Tympanuchus pallidicinctus (lesser prairie-chicken): 128075521
Help
Entry
128075521 CDS
T08967
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128075521 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128075521 (MYO5A)
04131 Membrane trafficking [BR:
tpai04131
]
128075521 (MYO5A)
03029 Mitochondrial biogenesis [BR:
tpai03029
]
128075521 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpai04812
]
128075521 (MYO5A)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128075521 (MYO5A)
mRNA cycle factors
P-body specific factors
128075521 (MYO5A)
Membrane trafficking [BR:
tpai04131
]
Others
Actin-binding proteins
Myosins
128075521 (MYO5A)
Mitochondrial biogenesis [BR:
tpai03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128075521 (MYO5A)
Cytoskeleton proteins [BR:
tpai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128075521 (MYO5A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
AAA_16
AAA_22
Myosin_N
NPHP3_N
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
128075521
NCBI-ProteinID:
XP_052528305
LinkDB
All DBs
Position
Unknown
AA seq
1878 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGID
DAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFAARDSDSCTIPPKHDPLTIF
CDLMGVEYEEMAHWLCHRKLATATETYIKPVSKLHAINARDALAKHIYANLFNWIVDHVN
KALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEK
PRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKFKLLPELFQDEEKVIS
PTSATSSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
SDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW
LMRKKYMRMRKAAITIQRYVRGYQARCYAKFLRRTRAAIIIQKFQRMYVVRKRYQCMRDA
TIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYRRTLKAIVYLQCCYRRMM
AKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTE
TEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELQQTQTEKKTIEEWADKYKHET
EQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKDEMNLMVSIPKPGHKRTDSTHSSNESEYTFSSEITEAEDLPLRM
EQEPSEKKAPLDMSLFLKLQKRVTELEQEKQSLQDELDRKEEQALRAKAKEEERPPIRGA
ELEYESLKRQELESENKKLKNELNELQKALTETRSPEVTAPGAPAYRVLLDQLTSVSEEL
EVRKEEVLILRSQLVSQKGAIQPKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRQS
PQDYHMLNEDGELWLVYEGLKQANRLLESQLQSQKKSHENELESLRGEIQSLKEENNRQQ
QLLAQNLQLPPEARIEASLQHEITRLTNENLFYEELYADDPKKYQSYRISLYKRMIDLME
QLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGML
EYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTI
NGIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQNEHCLTNFDLAE
YRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEG
TYTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLLRKDMCSWSKGM
QIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNALTTA
QIVKVLNLYTPVNEFEERVLVSFIRTIQLRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLA
LETIQIPASLGLGFISRV
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccgagctgtacaccaagtatgccagggtttggattcctgacccagaggag
gtctggaagtcagcagaacttctgaaagattataaacctggagataaagttcttcagctt
cgacttgaagagggcaaggacctagaatattgcctcgatccgaagactaaggaactcccc
ccactgcgaaaccctgacatccttgttggagaaaatgacctcactgcactcagttatctc
catgaacccgctgttctacacaacctcaaagttcgatttatagactctaaactcatttat
acctattgtggtatcgtcttagtggccatcaacccttatgaacagctgcctatctatggc
gaggatatcatcaatgcatacagtggccaaaacatgggggatatggatccacatatcttt
gcagtggcagaagaggcatacaagcagatggccagagatgagcgaaatcagtcaatcatt
gtgagtggagagtctggggcaggaaagacagtttctgccaagtatgccatgaggtacttc
gccacggtcagtggatctgccagtgaagccaatgttgaggagaaagtcttggcttcaaac
cccataatggagtctattggaaatgccaaaacaaccaggaatgacaacagcagtcgcttt
gggaaatacattgaaattggttttgacaagaggtatcgaatcattggtgctaatatgaga
acttatctcttggagaaatcaagagtggtatttcaggcagaagaggagagaaattaccac
atcttttaccaactctgtgcctctgcagcattacctgaatttaaaactctacgattaggc
aatgcaaattactttcattacacaaagcaaggtggaagccctgtgattgatggcattgat
gatgctaaggaaatggtgaacaccagacaagcctgcactttgctagggattagtgattcc
taccagatgggaatttttcgaatcctcgctggcatccttcacttgggcaatgtggagttt
gcagctcgggattcagacagctgcaccattcctcccaagcatgatcccctcaccatcttc
tgtgacctcatgggtgtggagtatgaagagatggctcactggctttgccataggaagctt
gcaactgccactgaaacctacatcaagccagtttctaaactccatgccatcaatgccaga
gatgcacttgccaaacatatctatgctaatctctttaactggattgtagatcacgtgaac
aaagcccttcattctaccgtaaagcaacattctttcattggagtgttggacatctatgga
tttgagacatttgaaatcaacagctttgaacagttctgtatcaactatgccaacgaaaaa
ctgcagcagcagttcaatatgcacgtgtttaagctggaacaagaagaatacatgaaagaa
caaataccatggaccctgattgatttctatgacaatcagccttgcatcaacctcatagaa
gccaaaatgggagttctggatctgttagatgaggaatgcaagatgccaaaaggctcggat
gacacgtgggcccaaaaactgtacaatactcatttgaataaatgtgccctctttgaaaaa
ccacgtttatccaataaggcttttatcatcaaacactttgctgacaaggtggaatatcag
tgtgaaggctttctggaaaagaacaaggacacagtttatgaagaacaaattaaggtccta
aaatcaagtaagtttaagctgctgccagagttattccaggatgaggaaaaggtcatcagt
cccacatcagccacctcttcaggccgtgtgccgttatctcgaactcctgtaaaaccagcc
aaggccaggccaggtcaaactagcaaggagcataagaaaactgtgggacatcagtttcga
aactctcttcatctgctgatggaaaccctgaacgctacaactccacactatgtgcgctgt
attaagcctaacgacttcaagtttccattcacatttgacgaaaagcgagcagtgcagcag
ctgagagcttgcggtgtcctggagaccatccgaatcagtgcagctggtttcccctccagg
tggacataccaagagttcttcagccgttaccgtgttctgatgaagcagaaagatgtcctg
agtgaccgaaagcagacatgtaaaaatgtcctggagaagctgattctggacaaggataag
taccagtttggtaagacaaaaatatttttccgggctggtcaagtagcctatcttgaaaaa
ataagggcagataagttgagagctgcctgtatccgcatccaaaagacaatccggggctgg
ctgatgagaaagaagtacatgcgtatgaggaaggctgccatcaccattcagagatatgtc
agagggtaccaggcacgatgctatgccaagttcctgcgcagaacacgggctgccatcatt
attcagaagttccagcgcatgtatgtggtccgcaaaagataccagtgcatgcgagatgct
actattgctctgcaggctctcttaagaggttacctggtcagaaacaagtaccagatgatg
cttcgagagcacaagtctattattattcagaaacatgtaagaggctggctggctcgagtg
cactaccgcaggaccttgaaggcaattgtttacttgcaatgctgttaccggcgcatgatg
gccaagagggagctgaagaaactgaagatagaggctcggtctgtggaacgctacaagaag
cttcacattggcttggagaacaagatcatgcagctgcagcggaaaattgatgaacagaac
aaagagtacaaatctctgctggagaagatgaataacctggagatcacatacagcacagag
acagagaagcttcggagtgatgtggagaggcttcgtatgagtgaggaggaagctaagaat
gcaaccaatcgtgttctcagcctccaggaggagattgccaagctgcggaaggagctgcaa
cagactcagactgagaagaagacaattgaggaatgggcagacaaatacaaacatgaaact
gagcagctggtatcagaactgaaagagcagaacacattactgaaaacagaaaaggaggag
ctgaaccgccgcatccatgaccaagcaaaggagataacagagaccatggagaagaagctg
gtggaggaaacgaagcagttggagctggacctgaatgatgaacggttacggtatcagaac
ctgctgaatgagttcagccgcttggaggagcggtacgatgacctcaaggatgaaatgaac
ttaatggtgagcatccccaagcctggacacaaaagaacggattcaactcacagtagcaat
gaatctgaatatacttttagctctgagatcacagaagcagaagacttaccactgaggatg
gagcaggagccaagtgagaaaaaggcaccattggacatgtctctgttcctcaagctgcag
aaacgggttacggagctggagcaagaaaagcaatccctgcaggatgaactggacagaaag
gaggaacaggctcttcgtgccaaagctaaggaggaggaaaggcctccaataagaggtgca
gagttggagtatgaatcgctcaagcgtcaagagcttgaatctgagaataaaaaactgaag
aacgagttgaacgagctgcagaaggccctcacagaaacacgatctccagaggtaactgct
cctggtgctccagcatacagagttctcctggatcagctgacttcagtaagcgaagaactg
gaagtacgcaaggaagaagtgcttatcctgaggtctcagttggttagccagaaaggagct
attcaacccaagaataccatgacagattctacaatcctcttggaggatgtacagaagatg
aaagacaaaggggaaatagcacaggcatatattggactgaaggaaacaaacaggcaatct
ccccaggactatcatatgctgaatgaggacggagaactttggctggtttatgaagggtta
aaacaagccaacaggctgctggagtctcagctgcagtcacagaagaagagccacgagaat
gagctggagtcactgcgaggtgagatccaaagtctgaaggaagaaaacaatcgccagcag
cagctcttggcgcagaatctgcagctgcccccagaggcccgcattgaagccagtctgcag
catgagatcacccggctgacaaatgagaatttgttttatgaggagttgtatgcagatgat
cccaagaagtatcaatcgtaccggatttccctttacaaacggatgattgatttgatggaa
caacttgaaaaacaagacaaaactgttcgcaaattaaagaagcaattgaaagtatttgct
aagaagattggtgaacttgaagttggtcagatggagaacatatcacctggacaaatcatt
gatgaacctattcgtccagttaacattccacggaaggaaaaagacttccaggggatgtta
gaatataagaaggaggatgaacaaaaactagtcaagaatcttatcttagagctgaaacca
cgtggggtagcagtcaacctgattccaggactaccagcatatattttgttcatgtgtgta
cgccatgcagattaccttaacgatgaccagaaagtgcgttcattgttgacttccactatc
aatggcatcaaaaaagtgctgaagaaaagaggtgatgactttgaaacggtgtctttctgg
ctgtccaacacctgccggttcttgcactgtttgaagcagtacagtggagaagaggggttt
atgaagcataatacacctcgtcagaatgagcactgcctcactaattttgacttagctgaa
tacagacaagtcctgagtgacttggctattcagatctaccaacaactggtccgtgtgttg
gagaacattctgcaaccaatgattgtttctggaatgctggagcatgagaccatccaaggt
gtctcaggggtgaaaccgacagggctgcggaagagaacatccagcattgctgatgaagga
acctacactttggactccattattcgacagctgaactctttccattccgtgatgtgtcag
catggaatggatccagagctgatcaaacaggttgtcaagcagatgttctacatcatcgga
gctgtaacactgaataatcttctcctgcgcaaggacatgtgttcttggagcaaaggaatg
cagataaggtacaatgtgagtcaacttgaagaatggctacgtgataaaaatttgatgaac
agtggggccaaagaaacactggagcccctcatacaggctgcacagttgttgcaagtgaaa
aagaaaacagatgaagatgcagaagccatttgttcaatgtgcaatgcactgactactgcc
caaattgtgaaagtactgaatctgtatactccagtgaatgaatttgaagagagagtcttg
gtatcatttatacgtacaatacagctgcgtctgagagacaggaaggactctcctcaactg
ctcatggatgctaaacacatctttcctgttacttttccatttaatccatcctccctggca
ttagaaaccatccagatcccagccagtttggggctgggcttcatatcgcgtgtctga
DBGET
integrated database retrieval system
