Tympanuchus pallidicinctus (lesser prairie-chicken): 128075561
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Entry
128075561 CDS
T08967
Symbol
SPATA5L1
Name
(RefSeq) ribosome biogenesis protein SPATA5L1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpai03009
]
128075561 (SPATA5L1)
Enzymes [BR:
tpai01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
128075561 (SPATA5L1)
Ribosome biogenesis [BR:
tpai03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
128075561 (SPATA5L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_14
AAA_22
AAA_33
Vps4_C
DUF815
Rad17
AAA_2
AAA_7
TIP49
AAA_lid_PRS2_C
RNA_helicase
ABC_tran
NACHT
TsaE
bpMoxR
NTPase_1
DUF6497
AAA_28
nSTAND3
AAA_3
IstB_IS21
Mg_chelatase
AAA_18
Motif
Other DBs
NCBI-GeneID:
128075561
NCBI-ProteinID:
XP_052528391
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MEPAPLKLLPPDPGDEGTQRCRLGPAALSSLGVRLGAPLRISLPAGCYLCTAWPRPDLAD
GYVQADPACSTGLTAAAPRGLTLSPGCLQPLSSRRLRGAAVRAVLRGGARGRPAGLQEAV
RDLLTHVYVSPRYVVTVGPRVRAPVVHVEILSVDPATEEAGLITPQTDVTITEVMTLERY
RLLTEDPAEIPVAGLDDVRDSLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLL
VKAVAKEVGAYLLCVCGPALYGSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCP
KRRSSSSAPEDRLVAQLLTLLDGAGAGKDRMVVVAATNRPDALDPALRRPGRFDREVIIG
TPTLTQRRSILQMLTCGMPISTDVDLVKLAEMTTGYVGADLTAFCREAAMQAVFHSSLDS
AEVLINMADFQEAFKKIQPSSFRGAVGLKECKPITWEQIGGLEDVKLKLKQSVEWPMKFP
QAFVRMGLARPKGVLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGDSEKILS
QVFHQARANSPAIIFLDEIDSILGSRSRGKTGRGVSERVLSVLLNELDGVGLKVTERRGN
KLQLEGRCEELSDEERQLEFQETLSRDVMVVAATNRPDMLDDALLRPGRLDRVIYIPPPD
LKGRLSILKVCTEKIPLDTDVSLQDIAALTDFFSGADIENLCKEAALLALQENGLEATAV
KQEHFVKSLETVKPSLSMKDLEFYEEFIVKN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggcgcccctcaagcttctacccccggaccccggggacgaaggcacgcagcgg
tgcaggctgggccccgccgccctctcctccctgggggtccggctgggcgctccgttgcgg
atctccctgcccgccggctgctatctgtgcacggcgtggccgcggccggacctggcggac
gggtacgtgcaggcggacccggcctgcagcaccgggctgacggcggcggccccgcgcggg
ctgacgctgagccccggctgcctgcagccgctgtcctctcgccgcctacggggggcggcc
gtgcgcgcggtgctgcggggcggcgcgcgcgggcggcctgcggggctgcaggaggcggtc
cgcgacctgctgacccacgtctacgtttcccctcgctacgtcgtgactgttggccctcgt
gtccgcgctcccgtggtgcacgtggaaattctctccgtagaccccgcgacggaggaagcc
gggctgataaccccccagacggacgtgacgattacggaggtgatgactttagagcggtac
aggctcttaacggaggacccggcagaaattcctgtggcggggctggacgatgtgcgagac
tctctgaaggagatggtcgacctgccgttccgtttcccgaggacgtttaagaagctgggg
ctttccgtccccaacggggtgctgctggtcggccctccgggagtggggaagacgctcctg
gtgaaggcagtggcgaaggaggtgggcgcgtatctgctgtgcgtctgcggccccgcgctg
tacggctccaggccgggggaaagcgaggagaatttgcgaagcgtctttgaaaagggcagg
gagatgtcctgtgagggcccgaccgtgctctttattgatgagatcgatgctttgtgcccg
aaacgacggagctccagcagcgctcctgaggatcgcctggttgctcagttgctgacgctg
ctggacggtgctggtgctggtaaggataggatggtggttgtggcagcgacaaacaggcct
gacgccttggatcctgcgctgagaaggccgggcaggtttgacagagaagttattattggg
acaccgacgcttacgcagaggagatccatcctgcagatgctcacctgtggtatgcccatt
tctacagacgttgatttggttaagctggcagaaatgacaactgggtatgttggagctgac
cttacagcgttctgcagagaagctgctatgcaggctgtgttccacagctctttggattca
gctgaagtgctaattaacatggcagatttccaagaagcttttaaaaaaattcagccatcc
tctttccgaggtgcagttggactcaaagagtgtaaacccatcacttgggagcagattggt
ggtcttgaagatgtgaagttgaagttaaaacagagtgtggagtggcccatgaaatttcct
caggcatttgtgaggatggggctggctcgtccaaagggtgttcttctctatgggccatca
gggtgtgccaaaaccacattggtgaaggctgtggccacaagttgtcactgttcctttctg
tctgtaagtggtgctgagctgttctcaccttatgttggagattcagagaagattttatct
caggttttccaccaagcgagagcaaattccccagcaataatcttcctggatgaaattgat
tctatcctgggatctcgatcgcgcggtaaaactggccgtggtgtctcagagcgggtgctg
tctgtgcttctcaatgagttggatggtgttggactgaaagtcacagaaagaagagggaat
aaactacagcttgaggggagatgtgaggaactaagtgatgaggaaagacagctagagttt
caggaaaccttgagcagagatgtcatggtagttgctgcaacaaataggccagatatgttg
gatgatgccttactgcgccctggaaggttagacagagtgatctatattccacctccagat
ctaaagggaaggctttccattttgaaagtctgcacagagaaaattccattagatactgac
gtgtcactgcaggatatagcagccctaacagacttcttctctggagctgatattgaaaat
ctgtgcaaggaggctgccttgctggcattgcaggagaatggactcgaagcaaccgctgta
aaacaggaacattttgtgaaatcactggagactgtaaagccatctttaagcatgaaagac
ttggaattttatgaagaatttatagtcaagaattaa
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