Tympanuchus pallidicinctus (lesser prairie-chicken): 128076377
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Entry
128076377 CDS
T08967
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai00562
Inositol phosphate metabolism
tpai01100
Metabolic pathways
tpai04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
128076377 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
128076377 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128076377 (SYNJ1)
Enzymes [BR:
tpai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
128076377 (SYNJ1)
Membrane trafficking [BR:
tpai04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
128076377 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
128076377
NCBI-ProteinID:
XP_052529873
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MAFSKGYRVYHKLDPLPFSVIVEARNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAY
GLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIESTDEDRISEVR
KVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIYLD
DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVN
LLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLE
CGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTR
FQEVFRSMWSVNGDSVSKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAIDVLL
LGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKVRVCVGTW
NVNGGKQFRSIAFKNQTLTDWLLDAPSIAGIHEFQDRRSKPVDIFAIGFEEMVELNAGNI
VNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKT
GMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFIEIARKLSFPMGRMLF
SHDYIFWCGDFNYRIDIPNEEVKELIRQQNWDSLIAGDQLINQKNSGQIFRGFLEGKINF
APTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDNSKVPYT
WNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIATQGPPDGTVMVSI
KSSSAEESYFDDNLIDDLLQKFASYGEVILIRFVADKMWVTFLEGSSALNVMNLNGTEIL
GKIINISLKNPDWIRSLEDEMNLEKINVGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSA
EVEEILPQHLQPTLSSGLGTSPSSSPRSSPCQSPTLSDGPTLPVRPSRAPAKTPGPPVSL
HNETQLGTQQKDTSQTLEPKRPPPPRPVAPPARPTPPQRPPPPSGGRSPAPARKEFGGLG
APPSPGVAKREVEAQKSPGTQRKDNLVRSQPPLSTGFPSAGTVGYATARPTIPPRAGVIS
APQSHVRPSGGRPTPEPQTKPAEPPRSSPLLPEPLKPQAAPAQPVTQPPSALKMQEPLIP
VASHPPQTSAPPSLEPPPQPPPRSRSSHTLPSESAPSHQQIKTNGTYGTKLETQLNSDPF
EDLSFQLLVSKMQTSTQTSAVPTLNQKESMQLPSATQRNYILNTVSCMPAMPPAPTLTIS
QERTRSSPNPFVTGLNRTNPFTERTLTAGNPFRTETQASEITSHSQEGHAAFNPFPFLNP
PSSNTSKPVFSVNAPENSFCLRSRSLMVKNVQPKGWVTFDEEDDNFHVKLKPSKSVPDFK
QIGSRKSAGSPDLLGTEKDTFLGSDFTFGNDWNKSSTDCFYTMPARRPPAPPVPSRATSN
RSPADPFTSLAPKVSPTQDFTER
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagtaaaggatatcgtgtctatcacaagctggatccactcccgttcagtgtg
atagtggaagccagaaacagagaggaatgtctcatgtttgaatctggagctgtggctgtc
ctctcatctgcagaaaaagatacaatcaagaatacctactccaaagtaatggatgcatat
gggcttctgggagtattaagattaaacctaggagacacgttgctgcattatttggttcta
gtaacaggatgcatgtctgtgggaaagattcaagactccgaagtctttcgagttacctcc
actgagttcgtatcgttacgaatcgaatcaacagatgaagatcgtatttcagaagtgcgc
aaagttttgaattcaggcaacttttattttgcatggtctgccactggtgtcagcttagat
cttagtctcaatgctcaccgcagcatgcaagagcacaccactgacaacaggtttttctgg
aatcagtcactgcatttacatttgaagcactatggagtgaactgtgatgactggttgtta
cgtctcatgtgtggaggagtggagatcaggacgatttatgcagctcacaagcaggcaaag
gcttgtctcatttcacgactaagctgtgagcgagcagggaccaggtttaacgtccgggga
accaacgatgatggtcacgttgctaactttgttgaaacagagcaggtaatatatttagat
gattctgtgtcatctttcatccagattcgagggtctgttccattgttttgggagcagcca
ggcctgcaggtgggatcccatcgtgtcagaatgtcaaggggtttcgaggcgaacgcacca
gcttttgacaggcatttccgaactcttaaaaatttgtatggcaaacaaattattgtgaat
ttacttggggcaaaagaaggggagcacatgctcagcaaagcttttcagagccacttaaaa
gcatctgaacattcagctgatataaagatggtgaactttgactatcatcaaatggttaaa
ggtggaaaggcagaaaaactgcacagtgtgcttaagcctcaagtccagaaattcttagaa
tgtggatttttttattttgatggaaaggaagtaaaaagatctcaaagtggtactgtcaga
acaaactgcttggactgtctggatagaacaaacagcgtgcaggctttctttggcttagag
atgctaacaaaacaactggaggtgttaggattagctgagaagcctcagctggttactcgc
tttcaggaagttttccgatccatgtggtctgtgaatggagattctgtcagtaaaatttat
gctgggactggagcccttgaaggaaaagccaagctgaaggatggtgctcgttctgtgacc
agaacgattcaaaataacttttttgatagctccaagcaggaggccattgatgttttgtta
ttgggaaataccctaaatagtgatttagcagataaagcacgggctctcttaaccaccagc
agtttacgcgtttcagagcaatcattacaatcagcatctgtaaaagtgctgaagagtatg
tgtgaaaacttttataagtatgcaaaaccgaagaaagttcgagtctgcgttgggacgtgg
aatgtcaatggggggaagcagttccgaagtattgcctttaaaaatcagaccctcactgac
tggcttctggatgcaccaagcatagctggtattcatgaattccaagatcgaagaagcaaa
cctgtagacatatttgccattggatttgaagaaatggtggagttaaatgcaggaaacatt
gtgaatgcaagcacaaccaatcagaagctctgggctgcagaactgcagaagaccatatca
agagattacaagtatgtgctgctggcttccgagcagttagtgggcgtctgcctctttgtg
ttcatcaggccccagcatgctccctttatcagagatgttgctgtggatactgtaaagact
ggcatgggaggagccactggtaataaaggtgcagtagcaattcggatgctgtttcataca
tccagtctttgctttgtctgcagccactttgctgcagggcaatcacaagttaaagaaaga
aatgaagacttcatagaaatagctcgcaagctcagttttccaatgggaaggatgcttttt
tcccatgactacatcttttggtgtggtgactttaattatcgaatagatattcctaatgag
gaggttaaggaactaatccgacaacaaaactgggattcccttatagcaggagaccagctt
atcaatcagaaaaattctggacagatttttaggggatttttggaggggaaaataaacttt
gctcctacgtacaagtatgatctgttttctgatgactatgacaccagtgaaaagtgtcgc
acgccagcgtggacagatcgtatactttggagaagaagaaaatggccctttgaccgatca
gctgaagacctggatcttctgaatgccagctttcatgataacagtaaagtcccttataca
tggaatcctggcactttgttgcactatggaagagcagagttgaagacatctgatcatagg
cctgtggtggcattgattgacattgacatatttgaaattgaagcagaagagagacagaaa
gtttataaagaggtgattgcaacacagggcccacctgacggtacagtaatggtctccatc
aagagttcttcagcagaagaaagctactttgatgataacctgattgatgaccttcttcaa
aaatttgcaagctatggagaagttatacttataagattcgtggcagacaagatgtgggta
acatttttggaaggaagctctgctttgaatgttatgaatttgaatggtactgagatacta
ggaaagattataaacataagtttaaaaaatccagactggatcagaagtttggaggatgaa
atgaatctagagaagattaatgttgggctgccttcatcaacaagctccaccttgctttgt
gaagacgctgaggttactgcagactatgatatggaaggtgacattgatgactatagtgct
gaagtagaagaaatccttcctcagcacctacagccaaccttaagctctggccttggaacc
tccccaagctcctcaccacgttccagtccctgtcagtctcctacactgtcagatggaccc
acacttccagtgagaccgagccgagccccagcaaaaactcctggaccaccagtttccctg
cacaatgaaactcaacttggtacccagcagaaagacacttctcagaccttggagcctaag
cgccctccaccacctcgccccgtcgctcctcctgcacgtcctactccaccacagaggcca
cctccaccatcaggcggtaggagtcctgcacctgctagaaaggagtttggaggtcttgga
gctcctcccagtcctggggtagctaagagagaagtagaagcacaaaaaagtcctggaaca
caaagaaaagataacttagtacgtagtcagcctccactttcaactggatttccaagtgca
ggaactgttggatatgctactgctcgaccgactattccacctcgagctggagttattagt
gcaccacaaagccatgtccgcccctctggtggaagaccaacacctgaacctcaaaccaaa
ccagctgaaccaccaaggagctccccattgcttcctgaaccactaaagcctcaggctgct
cctgcccaacccgtgactcagccaccatctgcactaaagatgcaagagcctttgatacct
gtggcatcacatccacctcagacaagtgccccaccaagtctggaaccccccccacaacca
cctccccgtagccgatcatcccacactttgccttctgaatctgctccttcacatcagcaa
attaaaacaaatggaacctatggcactaaacttgaaacacagttaaatagcgaccctttt
gaagatttgtcatttcagctgcttgtgtcaaagatgcagacatctactcaaacatcagct
gttccaaccttaaaccaaaaggaatcgatgcagttgccttccgcaacacaaagaaattat
attttgaatactgtaagttgcatgccagcaatgcctcctgctccaaccctgaccatatcc
caggaacgcacgcgcagctccccaaatccatttgtcactggactgaaccgcacaaatcca
ttcactgaaagaacgcttactgctggaaacccatttagaacagaaactcaagcatctgaa
ataacttcacattcacaggaaggacacgccgctttcaatcctttcccttttctaaatccc
cccagttctaatacgagcaagcctgtattttctgttaatgcacctgagaacagtttttgc
ttgcgaagtagatctctcatggtaaaaaatgtacagccaaaaggatgggtaacgtttgac
gaggaggatgacaatttccacgtaaagctaaagccatctaaaagtgttccagattttaag
caaatcggttccaggaagtcagctggatctccagatttgctgggcactgaaaaagatact
tttcttggttcagactttacctttggtaatgactggaataaaagttctactgattgtttc
tatacaatgccagcaagaagaccgcctgcacctcctgtcccatcgagagcaaccagcaac
agatcccctgcagatcctttcacttctttggcacctaaggtgtcaccaacacaagatttt
acagaaagatag
DBGET
integrated database retrieval system
