Tympanuchus pallidicinctus (lesser prairie-chicken): 128076000
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Entry
128076000 CDS
T08967
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128076000 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128076000 (ATRX)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128076000 (ATRX)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
128076000 (ATRX)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
128076000 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128076000
NCBI-ProteinID:
XP_052529203
LinkDB
All DBs
Position
Unknown
AA seq
2421 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEDTNSPPALSKTKSLGKSREPERSPTSMENN
REEGGSSSERVTLLGSSRSKRKPTVVTKYVGSDEEQILDETVNEDNSNENSENDVDMKSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEVPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTILDENNQWHCYSCHPEPLLDLVTACDSVFENLEQLLQQNKKKTK
VESEKSKIYDNTVKFSPKRNNSNCNGEEKNLDDSYSGSLTYSYKALMVPKDMLKKTKKLV
ETTANMNSSFVSFLKKAAENSEVSPAVQLRQLKAFRSVLGDIKKAHVALEEGLNLEIQAL
DVKIKEKNTKEKKTDVRSEKNEVKKDEGKEHVALKGDDPVKKQKKVVSEQPDNEPMDQDV
STVEKKDSKRTSGEDKRSGTNEEPQYEPNSTEALDMDIVSVPSSVPEDIFETLESAMEIQ
TAADEQGNGNSGTDHENPNTKLTTPLKDTKGSKLKTSAKGTKELIVKLTPVSLSESPFKS
EDQDSSLEKGSKDERTEKCDSVKQNSNADSERSTENETVSIAEESDLRRSPRVKTTPLRR
QTDVNPLTSNSEEDSNDTSNEKRKRRSSKQSRRKKDKRNSSDSAVDGPRPNKLCKSKKPA
IVDNSSDSDEMPAVLKEVAMMSRSSSDIDSNNELPAKDQKTSSVLKDQPVMDENGKRKRK
SSSSGSDLDAKRGKSAKNSATAKKKRQNYSDSSNYDSELEKEIKHLSKIESAKKAKKKYS
RKEDSYDSSEEEQRKKVSKKKVSPKKQRGKSSEDDAAEKSSPEKEINHSSEDKKVSVGSV
AKEKLKKNLKEEALKGKLDESSDAEKSLLEKEEGSPKSIKLTEAKKNKDFKKKKAQEDSS
SESTEQYAKKEHSFDSSKEKFKNKKRSENKEKKSENLKQKILKKEQEDSSSDVEKSSPEK
GSCNSSENDKTKNETVVKERKRRNVREKVPKRAQVDLSSDADKSPLKEESSSEDAVQSKR
RPEVKEKKKISQKKKITKKEQNESSSSDEESYEDNKKKIKKGSVKENKGSSLTEKKKISK
KVIVSSSSSSDKEENEEQNSTGDGSSDEQKIMPVTENLMLSAGTGFCQSSGDEGEAKSRT
VPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDASSDEESDEGKKKTGKQTENTGDD
EENEKEDNSESNSEEEDSKKPRYRHRLLRHRLTVSDGESGEEKKGKPKETKEGKRRNRRK
VSSDDSNGSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIKVPDD
SSSENNNKSNSEDEENDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAERE
REREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFM
WDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLNFRTALVVCPLNTA
LNWLNEFEKWQEGLEDDEKLEVCELATVKRPQERSYMLQRWQDEGGVMIIGYEMYRNLAQ
GRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPL
QNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEML
AGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAK
LFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSDETSMSLSSDDYAKKK
KSKGKKGKKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNAEELGNNPSAVIKSEEGKATS
SSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLI
EDFLELANREKTDKEKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGR
LFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQSKPVFVYRFLAQGTM
EDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPML
PKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNM
PTGTNMLPTNFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAARIQPLE
DIISTIWKENVTLTESQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMN
RRLQQQYNQQQQQHMSYQQTAMSHLMMPKPPNLIMNPSNYQQIDMRGMYQSVSGGMQPPP
LQRAPPPMRGKNAGPSQGKSM
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagcccatgagtgaaagcaagttgaatacattggtgcagaaactccatgac
ttcttggctcactcatcagaggaatctgaggacacaaactctcctccagcactatctaaa
accaaaagcctaggtaaaagtagagaacctgaaagaagtccaacctcaatggagaacaat
cgagaagagggtggtagttcttcagaaagagtcacgctcttaggatcgtcacgctcaaaa
aggaaacctacagttgtaacaaagtatgttggatcagatgaggaacaaatcttagatgag
actgtaaatgaagataattcaaatgaaaactcagaaaatgatgttgatatgaaaagcttg
cctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaagtccccaaaaag
cgtggagaggaaggactgcatggaattgtaagctgtacagcttgtgggcaacaggtgaac
cattttcaaaaggattcaatctatagacatcctacattgaaagttcttatttgtaagaca
tgctacaagtattacatgagcgatgacatcagccgtgattcagatggaatggatgaacag
tgtaggtggtgtgctgaaggtggaaatctgatttgctgtgatttttgccataacgccttc
tgtaaaaagtgcattttgcgcaacttgggtagaaaggagctatcaaccatactggatgaa
aataaccagtggcattgctatagctgtcatccagaacctctattggacttggtgactgcg
tgtgacagcgtgtttgaaaatttagaacagttactgcaacaaaacaaaaaaaagaccaaa
gttgaaagtgaaaaaagtaaaatatacgacaatacagtcaaattttctccaaagagaaat
aattcaaactgtaatggtgaagaaaaaaacctagatgattcgtattcaggttcactaaca
tattcttataaagcactaatggtgccaaaagacatgcttaagaaaacaaaaaaactggtt
gagactacagcaaatatgaattccagttttgtgagctttttgaaaaaggctgcagaaaat
tcagaagtaagcccagctgtgcaacttcgtcagctaaaagcttttagatctgtgctgggt
gacatcaaaaaagctcatgtggcactagaagaaggtctgaacctggagattcaagctttg
gatgttaaaatcaaagagaaaaataccaaagagaaaaaaactgatgttagatcagaaaaa
aatgaggtgaagaaagatgaaggaaaggaacatgtggcattaaaaggggatgaccctgtt
aagaagcagaaaaaagttgtatcagaacagcctgacaatgagccaatggatcaagatgtt
tcgacagtagaaaaaaaagacagcaaacgtacaagtggtgaagataaaaggtctggcaca
aatgaggaacctcagtatgagcctaatagtacagaggctttagacatggatatagtgtct
gttccctcatctgttcctgaagatatttttgagactctagaatctgctatggaaattcag
actgcagcagatgagcaagggaatggaaatagcggaacagatcatgagaatccaaataca
aaattgaccactcctttgaaagataccaaaggatctaaactgaaaacatcagctaaagga
accaaggaattgattgtgaaattgactcctgtatccctttcagagtctccatttaaatct
gaagatcaagacagcagtctggaaaagggaagcaaggatgaaagaacagaaaaatgtgat
tctgtaaagcaaaatagtaatgctgatagcgaacgttccacagagaatgaaacagtctca
attgcagaggaatccgatctcaggagatcaccccgtgtgaagaccacacctctgaggcgc
caaacagacgttaatcctttaacatcaaattcagaagaagatagcaatgacacaagcaat
gaaaaacgtaagagaagatcatcaaaacagtcaagaaggaaaaaagataaaagaaactct
tctgacagcgcagttgatggccctaggcctaataaactttgtaaatcaaaaaagccagct
atagtagataatagttcagattctgatgagatgccagctgttcttaaagaagtagctatg
atgagtcgcagttcttcagatatcgacagcaataacgaattaccagcaaaagatcagaag
acttcaagcgttctgaaggatcaaccagtaatggatgaaaatggaaagcggaaaagaaaa
agttccagttctggttcagatttagatgccaaaaggggcaagtcagctaaaaattctgct
accgcaaaaaagaagcggcagaactattcagattcttcgaactatgattctgagttagaa
aaagaaatcaagcatttgagtaaaattgagtctgcaaaaaaagctaagaaaaaatactca
cggaaagaagatagttacgattcttctgaagaagaacagaggaagaaagtcagtaagaaa
aaggtctctccaaagaaacaaagaggtaaatcttctgaagatgatgctgctgaaaagtca
tctccagagaaggagattaatcattcatctgaagataaaaaagttagcgtggggtcagtt
gctaaagaaaaactaaagaaaaacttaaaagaagaagctttgaagggtaagcttgatgag
tcttctgatgctgagaagtctttgctggagaaagaagagggtagtcctaaaagtattaag
ctaactgaagctaagaaaaacaaggattttaagaagaaaaaggcacaggaagattcttct
tcagagagtactgagcaatatgcaaagaaggaacacagttttgattcttcaaaagagaaa
ttcaaaaacaaaaaaagatcagaaaacaaagagaagaaatcagaaaatttgaaacagaaa
atcttaaagaaagaacaagaggattcctcttctgatgttgaaaagtcatctccagagaaa
ggaagttgtaattcttctgaaaatgacaagactaaaaatgaaacagtggttaaagaaagg
aaaaggaggaatgtaagagagaaagtacctaaaagagcacaggttgatttatcttctgat
gctgacaaatctcccctgaaagaggagagttcttctgaagatgctgtgcaaagtaaaaga
cgacctgaagtgaaggaaaagaaaaaaataagccagaaaaagaaaattaccaagaaagag
cagaatgagtcgtcctcttctgatgaggagtcttatgaagacaataagaaaaagattaaa
aaaggatccgtgaaagaaaataaagggagtagcttaacagagaaaaagaaaatatcaaaa
aaggttattgtctcttcctcctcctcatctgataaggaagaaaatgaagagcagaattcc
acaggtgatggaagcagtgatgagcagaaaattatgccagtgactgaaaatttaatgctg
tctgctggtacaggattttgtcagtcatcaggagatgagggagaggctaaatcaaggact
gttccaatggaggaggaggaagatgatgatgatgacgatcctgagaatagaattgccaag
aaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatgcatcttctgat
gaagagtcggatgaaggaaaaaagaaaactggaaagcaaactgaaaacacaggagacgat
gaagagaatgaaaaggaagataattctgaatcgaattcagaggaagaggactcaaagaag
cccagatacagacacagactgctgaggcacagactgacagtgagtgatggagaatctggt
gaagaaaagaaggggaaacctaaagaaacaaaagaagggaagcgcagaaatagaaggaaa
gtgagcagcgatgattcaaatggctcagagtttcatgaatctgcagttagtgaagaagtc
agtgagtctgaagatgaccaacgtccaagaacaaggtctgccaagaaagctgaggcagaa
gaaaatcagcgcagttacaaacagaaaaagaaacgaagacgtataaaagttccagatgat
tcttcaagtgaaaacaacaataagagtaattctgaagatgaggaaaatgatgattcaaaa
tctcctggaaaaggcagaaagaaaattaggaagattattaaagacgataagcttagaaca
gagacacaaaatgcacttaaagaggaagaagaaagaagaaaacgtatagcagaaagagaa
cgggagagagagaagctgagagaggtgatagagatagaagatgcttcacctctgaaatgt
cccattacaactaagctggttttagatgaagatgaagaaacaaaagaaccattagtgcag
gttcacaggagtatagttaccagactgaaaccacaccaagtagatggtgttcagttcatg
tgggattgctgttgtgaatctgttaaaaagacaaagacatctcctggttctggatgcatt
cttgctcactgtatgggtctggggaagacattacaggtagtgagctttctgcacacagtc
ttgctgtgtgacaagctgaatttccggacggctcttgtagtgtgtcccctgaacactgcc
ttgaactggttgaatgagtttgagaaatggcaggaaggtttagaagacgatgagaaatta
gaggtctgtgagttagcaactgtgaaacgccctcaagagagaagctatatgctgcagcgt
tggcaagatgaaggaggtgtgatgataataggctatgagatgtatcgtaatcttgcacaa
ggcaggaatgtgaagagtagaaaactgaaagaaatatttaataaagctttagtggatcca
ggccctgactttgttgtttgtgacgaagggcacatactaaaaaatgaagcatctgctgtt
tctaaggcaatgaattcaattcgttctaggagaagaataattctgacaggaacaccactg
caaaataatcttatagaatatcactgcatggttaactttattaaggagaatttgcttggt
tcaattaaagaattccgaaatcgatttataaatccaattcagaacggtcagtgtgcagac
tccactctggtggatgtcagagtaatgaagaagcgggcgcatattctctacgagatgtta
gctggatgcgttcagaggaaagattacacagcattaacaaagttcctcccaccaaaatat
gagtatgttctagaagttagaatgacacctattcagtgcaagctctaccagtattacttg
gatcatttgacaggtgtaggtggcggcaatgagggtggacgaggcaaagctggagctaaa
ctgttccaggatttccagatgctgagcagaatatggactcatccctggtgtttgcaactg
gactatattagcaaagaaaataagggctactttgatgaagacagtatggatgacttcata
gcttcagattctgatgaaacttcaatgagtttaagttctgatgattatgcaaagaaaaaa
aaatccaaggggaaaaaagggaagaaagaatgtagttcaagtgggagtggcagcgataac
gatgttgaagtcattaaagtctggaattcaagatctcgtggaggtggagaaggaaatgca
gaagaacttggtaacaacccttcagcagttataaaatcagaagaaggtaaagctacttcc
tcatccaatcctggtagcccagctccagactggtacaaagattttgtcactgatgcggat
gctgaggtgttggaacactctgggaaaatggttcttctctttgaaatccttcgaatggca
gaggagcttggggacaaagtcctagtgtttagccagtcccttatatcgttggatttgata
gaagattttctggagctggctaacagggagaaaactgacaaagagaagcctcctatctat
aaaggtgaaggaaaatggttccgaaacattgattactatcgcttggatggttcaactaca
gctcagtcaagaaagaaatgggctgaagaatttaatgatgaaactaacgtgagaggccgc
ttgtttattatatccactaaggcaggttcccttggaattaatctcgtggctgctaataga
gtaatcatctttgatgcttcttggaacccatcatatgatatccagagtattttcagggtt
taccgctttgggcagagcaaacctgtgtttgtgtacagatttttggcccagggtacgatg
gaagataaaatctacgatcggcaggtcaccaagcagtccctgtctttccgggttgtggac
cagcagcaagtggaacgtcattttactatgaatgagctaacagagctgtacacttttgag
ccggatttgctggatgatccgaattcagaaaagaaaaagaagagggacacaccaatgctg
ccaaaagatacaatcctggcagaattgcttcaaatcaataaggagtatatagtagggtat
cacgagcatgattcactcctggaccataaggaggaagaggagctcacggaagaggaaagg
aaggctgcctgggcagaatatgaggcagaaaagaagggcttgaccatgcgtttcaacatg
ccgacagggaccaacatgcttcccactaatttcaactctcaaacgccgtatattcctttc
aatttgggcgctctgtcagcgatgagcaatcagcagctggaggacctcattaatcaagga
agagagaaggttgtggaagcaaccaacagtgtaactgcagcaagaattcagccccttgaa
gacatcatttcaactatatggaaagagaatgtaacacttacagagagccaagtgcaggcc
ctggccctgagcagacaggcaagccaagagcttgatgttaagcgacgagaagccatctat
aacgacgtcctgactaaacaacagatgttgatcagttgtgttcagaggatactcatgaac
agaagactacagcagcagtacaatcagcagcaacaacagcacatgtcttaccagcaaaca
gcaatgagtcatctcatgatgccaaagcctccaaatttaatcatgaatccttccaactac
caacagatagatatgagaggaatgtatcagtcagtgtctggtggtatgcagccgccgcct
ttacagcgagcaccacccccaatgagaggcaaaaatgcagggccttcccaagggaaatcg
atgtga
DBGET
integrated database retrieval system
