Tympanuchus pallidicinctus (lesser prairie-chicken): 128075541
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Entry
128075541 CDS
T08967
Symbol
TP53BP1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128075541 (TP53BP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
BRCT
DUF4537
RTT107_BRCT_5
SH3_Hsr9
Tudor_2
Motif
Other DBs
NCBI-GeneID:
128075541
NCBI-ProteinID:
XP_052528342
LinkDB
All DBs
Position
Unknown
AA seq
1897 aa
AA seq
DB search
MEPVGSPLDPGLSQQGTPRLIVEDSQPEGAGPERDAERARLGALARRLPLRRSPVLEIVR
GAARERPAAESGARGRADGAVLAGPMESAAEETPPPGPDSSARGKAAGRCEADDEDCPAS
PYVEDTGTSQLQFGALELSQSQDLESDVTSDEDVRNQLHSGAAVFSSSRTVKNDVKDELN
VKSRETVTSIETHSALEGHLKDFKGTPLGAEEHCREAMPVSDSPKTGQCAEPGHEESGVL
STQEEMFPENDVTVAAGSDCLVTRVEEGSSLACTPARSLHLLQLSGQGSLVQESCSTGSP
DVVVPSPVGLASNALIPGSPTEQDQSEDEHVDVSTAAEGGELVQKGQKEKRLMQEEQKRD
ELVEMVIPPGPPVLPQASTPVSQTAPAFFPESLPIPSQPVFSHDIFVPTQSPEKNEGEEK
AAVSTYSCIPGDLSGPADTLSKMPVEDSVSQPSESCNLMLSASGCSQPTNTQISSDSLKT
GHDNEATQIQVTSECSISDLRLSSVANDSGKTRLDAGHEALSENCEKPKQEDIRTAGKPV
MQLGSTETAGDETLDPTAHQAHGCISGSQAAADQSCPEISSCCDRREAQLKDYSLRDSSP
YEAVPETQPEEQEERMHIAEKQMNEDDSLVNTIVSQRFLLEGKAEHHEEMEVEFAGGSCE
NSKKMSVETQGLGKIRLECCQKETLKDGTFGTGEAKNVDKLSSKAASESMPKLNEVLSKP
SVGELLEQHSLFPKLKIDIPSEMALCAKSHAQSSELHQIMEAQPQQQEREADMLVTQQET
QVPKNTVITAMTVNLEQEEQMQPEEQTAKSPSPSNGTPFHFTLPKEGDTIQPLTSVTPPL
TGQLKMGPRRHSTPIVDDNCPDSTIATSDVTAEGTMGTNSVTVESAVVSADVSEVCEKGD
SCAVPEADVKLSLRMNLVTPMNDGSDESLPFSLEKPAASDRKTGSSAAASSQKASSVFSR
VCEVRREEKARDHSLSASPLRGNPLGFPGMEKNAEIRENPSDQQHRADDSGEQLLILQGC
HQQPSCTEQKESVEAGIVTIQIEEGARVQQKPSKVVAVDESQGMQPRDTNNKGIQTTADC
LFTPATVTTATQTAEETYRRVDVGTSMCGQRPGRQDVNIQTEEGGQKLVNTPAEDTDSLH
SQGEDEFNLHPPRGQVQRRHVRTVREVRTVVTRVITDVYYINGAEVERKVVEETEEPVVE
CQECETDTSSSRTTVSSSLTSGDLGDVSSFSSKASSLHRTSSGTSSSLSATHSSSSARGT
GAVKGKVCGTESGEFALPIGRGVLGKLSPRKGVGQPVSPLRVSQAGAALLCEEEEDSMLG
PRQGGKAPVTPRGRGRRGRPPSRTTGTRDLAGIPVLEDLSTTGSPEEKSFVRTTRLPDGG
EKSDTSGFCALRRSDSPEIPLQVVAGPSDCADSSAGSSFVGLRVVAKWSSNGYFYSGTIT
QDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLETEVTALSEDEYFSAGVVKGHRKESGE
LYYCIEKEGQRKWYKRMAVILSLEQGNKLREQFGLGPYEPVTPLTKAADISLDNLVEGKR
KRRSNLVSPSSSSSSTTPTRKGMESPRVPPGVLSGKRKLVASEEEKSPAKRGRKSATVKP
GAVKTGEFVSTCEGIDPPLLEDHHGPLPHNKTLFLGYAFLLTMATPSDKLANCLKPSDGP
AGSSEEEEEFLEMTPYNKHYIAQQLRAGAGYILEDFNETQCNAAYQCLLIADQHCRTRKY
LLCLARGIPCVSHVWVYDSCHANQLQNYRNYLLPAGYSLQEQKLLEWHPRENPFHNLKVL
LVSDQQQNFLDLWSEILMTGGASSVKQHFSNANNKDIALGVYDVVVTDLSCPAVVLKCAE
ALRLPVVSQEWVIQSLIAGERVGYNKHPKYKHDYVPH
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgtcggcagcccgctggaccccgggctctcgcagcagggaacgccgcgtctg
atcgtggaggactcgcagcccgagggcgccggcccggagcgggacgcagagcgggcccgc
cttggcgcgctggctcgccggctgccgctgcggcggagccccgtgctggagatcgtccgc
ggggcggcccgggagcggcccgcagctgagagcggagcgcgcggccgcgctgacggcgcg
gtgctcgcggggccgatggagagcgccgccgaggagacgccgccgcccggcccggacagc
agtgcccgcgggaaggccgcaggaagatgcgaagcggatgatgaggactgtcctgcctcg
ccgtacgtggaagatacaggaacatcgcagctgcagtttggagctctggagctctcgcag
agccaggacctggagagtgatgtcacatccgatgaagatgttaggaatcagcttcactct
ggagctgctgtcttttcttcttccagaactgtgaagaatgatgttaaggatgaactgaat
gtgaaaagcagggaaactgtcaccagcatagaaacacattctgctttggagggccatctg
aaggattttaaaggaacaccgctgggtgcagaagagcactgcagggaagcgatgcctgtc
tctgattcgcctaaaactgggcaatgcgctgagccgggccacgaggagtcgggtgtcttg
tcgactcaggaagagatgtttcctgagaatgatgtgacagttgctgcagggagtgactgt
cttgtaaccagagtggaagagggaagttctctggcatgtacccctgcccgcagtctgcac
ctcctgcagctctctggacagggatcccttgtgcaggagagctgttccactggctctcca
gatgtagttgttccttctcctgttggcctagcatccaatgctctcatccctggcagtcct
actgaacaggaccaatcagaagatgaacatgtggatgtctctaccgctgctgaaggagga
gagctggtgcagaagggacagaaggaaaagagactgatgcaggaggagcagaagagagat
gagctagtggagatggttattccaccaggacctcctgttttgccacaggcttcaactcca
gtgtcccagactgccccagccttctttcctgaatctttacctataccatcacaaccagtg
ttctctcatgatatttttgttccaactcagagtccagagaagaatgagggagaagaaaaa
gctgctgtttcaacctattcatgtataccaggagacctttctggacccgcagatactttg
tcaaagatgcctgtggaagactctgtgtcacagccttccgagtcctgcaatctgatgctt
tctgcaagtggatgcagccagcccacaaacacacaaatcagttcagactctctgaaaact
ggccatgataatgaagctacacagatccaggtaacttctgaatgtagcatttcagacttg
agactctcttctgtggcgaatgacagcggaaaaacgaggctggatgccggacatgaagcc
ctctctgagaactgtgaaaaaccaaaacaggaggatatacgtactgcaggaaagcctgta
atgcagttaggtagtacagaaacagcaggagatgagacgttagaccctacagcccatcag
gctcatgggtgtatttctggaagtcaggctgctgcagatcagtcttgccctgagatttca
tcctgctgtgacagaagagaagctcagttaaaggattattcactgagagacagttctcca
tatgaggcagttcctgagactcagcctgaagaacaggaggagaggatgcatatagcagag
aagcaaatgaatgaagacgactctcttgttaacacgattgtctctcagaggttccttctt
gaagggaaggcagagcaccacgaagagatggaagtagaatttgctggtggttcttgtgaa
aatagcaaaaaaatgtctgttgagactcaaggacttggaaagattagactagaatgctgc
caaaaagaaactttaaaagatggtacttttggcactggagaagcaaagaatgtggataaa
ctgtcctctaaagctgcttcagaaagcatgccaaagctgaatgaagttttatctaagcct
tctgtaggggagttattagaacagcacagtttgtttcctaaattgaagattgacattcca
tctgagatggcattgtgtgccaaaagccatgcacaaagttcagaattacatcagataatg
gaggctcaaccacaacagcaagagagggaagctgacatgctggtgactcagcaggagact
caggtgccaaagaatacagtgattactgctatgacagtgaatctggagcaagaagagcag
atgcagccagaggagcagacagctaagtcccccagtccttccaatggaacaccatttcat
ttcactttgccaaaggagggtgataccattcaaccgctgaccagtgtaacaccacctctc
actggccaacttaaaatgggacctagaagacacagcacaccaattgtggatgataattgt
ccagacagcacgatagcaactagtgacgttacagcagagggcacaatggggaccaacagt
gtcactgtggaaagtgcagtggtgtcagcagacgtgtcagaagtgtgtgaaaaaggagat
tcttgtgcagttcctgaggctgatgtaaaactctctctacgaatgaaccttgttactccc
atgaatgatgggagcgacgagtccctaccattcagcttggaaaagcccgcagccagtgat
aggaaaactggatcctctgctgctgccagctctcagaaagcatcatctgtatttagtcgt
gtctgtgaagttcggcgagaggagaaggctagagaccacagcctttcagcttccccactt
aggggaaatccactcggctttcctggcatggaaaagaatgctgaaatacgtgaaaatcct
agtgatcagcaacacagagcagatgacagtggtgaacagctcctaatacttcagggctgc
catcaacaaccttcttgtacagagcagaaagagtcggtggaggctggtattgtaacaatt
cagatagaagaaggggcaagagtgcagcagaaaccaagtaaggtggttgcagttgatgaa
agccaagggatgcagccaagggataccaataataaaggaattcaaactacagcagactgt
ctgtttacccctgcaactgttacaacagcaacgcaaacagcagaagaaacttataggcga
gtggatgtgggaaccagtatgtgtgggcaaagacctgggcgacaagatgtaaacatccaa
actgaggagggtggacaaaagcttgtgaatacccctgcagaggacacagactctctacac
agtcagggagaggatgaatttaacctccatcctcccagaggccaggttcagcgtcgccat
gtgcgaactgttcgagaggtgcgcactgtggttacccgtgttataacagatgtttactac
ataaatggtgcagaggtggaacggaaggtagttgaggaaactgaggagcctgtagtggag
tgccaggagtgtgagactgacacatcctcctctagaactacagttagctcatcgctgact
tcaggggaccttggtgatgtcagctccttttcttcgaaggcctcaagcctccaccgcaca
tccagtggaacaagcagcagtctctctgccacacacagcagcagttcagcacgaggcact
ggagctgtcaaagggaaagtgtgtggtacagaaagtggagagtttgctttacccattggc
agaggtgtcttagggaaactaagccctaggaaaggagttggtcaaccagtatctcctctc
agagttagtcaggcaggagcagcacttctgtgtgaggaagaggaggactctatgcttggt
cctcgccagggtggcaaagcacctgtgacacctcgtgggcgaggaagaagaggccgccca
ccgtcccgaacaactggaacaagagatttggctgggattcctgttttggaggatctctca
actacaggatcacctgaggagaaatcatttgttcgtacaactcgcctaccagatggaggg
gagaagtctgacacatctggcttctgtgccttacgtcgaagtgactctccagaaatccca
ttacaggtggtggctggtccttcagactgtgcagactcatctgctgggagcagctttgtg
ggcctcagggttgtagcaaagtggtcttcaaatgggtacttctattctgggacgattact
caagatgttggagcggggaagtacaaacttctcttcgatgatggatatgaatgcgatgta
ctaggaaaagacattttgctctgtgaccctatcccattggagactgaagtaactgcgctc
tcagaggatgagtacttcagtgcaggtgtagtgaaagggcaccggaaggagtctggagag
ctatattattgcattgaaaaggaaggccagaggaagtggtacaagcgaatggctgtgatc
ctgtctctggaacaaggaaataagctccgagagcagtttggactaggtccttatgaacct
gtcacccccctgactaaggcagctgatatcagtcttgataatctcgtggaggggaagcgg
aagcgacgcagcaaccttgtctctcccagctcctccagtagtagcacaactcccactcgt
aaagggatggaaagtccacgtgtgccaccaggtgtactttctggcaagaggaaacttgtt
gcttctgaggaagagaaatccccagctaaacgtggccgtaagtcagcaacagtaaagcct
ggggctgtgaaaacaggagagtttgtgagtacctgtgaaggcatagatcccccactactg
gaggaccatcatggaccattgccgcacaataagactctctttttgggctatgcctttctt
ctcaccatggcaacacccagtgacaaactggccaattgcctgaagccttcagatggtcct
gcagggagtagtgaggaggaagaagaattcttagagatgactccgtataacaaacattat
atagcacagcagctgcgagcaggagctggctatatcctggaagactttaatgaaacacag
tgcaatgcagcatatcagtgtcttttaattgcggatcagcattgtcgaacacggaagtac
ttgctgtgccttgctcgagggatcccttgcgtgtctcatgtctgggtttacgatagctgt
catgctaaccagcttcagaattaccggaattaccttttgccagctgggtacagcctgcag
gagcaaaaactgctagaatggcacccacgagaaaacccattccataacctgaaggttctc
ctagtatcagatcagcagcagaatttcctggatctgtggtctgaaatccttatgactggt
ggagcatcttctgttaaacagcatttttcaaatgctaacaacaaagatattgcactgggt
gtttatgatgtggtggtgactgatctttcctgcccagctgtcgtcttgaagtgcgcagag
gcattaaggctgcctgttgtctcacaagagtgggtgatccagagccttattgctggagag
agagtaggctacaacaagcatccaaaatacaaacatgactatgtccctcattaa
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