Tympanuchus pallidicinctus (lesser prairie-chicken): 128075913
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Entry
128075913 CDS
T08967
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128075913 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpai01009
]
128075913 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128075913 (PCDH11X)
Protein phosphatases and associated proteins [BR:
tpai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128075913 (PCDH11X)
Cell adhesion molecules [BR:
tpai04515
]
Cadherins
Protocadherins
128075913 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
Fibulin_C
TMEM154
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
128075913
NCBI-ProteinID:
XP_052529051
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLNPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSIPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKKLFAIDNATGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSSNPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFAIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYIQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEMGRPQTPLKESTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPSSGA
STSHPLPLGFPQEEYYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNTPLPSFGFQQSWGRGARSDGRHTLGRPLPKDDTDKGQELALA
TVPVS
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctttctggaacctacctcttggcagtcttattagcctgtattgtatttcaa
tctggagcacaggagaagaactacacagtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatttgctcaaggatcttaatctaacactgaatccagatgtccccctttcctcgcca
ctacagttcaagcttgtgtataagactggggatgtaccactagtacgagtggaagagaac
actggtgagatatttacaactgcaaaccgcatagaccgagagaagctgtgctctggcatc
tttagtgagaatcgctgcttttatgaggtggaggttgctgttttgcctgatgaagtcttc
agactggtcaagatcagattcctaatagaggatataaatgacaatgcccccctcttccca
tctacagttattaacatctctatccctgaaaacacagcgattaattcccgatattctgtt
ccatctgccattgatccagacattggtgtgaatggtattcagcattatgaactacttaag
cccaaaacagctccgaaaaggacatttggatcaattacaaatgatcagggtcagaatgta
tttggtcttgatataattgagacacctgagggagataagtggcctcaactgattgtccag
cagatcctggatagagagcagaaggatacctatgtgatgaaaattaaagttgaagatggt
ggaagtcctccaagatctagcactgcaatcctgcaagtcacagtgactgatgtgaatgat
aatcgtccagtctttaaagagaatgacattgaagttagtattccagaaaatgctccagtt
ggcacctctgtttctcagctccatgccactgatgcagacctgggctcaaatgcacaaatc
cacttctatttcagcaatcagatctccagcttggccaaaaagctgtttgccattgataat
gccactggtctcatcaccataagagagccactagacagggaagaatctccagtacacaaa
ctaactgttttggcaagtgatggcagttcgactccatcaagagcaacggtgactgttaat
gtcacagatattaatgacaatgtcccatcaattgacacaaggtacatcatcaatccagtg
aatgggacagtgctcttgtctgagaaagctccacttaatacaaaaattgcattgataaca
gtaatggacaaggacgctgatctgaatggaaaagttacttgttttacagatcatgatgtc
ccttttagactaaagccagtgtttgataatcagtttcttctggagacagctacatttcta
gattatgaatccacacgggaatatgctattaaaatagtagcttcagattcaggtaaacct
cccttaaaccaatctgcaatgctcttgatcaaaattaaagatgaaaatgacaatgcccca
gttttcacacagcctatcataggtctttccatccctgaaaacaatgctcctggtactcag
ctaaccaagataagtgctacagatgccgacagtgggcgcaatgctgagatcagctatatt
ctgggttccgatgcaccccctattttcaatcttgaccgccgcacaggcattctgacagca
gtgagaaagctggatagagaaaaacaagacaggtactccttcactgtactggctaaggat
aatgggatgccacccttgcagaccaatgctactgtgacagtgtcagtcctggaccagaat
gataacagccctgctttcacacacaatgaatataatttctatgttccagaaaacttaccc
atgtatggcacagtagggcttatcacagtaacagatgctgattctggagagaatgctgca
gtcactctgtctatattaaatggtcgagataatttcattatcgatccccttactggtgta
ataagacctaatattacttttgatagagaacagcaggggtcatacacttttcaggtgaaa
gcagtggatggaggaagactgcagcgttcctcaacggccaaagtgacgatcaatgttgtt
gatgtaaatgacaacaggcctgtttttgtaattccttcatcaaattattcatatgagttg
gttccaacatcatccaatccaggttctgttgttactaaagtctttgcagttgataatgac
acaggaatgaatgcagagctccgttacagcattataggagggaattcaaggggcttgttt
gcaattgaccagttaacaggcaatattacattgaaagagaaggtaatcacatcagatcat
ggcttgcacagactggtgataaaagtcaatgacctaggacagccagagtctctttatact
atagctcttgtgcatttgtttgtgaatgagacggtcaccaatagttcctacatacaagag
ctagtgcgcaggaatatggaaactccagttggccagaacattggggatggtgagataacc
ccacaaaccaatgattatgtcaagatcataattgcgattattgcaggcacaatgacggtt
attctggtaatttttgttactgcattagtacggtgccgccagactcccaggcacaaagtt
gtccagaaaaataagcagagtggtgagtgggtttccccaaaccaagagaataggcagatc
aagaagaagaagaagaagaagaaacgctctccaaaaagtcttctcctcaattttgtgact
attgaagaatctaagcctgatgatcctggccatgagcacataaatggcactttagacatt
cctgtggaactagaagaacagactatgggaaaatataactgggccactacaccaaccaca
tttaagcctgatagcccagatttagcaaagcactacaagtctgcttctccacagccaacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaactg
cctctggataacacctttgtggtgggctgtgattcactctccaagtgctcatcaagcagc
tcggatccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
attcacaccagacagcacacaaaagaaatgggaaggccacaaactcctttaaaagaatca
acgctggagccatggactcagccacagcctcagcgccgtgtcacatttcacctaccagat
ggctcccaggaaagctgcagtgacagtggacttggagaccatgagcccagcagtggtgcc
agcacatcgcacccgctgcccctcggcttccctcaggaggagtactatgagcaagcatca
cccaacagccggacagaaggagacggaaactcagaccctgagtccactattgaagtaaat
ctccagaaagccttggctgaggcctctgaaacctgcacgcaggagtgtctcatcctgggc
cattctgacaactgctggatgccaccttctttgacacagtatcaacaatccaacacacct
ttgccatcatttggcttccagcaaagctggggccgaggagccaggtctgacggacgacac
actcttgggaggccccttccaaaggatgacactgacaaaggccaagagcttgctttggct
actgttcctgttagttga
DBGET
integrated database retrieval system
