Tympanuchus pallidicinctus (lesser prairie-chicken): 128076225
Help
Entry
128076225 CDS
T08967
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128076225 (AFF2)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128076225 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
128076225
NCBI-ProteinID:
XP_052529618
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRNALKRKEWERRNQEVQQDEDLFASGFNLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSVPQTPIDKNEQNFFSEQRNRMIP
SHQISGHSSTSMPPPSSLSSNSVLLHGHQSNRKSRTDWSRSGHNSSGAQPSQSSSQQSRT
KHSSSHDQTQGRYEDLYNCQSEQHKSGGTEEANSMAASSHSRRHTHSKSAAGEHTYKENS
HSKSPTELEFVGHGPGSPLPSTSLLSANNGLSSQNFPPGLHCKSTMVQQKPTAYVRPMDG
QDQVPNDSPELKPPVEIESGYGNQSFGTLLEGKVNTPSSKNKVPKLNIPPVGEVTLPNDS
SCVEEILREMTHSWPPPLTAIHTPGKAEQTKFSIPSKDSQHLTSGYNVQKWSDPGGKVAA
KSVPQKSMLEDDLKLSSDEDDSEQAAEKTKLRNIPVNGLPVSVAHAAGLAHSSGGSGSSS
ESESSSESDSDSESSSSDSDCNEESRSATPEPEPPSTNKWQLDKWLNKVNPHNKTIISNQ
NEPHSETSSQPQSSQQAEGQNKGKLSNSLPPTDSKDRAILSPIREKAKPRVAQKTPEAKS
SKQKSPAHNEPVAQRTTGKKQPKKVERTSSVEEYNWPKPNNTSNTPKEKDTQEPPEQPKV
RTKAAVGKTAPRKEPRTSTGLTSEKKKYRGPSKIVPKSREFIETDSSTSDSNTDQEESLQ
AKILPACSGPANGIKVKDSGSNILSVSSLTSNGSNTSIDQTSNDLEEQLFSPIPIVQNEL
LSPLREYEELKSLWVKIDLSLLSRIPGQEPFETTSVKTEPREANVKHRRPSRESPTPAAE
KTSTKSKRKHKSENLETFVETKKQRLEDPSASCLLPPCISPIPNHRLTSTKESSSNSVKK
MAKKREEKLFPPPLSPLLDEPVHRRHSTDNSSFSQETNVTNTPQTSSSSSSVSKHRKNEN
KSSSNPKGICEEETHSAPTANTVLDTNHLETDVWSAMPTLSNGNSESRRPKITFDDVLHN
ADYYMQEAKKLKHKADALLEKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSETV
ELIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKN
SSKASQAPSPWGGNGKSTETPSPMSLSPSPVSSAGGSAGTTGSSSAGTITIPQRIHHMAA
SHVNITNNVLRSYEHWDMADKLTKENKEFFVDLDSVMGPLTQHSSMTNLVRYVRQGLHWL
HIEAHLL
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgactttttcagggactgggacttagagcagcagtgtcactatgagcaa
gaccggaatgcacttaagagaaaagaatgggagagaagaaaccaagaagtccagcaagat
gaagacctctttgcttcaggttttaatctctttggggaaccctacaagacaaataaaggt
gacgctcttgcaaaccgtgtccagaacacattgggaaactatgatgagatgaaggatctg
ctaactaaccattccaatcagagccatcttgtaggaatcccaaagaattctgtcccacag
acgcccattgacaaaaatgaacagaactttttctcagaacaaagaaacaggatgatccct
tctcatcagatcagtggccactcatcaacatcaatgcctccgccttcgtctctgtcatct
aattctgttttgttacacggtcaccagagcaacaggaagtcgaggacagactggtcacgc
agtggtcacaactctagtggtgcccagccaagccaatccagtagtcagcagagtcggaca
aagcatagctcttcccatgaccagacacagggcaggtatgaagacctctataattgtcag
agtgagcagcataaaagtggaggaactgaggaagcaaattctatggcagcatcttcacat
tcaaggcggcatactcattcaaagtcagcagctggagaacatacttacaaagaaaacagt
cattcaaagtcacccacggagcttgagtttgtaggtcatgggcctggatctccacttcct
tccacatctttgttgtctgcaaacaatggtctttcaagccagaatttcccaccaggactt
cactgtaaaagcaccatggtccagcaaaagcctacggcatatgttaggccaatggatggt
caggaccaggtacccaatgattcacctgaactgaaacctcccgtagaaatcgagagtgga
tatggaaatcagtcctttggaacactgttggaaggaaaagtaaacacacctagttcaaag
aataaagtaccaaagcttaatattcctcctgttggtgaagttacccttcccaatgactcc
agctgtgtggaagaaatactgcgtgagatgacccattcctggcctcctcctcttactgct
attcacactcctggaaaggctgaacagaccaagttttctatcccaagcaaggactcccaa
catctgacctcaggatacaatgtacaaaagtggagtgatccaggagggaaagttgcagct
aagtcagtgccacaaaagtcgatgcttgaggatgatctcaaactcagcagtgatgaagat
gacagtgaacaggctgctgaaaagacaaaattgagaaacattcctgtaaacggcctgccg
gtgtcagtggcacacgcagctggcttagcccattccagcggtggctccgggagctccagt
gagtccgagagcagctctgagtccgactccgacagcgagagcagctccagtgacagcgac
tgcaacgaggagtcacgcagtgccacaccagagcctgaacccccctcaacaaacaaatgg
cagctggataagtggctgaataaagtgaacccccacaacaagaccatcatcagcaatcaa
aatgagcctcacagtgagaccagctcccagccgcagagcagccagcaggctgaaggacaa
aacaaagggaagctcagcaacagcctgcccccaaccgattccaaagaccgggcgatcctc
agtcccatccgtgagaaagccaaaccacgggttgcccagaaaaccccagaggcaaaaagc
tccaagcagaagtcgccagctcataatgagccagttgcacaaaggactactgggaaaaag
caacccaaaaaggtagaaaggacttccagtgtagaagaatataactggcccaaaccaaat
aataccagcaacactcccaaagaaaaagacacacaggaaccccctgagcagccaaaggtt
cgaactaaagcagcagttggcaagaccgccccaaggaaggaacctcgaacgagcacaggt
ctcacttcggagaagaaaaagtacagaggccccagcaaaattgtccccaagtcccgggaa
tttattgaaactgattcatctacttctgactcaaatacagatcaggaggagagcctgcag
gctaagatattgccagcttgtagtggaccggccaacggcatcaaagtgaaggactctggc
agtaacatcctcagtgtaagtagcttaactagcaatggcagcaacacatccatcgaccag
accagcaatgacttggaggagcagctcttttctcctatcccaattgttcaaaatgaactg
ctgtccccactgagagaatatgaagaactcaaatctctttgggtgaaaatagacctcagt
ttactctccaggatacctgggcaagagccttttgagaccacatctgtgaaaactgaacca
agagaggcaaatgtgaaacacagacgaccatctcgagagtcccctaccccagcagctgag
aaaacatccacaaaatccaaaaggaaacacaagtcggaaaacctggaaacctttgttgaa
accaagaagcagcgcctggaggacccttcagcttcatgcttgctcccaccttgtatctct
ccaataccgaatcacagattaaccagcactaaagagagcagcagtaactcggtgaagaag
atggcgaagaaaagagaagagaagctcttccctcctccattatcccccctgttggacgag
cctgtgcaccgtcggcacagcactgacaacagctccttcagccaagaaaccaacgtcacc
aacacccctcagaccagcagctcttcctcctcggtttctaaacacagaaagaatgaaaat
aaatcttcttctaaccccaaaggaatctgtgaggaagaaacacacagtgcaccaacagcc
aacactgttcttgatacgaaccacctagaaacagacgtctggtctgcaatgccaactctt
tccaatgggaattctgagtccagaagacctaaaatcacatttgatgatgtgctccacaat
gcagattattatatgcaagaagctaagaagctaaagcataaagcagatgcattgctggag
aagtttggcaaagcagtgaattatgctgatgctgccctgtccttcatcgagtgtgggaat
gctatggagcgagatccattagaagctaaatctccatataccatgtactcagagactgtg
gaactcatcaggtatgcaatgaggctcaagaatttcacaggctcttctgccacagaaggg
gacaagaaactagcagttttatgctaccgatgcttatcgcttctgtacttgagaatgttt
aagctaaagaaggaccatgctatgaagtactccagatctctgatggaatattttaagaac
tcttcaaaagcctcacaggccccctcaccttggggcggcaatggaaagagcacagaaaca
ccatcacctatgtccctgagtccatcccctgtcagctctgccggaggcagcgcaggcacc
actggctcctcctcagcagggaccatcaccatccctcagcgcatccaccacatggctgcc
agccacgtcaacatcaccaacaatgttctgcgaagctacgagcactgggacatggctgac
aagctgactaaggagaataaagaattctttgtagacctggactcagtgatgggaccctta
acacaacacagcagtatgaccaatctggttcgttacgttcgccaaggactccactggctc
cacattgaggctcatttgttgtag
DBGET
integrated database retrieval system
