Tympanuchus pallidicinctus (lesser prairie-chicken): 128075522
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Entry
128075522 CDS
T08967
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128075522 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128075522 (MYO5C)
04131 Membrane trafficking [BR:
tpai04131
]
128075522 (MYO5C)
03029 Mitochondrial biogenesis [BR:
tpai03029
]
128075522 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpai04812
]
128075522 (MYO5C)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128075522 (MYO5C)
mRNA cycle factors
P-body specific factors
128075522 (MYO5C)
Membrane trafficking [BR:
tpai04131
]
Others
Actin-binding proteins
Myosins
128075522 (MYO5C)
Mitochondrial biogenesis [BR:
tpai03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128075522 (MYO5C)
Cytoskeleton proteins [BR:
tpai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128075522 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
128075522
NCBI-ProteinID:
XP_052528315
LinkDB
All DBs
Position
Unknown
AA seq
1737 aa
AA seq
DB search
MALAELYTQYNRVWIPDSEEVWQSAEITKDYKAGDRFLHVQLEDGTELHYPVDPSALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNSKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDPSYRIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEFKHLKLGSAEEFNYTRMGGSTTIEGVDDR
ANMIETQKTFALLGLKEDFQMDVFKTLAAILHLGNLEITAVGDERSSVNLEDNHLNVFCE
LLELNSDKMAQWLCHRKIITTSETVIKPMTKPQALNARDALAKKIYSHLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNTLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYEVLMEILKESKFHLCASFFQDNPAPISPF
SSTISIKSARPVLKSPNKQLRMTVGSKFRSSLSLLMETLNATTPHYVRCIKPNDEKQPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMAQQELSFNDKKQICKIV
LQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACIVIQKSVRGWLQRRRFLRMK
QAAVTIQQYCRGQRAVRQAITAQALKQTWAAIIIQKYCRGYLVRKLCQLIQVAAVTIQAY
TRGFLARKKYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQRLQKKIEE
QSKENHGLLERLTNLASTHMNDLDTIQKLESELEKLAAQKRTYEEKGKKYKEDSEQKILK
LESQIKELREQKETLEVKLQEKTEEMKEKMDDLTKQLFDDVRKEESQRMILEKNFQSQKQ
DYEKEIESLKGEIKVLREEKTQLQQQMQQEIAIQDDLKIEVGQLTKQVQKIPELQKEIEL
LQTQKLDVEKQAQSQKREMREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKENYEKEIEGLNLKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVSELENQKLDLENRLQEQTAKLKEMSNRLHHEPEGDRTLRRTN
EIQNEMDVKEKGRLNVITQEMEGLSNGLKQDEIQAEVKSKMKQETTRLTVENMDLEEELD
MKDRIIKKLEDQIKTLTKTIEKGNEVSVSALSKEYIGMMEYKREDEERIVQNLILDLKPR
GVVVNMIPGLPAHILFMCVRYADYLNDADMLKSFINVTIDGIKQAVKENSEDFEMLSFWL
SNTYYFLNCLKQYSGEEEFMKYNTPRQNKNCLKHFDLSEYRQVLSDLAIRIYHQFILVME
NNIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQN
GLDSELLKQAVKQLFFLIGAITLNSLLLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSS
NAKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTP
SFVRKVQAMLNNREDGPQLMLDTKYHFQVTFPFTPSPHDLEMIQVPSSFKLGFLTRV
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctgtacacacagtacaacagggtttggattcccgatagcgaagaa
gtctggcagtctgcagaaatcacaaaagactacaaagcaggagaccgttttctccatgtg
caattagaagatggaactgagctccattaccctgttgatccatctgctttgccacctctg
agaaatcctgacatccttgttggtgaaaacgacctgacagcactcagctacctccacgaa
cctgctgttctgcacaatcttaaagtccgtttcgtggagtctcggctcatctacacctac
agtggaataattttggttgcaataaatccctacaagcagttgccaatatatggagatgct
attatccatgcgtatagtgggcaaaacatgggggacatggatcctcatatatttgctgtg
gcagaagaggcatacaagcaaatggcaagaaatagcaagaatcaatctattatagtcagt
ggagaatcgggagctggaaagactgtgtctgcaagatacactatgaggtactttgccacc
gtgagtaagtcaagcagcaatgcacatgtggaggataaagttttggcatccaatccgata
actgaggctgttggcaatgcaaaaaccacacggaatgataacagcagtcggtttggaaaa
tacactgaaatcagttttgatccaagttaccgaatcattggagccaacatgaggacgtac
ctgctggagaaatccagagttgtcttccagtcagagaatgagagaaattaccatatattt
tatcagctctgcgcatctgctatgcaacctgaattcaagcatcttaaattgggaagcgca
gaagaatttaactacacgagaatgggtggcagtacaactattgaaggagttgatgacaga
gcaaatatgattgagactcagaagacatttgccttactgggtctgaaagaggattttcag
atggatgtttttaagacgctggcagcaatcctgcacttgggcaacttggaaataacagca
gttggagatgagaggtcatctgtcaatctggaagacaatcatctcaatgtattctgtgag
cttctggaattaaacagtgacaaaatggcacagtggttgtgccaccgaaagattatcact
acttcagagactgtaataaagccaatgacaaaacctcaggctcttaatgcaagggatgct
ttggcaaagaagatctactctcatttgtttgactttattgtggaaagaattaatcaagct
ttgcagttctctggcaagcaacatactttcattggtgttctggatatttatggctttgaa
acatttgatgtgaacagttttgaacaattttgcatcaattatgccaatgaaaaactacag
cagcagtttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccgtggactttaatagatttctatgacaaccaacctgtcattgaccttattgaagctaaa
atgggaattttagagcttttggatgaagagtgcttgttgccccatggaacagatgagaac
tggcttcaaaagctatataataattttgtcaacaaaaacacgctctttgaaaagccgagg
atgtcaaacacgtctttcatcattcaacactttgctgataaggtagaatataagtgtgaa
ggatttctggaaaaaaacagggatacggtgtatgaagttttgatggaaattttgaaagag
agcaagtttcatctgtgtgcaagcttttttcaagacaatccagcacccatttcacctttc
agttcaactataagcatcaaatctgcaagacctgtcctcaagtcacccaacaagcagctc
cggatgacagttggcagtaagtttcggagttctttgtctctactcatggagacccttaac
gcaaccacccctcactacgtgcgatgcataaagccgaacgatgagaagcagccttttgag
tttgactcaaaaagggtggctcagcagctgcgagcatgtggtgttttggaaaccattcga
attagtgcacagagctatccgtccagatggacttacattgagtttttcagccgctacagc
atccttatggcacagcaggagctctctttcaatgataagaaacagatctgcaagattgtt
ctgcagcggcttatccaggatcctaaccagtatcagtttgggagaacgaaaattttcttc
agagcaggacaagttgcttacttagagaaactgcgctcagacaaactgagacacgcctgc
atcgtgatccagaagagcgttcggggctggctgcagcgccgcaggttcctgcgcatgaag
caggcggccgtcaccatccagcagtactgccgtgggcagcgcgccgtgcggcaagccata
actgcacaagctctgaagcaaacatgggcagctataattattcagaaatactgccgaggt
tacctcgtccgtaagctttgccagctcatccaggtggctgctgtaacaatccaggcttat
accagaggatttctagcaaggaagaaataccggaagatgcttgaagaacacaaggctgtg
atccttcagaaatacgcccgtgcgtggctcgccaggcgcaggtttcagaacatccggcgg
tttgtgctgaacatccagctttcgtacagagttcagcggctgcagaagaagatagaagaa
cagagcaaagaaaatcatggcttgctggaacgattgactaacctggcttcaactcacatg
aatgacttggatacaattcagaaacttgaatcagagcttgaaaagttagctgctcaaaag
agaacttacgaggagaaagggaaaaaatataaagaggacagtgaacagaaaatattgaaa
cttgagagtcagattaaagagttacgagaacagaaggagactttagaagtaaagctgcaa
gagaaaacagaggaaatgaaagagaaaatggatgacctcacgaagcaacttttcgatgat
gtacgaaaagaagaaagtcagagaatgatacttgagaaaaatttccaaagtcagaaacaa
gactatgaaaaggaaattgaatcgctcaagggagaaataaaggttctcagagaagaaaaa
acacagctacagcaacaaatgcagcaagagattgccattcaggatgacctgaaaatagaa
gtaggacaacttacaaaacaagtgcagaaaatacctgagttgcaaaaggaaattgaactg
ctgcagacgcaaaaactggatgttgaaaaacaggcccaatcacagaagagagagatgagg
gaaaagatgtcagaagttacaaaacagcttcttgaaagctacgattttgaagatgtcaga
agcaggctgtctacagaggatttggaacacttaaatgaagatggagaattgtggtttgct
tatgaaggcttgaaaaaagctacaagagtgttggaaagtcacttccaatctcagaaggaa
aactatgaaaaggagattgaaggtttgaacttgaaagttgaacatcttagccaagatatt
aatcacctacaaaaactatttcgagaggaaaatgacataaatgatggaattcggcttgaa
gttagcaggctaacttcagaaaacctggtgatcccagatcttaaacagcaagtttctgag
cttgagaaccaaaaattagaccttgaaaatcgtcttcaagagcagactgcaaagttgaaa
gagatgtctaaccggctgcatcatgagccagaaggggacagaacactaagacgaacaaat
gagatccagaatgaaatggacgtaaaagaaaaaggaaggttgaatgtcataacccaagaa
atggaggggctgagcaatggtttgaagcaagatgaaatccaggctgaagtaaaaagcaag
atgaagcaagaaacaactcggcttactgtggagaacatggaccttgaagaagaactagac
atgaaagatagaataataaagaaattggaggatcagatcaaaactcttaccaagactatt
gaaaaaggcaatgaagtttctgtgtcagctttgtccaaagagtacattggaatgatggag
tacaaaagagaggatgaagaaaggattgttcaaaatctgatcctcgatttaaagccacgt
ggagttgttgtcaatatgatacctggccttccagctcacatcctattcatgtgtgtgagg
tatgcagattatctgaatgatgctgacatgctgaaatctttcataaatgtaaccattgat
ggtataaaacaggctgttaaggaaaattcagaagattttgagatgttgtctttttggctt
tccaatacatactattttcttaactgcttgaagcaatacagtggggaagaggaatttatg
aaatacaatacccctcgtcagaataagaactgcctgaagcattttgatctctcggagtac
agacaagttctcagtgatttggccattcggatctatcaccaattcattcttgtaatggag
aataacattcagcacatgatcgtaccaggtatgctggaatacgaaagtctccagggaatt
tctggcttgaaacctacagggttccgtaaacgttcctctagcattgatgacacggatacc
tacacaatgacatctattctgcagcaactcagctacttttatagtacgatgtgccagaat
ggcctggactctgagcttctcaagcaggcggtgaagcagcttttctttctcattggagcg
atcaccctcaatagtctcctcctccgcaaggacatgtgctcttgtaggaaaggaatgcag
ataagatgcaatatcagctatttggaagaatggcttaaagacaagaatcttcaaagcagc
aatgccaaagaaactttagagcctctgtctcaagcagcctggctccttcaggtcaaaaag
atcactgatgatgatgccaaagaaatatgtgaacactgcacatcgctttccactgtgcag
atagttaagatcctcaactcatacactccgatagatgattttgagaaaagagtgactccg
tcgtttgttcgcaaagtccaggctatgctaaacaatcgggaggatggaccgcagctgatg
cttgataccaaataccactttcaagtgacgtttcctttcacaccctctccacatgattta
gaaatgatacaagtccccagcagcttcaaacttggctttctcacaagggtttag
DBGET
integrated database retrieval system
