgtca
cgatttaatataaaagatgaggcaagtagcgaatctgaaaatgagagcccaaaaagaaga
ggccagaagcaagtgaaaagaaaaaaaaagtggaaaagagagatttctggtgaagaagag
gatgaagatggaggggatcaaggcaccagtgcagagagcgaacctgaaccgaagagaatt
aaagcaaaaagacctgtccaaaggagaacaatggccaaaaccaatgttaaaaagcctccc
aaactccagcgtgggaagaagagaaagagacaggtgtcatctgaagatgacgacgatgat
gaagatggtgaaactcctaagagacaaactcgacgaagagcagccaaaaatgtcagttac
aaggaagacgacgattttgagacggattctgatgacctgatagagatgactggggaaggg
gctgatgaacacgaagacaacagtgaaactattgaaaaagtcttggacatcaggcttgga
aaaaaaggagccactggtgcttccaccacagtgtatgcaactgaagctaatggcaaccct
agtgctgactttgaccctgaaaaggatgagggagaggttcattacctgatcaaatggaaa
ggctggtcgtacatccacagcacatgggagagcgaggagtccctgcaacagcagaaagtg
aagggcctgaaaaaactagagaacttcaagaaaaaggaggaggagatcaagcaatggctg
gccaaggtatcgcctgaagatgtggaatatttcaactgccaacaggagctggcttcagag
ctgaacaaacagtatcaaatcgtggagagagtaattgctgtgaagaccagcaagtctgcg
acagggcatgctgactttccagcaaacagtcgcaaaacatcctcgaatgaccccgaatac
ctgtgcaagtggatgggactgccctatgcagagtgcagctgggaagatgaagctctgata
agcaagaaatttcagcactgcattgacagcttcaacaaccgtaacaactccaaaacaatt
cctacccgggactgcaaggtactgaagcagagaccaagatttgttgccttgaagaagcag
ccttcttatattggcagtgagaacctggagctgcgagattatcagctggagggcctcaac
tggcttgctcactcgtggtgcaagaacaacagtgtgatcctggctgatgaaatgggcctg
gggaagacgattcagacaatctcattcctgtcgtacctcttccaccagcaccagctgtac
ggtcctttcctggtggtggttcctctgtcgaccctcacctcgtggcagagagagtttgaa
gtgtgggcacctgagatcaacgtggtggtttacatcggtgacctcatgagcaggaacatg
atacgtgaatatgagtggatccactctcagtctaaaaggttgaaattcaatgcacttatc
accacatatgagattctcctcaaagacaaggctgttttgggaagtattagctgggccttt
ctaggcgtggatgaagcccatcgtttgaaaaatgatgactctttgctgtacaaaacattg
attgacttcaagtccaaccacaggctgctgatcactggcactccgcttcaaaattcgctc
aaagagctctggtccctgctgcatttcatcatgcctgagaagtttgagttctgggaggat
tttgaagaagatcatggaaaaggtagagagaatggctaccagagccttcacaaagtcctg
gagccgtttctcttacgcagagtgaagaaggatgtggagaaatctttgccagccaaagtg
gagcagatcctccgtgtggaaatgtctgctttgcagaagcagtattacaagtggattttg
acaagaaactacaaggctctttcaaagggaacaagaggaagcacatctggtttcctaaac
atcgtgatggagttgaagaagtgctgcaaccactgctaccttatcaagcctcctgaggaa
aatgagagagagaatggcattgagaccctgcagtctctgatcaggagcagtggaaagcta
attctcttggacaagctgctgaccaggctgcgggacagaggcaacagagtcctgatcttc
tcccagatggtgaggatgctggacatcttggcagagtacctgactatcaaacactatcct
ttccagcgcttagacggctcaatcaaaggggagatccgaaagcaggcgctggaccacttc
aacgccgacggctctgaggatttctgtttcttactgtcaacacgagctggagggctggga
attaatttggcctctgctgatactgttgttatctttgattcggactggaacccccagaat
gaccttcaggctcaggctcgggctcaccgcatcggacaaaagaagcaggtgaatatttac
cgcctggtcacaaagggtacagttgaggaggagatcattgaaagggccaagaagaaaatg
gtgctggatcatttggtgatccagcgtatggacaccactggacggactgttctggacaac
aactctgggcgatccaattcaaatcctttcaacaaagaagagctgacagctattctgaag
tttggagctgaagatctcttcaaggagcttgaaggagaagagtcagagcctcaggagatg
gacattgatgaaattctgcgcttggctgaaacacgagagaatgaagtgtccaccagtgcc
actgatgagctgctgtcacagttcaaggtggctaactttgcaaccatggaggaggaagag
acagagctggatgagaggccccagaaggactgggacgatatcattcccgaggagcagagg
aaaaaagtggaggaggaagaaaggcagaaagaactggaggaaatctacatgctgcctcgc
atccggagctcaacgaaaaaggctcaaacaaatgatagtgaatcagatgcagagactaag
agaaggcttcagagatcatcggggtcagaaagtgagactgatgataccgatgatgagaag
agaccaaagcgccgtggacgtcctcggagcgttcgaaaggatactgtggaaggatttact
gatgctgaaatccggaggtttatcaaggcttacaagaagtttggactgcctcttgagcgg
ctggagtgcattgccagggatgctgagctggtggataagtctgtggctgatctgaagcgt
ttaggggaactcatccacaacagctgtgtgtcagcaatgcaggagtatgaggagcagctg
aaagaaaacccaggtgaaacagggaaaggacctgggaaaagaagaggtcctaccatcaag
atctctggtgtccaagtgaatgtgaaatccatcatccagcatgaagaggagtttgaaatg
ctgcataaatccatccctgcagacccagaggaaaggaagaagtaccgcctgacgtgccgt
gtcaaagctgcccattttgatgtagactggggagtggaggaagattctcgcttgttagtg
ggaatttacgagcatggttatggaaactgggaactaattaaaacagatccggaattgaag
ttatctgataagatcctacctgttgagacagataagaaacctcagggaaaacagctccag
acccgagtggattatctactgaaactgctgaagaaggatctggagaagaaagaaaacatg
aaagatggggaagagggcaagctaaagaagaggaaaccacgaataaagaaagagaacaag
gctcccaaagtcaaagatgagcatgggaacgaactctcccctcctcggcactcagacaac
cagtcagaagaaggtgaagtcaaggatgatggcttggacaagagcccagtgaaaaagaaa
cagaagaagaaagagaacaaagagaacaaggaaaaacagacaagcactaagaaagaaaag
gaaagtgataaagagaaaaagaagacaaaagaaaagaaagagaagcctaaaggtggtgaa
gccaaatctggaagtaaagggaagagatcgcaaggtcccgtccacattacagcggggagt
gaaccagtccctattggagaggatgaggatgatgatctggaccaagaaacattcagcata
tgcaaggaaaggatgagaccagtgaaaaaagcactgaaacaacttgataagcctgataag
ggactgacggttcaggaacagctggagcacacacgcaactgcctcctaaaaattggggac
cgcatctctgagtgccttaaagcctacaccgaccaggatcttatcaagctatggagaagg
aacctatggatatttgtgtcaaagttcacagaatttgatgccagaaaactgcacaaactc
tacaagatggctcataagaaaaggtcgcaggaagaggaggagcagaaaaagaaggaggac
atggccagcatgcccagcgtgaagaagccgttccgcccagagccttcgggctccagccgc
gatcctgccatggcccagtctcacgtgcctcacaatcctcattcccagaagctccacatg
cccccttcccacgcccagcagcaaatgcacgggcacccacgtgaaagctacggccatccc
cccaagagacacttcagcaacacagaccgaggagagtggcaacgagatcgaaagttcagc
tacagtggcaacagcaaccagatgtggggcggggagcggcatcaccaatacgagcagcac
tggtacaaggaccaccactatggggaccggcgatctcgtggagagccgcaccgcagctct
gggaactacagaccaaataacctctcccgcaagaggccgtacgaacagtacagcagtgac
cgagaccacagaggccaccgggattactacgacaggcaccaccacgactccaagcgccga
cgatccgacgagttcaggcctcagaattaccaccagcaggatttccgacggatgtctgat
cacaggccgcccatggggtaccatggccaaggaccttcggaccactaccggtccttccac
acagacaaaccgggagactacaaacagccccttcctccacctcacccttccgtgtcggac
cctcgctcgcccccctctcagaaatctcctcatgattccaagtcgcctctcgatcacagg
tcgcctctggataggtcgctagaacagaaaaacaatccagactataactggaacattagg
aaaacgtaa
DBGET
integrated database retrieval system
