Tympanuchus pallidicinctus (lesser prairie-chicken): 128076146
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Entry
128076146 CDS
T08967
Symbol
FMR1
Name
(RefSeq) fragile X messenger ribonucleoprotein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128076146 (FMR1)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128076146 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
128076146 (FMR1)
mRNA cycle factors
Stress granule specific factors
128076146 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
128076146
NCBI-ProteinID:
XP_052529477
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPAGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLEVPEDLRQMCAKESAHKDFKKAVGAFSVIYDSENHQLIILSINDVTTKR
ANMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKNIPQEEGMVPFVFVGTKDSITNATVLLDYHLNYLKE
VDQLRLERLQIDEQLRQIGATSRPPPNRTDKEKGYMTDEGPGLGRGSRPYRNRGHSRRGP
GYASGTNSEASNASETESDHRDELSDWSLAQAEEERDNYLRRGDGRRRGGGARGQGGRGR
GGFKGSDEQSRTDNRQRNSRDAKGRTADGSLLIRIDCNNERSVHTKTLQNTSSEGSRLRT
GKERNQKKEKADNADGQQPLVNGVP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaggtgcgcggctccaacggggccttttacaaggcatttgta
aaggatgtacatgaagattcgataacagttgcatttgaaaacaactggcaaccagagaga
caaataccattccacgatgtgaggtttccaccacctgcaggctacaataaagacataaat
gaaagtgatgaagtcgaggtttattccagggcaaatgaaaaagaaccctgctgctggtgg
ttggctaaagtgagaatgataaagggtgagttttatgtaatagaatatgcagcctgtgat
gctacgtacaacgaaattgtcacaatcgagcgtttgaggtctgtgaaccctaacaaacct
gcaacgaaagatactttccataaaatcaaactggaagtaccagaggatttaaggcaaatg
tgtgccaaagagtctgcacataaggacttcaaaaaggcagttggagctttttctgtaata
tatgattccgaaaaccatcagcttattattttatcaatcaacgatgtaacaacgaagcgg
gcaaatatgctgatagatatgcactttcgaagtcttcgcactaagttgtccctgattttg
agaaatgaagaagctagcaaacaactggagagttctaggcaacttgcatcacgatttcat
gaacagtttgttgttcgtgaagacttaatgggtttggctattggcactcatggtgctaat
attcagcaagccagaaaagtccctggagtgactgccattgatcttgatgaagatacctgc
acattccatatttacggagaggatcaagatgcagtgaagaaggcgagaagttatcttgag
tttgctgaagatgtcatacaagtcccaagaaatttagtagggaaagtaattggaaaaaac
ggaaaactgattcaggagatagtggacaaatctggtgttgtaagagtgagaattgaggct
gagaatgataaaaatattccacaagaagagggaatggtaccatttgtatttgttggaacc
aaggatagcatcactaacgcaactgttcttctggattatcatcttaattatttaaaggag
gtggaccagctacgtttggaaagattgcagattgatgagcagcttcgacagatcggagct
acttctaggccgccaccaaatcgtacagataaagaaaaaggatatatgactgatgaaggt
ccagggcttggaagaggtagtcgaccttacagaaacagagggcatagcagacgtggtcca
ggctacgcttcgggaactaattctgaagcatcgaatgcttctgaaacagaatctgatcac
agagatgaacttagtgattggtcattagcccaagcagaagaggaacgagacaactacctt
cgcagaggagatggacgaagacgtggaggtggtgcaagagggcaaggagggaggggtcgt
ggaggattcaaaggaagtgatgagcagtcacgaacagataaccgtcagcgtaattcaaga
gatgcgaaggggagaacagcagatggatctctactgatcagaattgactgcaataatgaa
aggagtgttcacactaaaacattacagaatacctccagtgaaggcagccggctgcgcaca
ggtaaagaacgtaatcagaagaaagagaaagcggacaacgcagatggccaacagccgctg
gtgaacggagtaccctaa
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