Tympanuchus pallidicinctus (lesser prairie-chicken): 128076542
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Entry
128076542 CDS
T08967
Symbol
USP9X
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpai01002
]
128076542 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128076542 (USP9X)
Enzymes [BR:
tpai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128076542 (USP9X)
Peptidases and inhibitors [BR:
tpai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128076542 (USP9X)
Ubiquitin system [BR:
tpai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128076542 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Motif
Other DBs
NCBI-GeneID:
128076542
NCBI-ProteinID:
XP_052530281
LinkDB
All DBs
Position
Unknown
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHLYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVEGTSTISPINQATHDQAVVLQN
ALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGNEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKIVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQIIQNEQSENEHSGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCF
GGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDSELTKYISELAITTKPHQI
KMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLTNPYGDPNLSQPIMALQQNVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQNNHVHGQPYTGP
AAHHMNNPQRTGQRAQENYEGSEEVSPPQTKD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccggtaggaggcaatgatagccagggccaggctcct
gatggacagtcccagcctcccctccagcagaatcagacatcttcacctgattcttcaaat
gagaactctccagctaccccgcctgatgagcagggccaaggagatgctccacctcagctt
gaagatgaggagcctgcgtttccacacacagacctggcaaagttggatgacatgatcaac
aggcctcgatgggttgttcctgtgttgccgaagggggaattagaagttcttctagaagct
gctattgacctgagtaaaaaaggccttgatgtcaaaagcgaagcatgccagcgatttttt
cgagatgggttgacaatatctttcacaaaaatccttactgatgaggcagtgagtggctgg
aagtttgaaatccatagatgtattattaacaacactcatcgactagtagaactctgtgtg
gccaagctgtcccaagactggtttccccttcttgaacttcttgccatggccttaaatcct
cactgcaaattccatctatacaatggtacacgtccctctgaaacagttcctgcaggagtc
cagcttgctgaagatgaactttatgcacgtcctcctgacccacgctcaccaaagggttgg
ctagtagatcttatcaacaaatttggcacattaaatggatttcagatcttgcatgatcgc
ttcatgagtggatcagcgctgaatgttcagataattgcagctctcatcaagccatttgga
caatgttacgaatttctaacattgcatacagtgaaaaaatacttccttccaattatagaa
atggttccacaatttttagaaaatctaacagatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctctatcaatgataatcaaatctctaaagaacttagcttcaaga
gttccaggacaagaagaaactgtaaaaaacttagaaatatttaggttaaaaatgattctt
aggttattacaaatttcttctttcaatggtaaaatgaatgcactaaatgaagttaacaaa
gtaatatccagtgtatcatattatactcaccggcatggtaatcctgaagaggaagaatgg
cttacagctgaaagaatggcagaatggatccagcagaataatattttatcaattgtgttg
agagatagtcttcatcaacctcaatatgtagagaagttagagaagattcttcgttttgtc
atcaaagaaaaagcccttactttgcaggatcttgacaacatttgggctgcacaggcagga
aaacatgaagccattgtaaagaatgtacatgacctccttgcaaaattagcttgggatttc
tctcctgaacagcttgatcacttgttcgattgttttaaggcaagttggacaaatgcaagc
aaaaaacagcgtgagaagctactcgagttaatccgtcgtctcgcagaagatgacaaggac
ggcgtgatggcacacaaagtgctgaaccttctgtggaatttggctcacagtgatgacgta
ccagttgatatcatggaccaggctcttagtgcccatattaaaatcttagattacagctgt
tcacaggatcgagatacacagaagatccagtggatagatcgttttatagaagagcttcgc
acaaatgacaaatgggtcattcctgcactgaaacagattagagaaatttgcagtttgttt
ggtgaagcaccacaaaacttgagtcaaacacagcgaagtccccatgtgttttaccgacat
gacttaatcaatcaacttcagcacaatcatgccctagtgacattagttgcggaaaatctg
tctgcctatatggaaagcatgaggcagtatgctaaagagcacggtgaatatgatccgcaa
actgtaagaccagggagcagatacagtcatgtgcaagaagtacaggagcgacttaatttc
ttacgatttttattgaaggatggtcagctgtggctctgtgcccctcaggcgaagcaaata
tggaagtgtttagctgaaaatgctgtttatctttgtgatcgcgaagcctgttttaaatgg
tattccaaactaatgggggatgaaccagacttagaccctgacattaataaggacttcttt
gaaaataatgtgcttcagctggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaaggaaagctagtagcaaagagacgagcc
tatatgatggatgatctggaattaataggattagactacctttggagggttgtgattcag
ggaaacgatgacattgcaaatagagcaattgatcttcttaaagagatctatactaacctt
ggtccacggttacaagttaatcaggtagtgattcatgaagacttcattcagtcctgtttt
gatcgtctcaaagcctcctatgatacattatgtgtgttggatggagataaagatagtatt
aattgtgcaagacaagaagcaatacgaatggtgagagtgttgactgttttaagagaatat
ataaatgaatgtgacagtgactaccatgaagaaagaactattctacctatgtcaagagct
ttccgtggaaaacatatcacactggtagttcgttttccaaaccaaggccggcaggtggaa
gatttggatatttggtctcacacaaatgacaccattggccaagtgcggcgttgtattctc
aatcgcatcaaagccaacagtgcgcacacaaaagtagaactgttcattggtggggagctg
gtggatcctgcagatgatagaaaattaatcggacaattgaatctcaaagataaaacgcta
attacagctaagcttacacagataaattctaatatgccctcaagtcctgatagttcttct
gactcttcaactggttctccgggcaaccatggcaatcactacagcgatggtccaaaccca
gaagtcgaaagctgtttgcccggagtgatcatgtcactgcatcctcgatacatttctttt
ctttggcaagttgcagacttgggcagtagcctaaatatgccacctcttagagatggagca
cgtgttcttatgaagctcatgccaccagataacactacagttgagaaactaagagctatt
tgtttagatcacgcaaaacttggagaaagcagccttagtccatcccttgactctctgttt
tttggtccctctgcctcacaagtgctatatctaacagaggtagtttatgccttgttaatg
cctgccagtgcacctctaggagaagatgccagcgacttccagtacaacttcttaaaaagt
ggtggtttgcctcttgtattgagtatgctgactcgaaataacttcctgcccaatgcagat
atggaaactcggaggggtgcctaccttaatgctctaaaaatagccaagttattgctaaca
gcaattggatatggccacgttcgagctgtggcagaagcttgtcaaccagttgtagaaggc
acaagtacaatttcaccgataaaccaggctacacatgaccaggcagtggtgctacaaaat
gccctacaaaacattcctaatccaacttcagaatgcatgctaagaaatgtagcaatacgt
cttgcacagcaaatatctgatgaggcttcaaaatatatacctgatatctgtgttattagg
gcagtgcaaaaaattgtctgggcgtctggttgtgggtcagttcaacttgtgttcagttct
aatgaggaaatcagtaaaatctatgaaaagacaaatgcaggaaatgaaccagatatggaa
gatgaacaagtttgctgtgaagcattggaggtgatgaccctatgttttgctttgattcca
acagcactggatgctctaagtaaagaaaaagcatggcagacgtttatcattgatttgcta
ttgcactgtcacagcaaaattgttcgtcaaatggcacaggagcagttctttctaatggct
accaggtgttgcatgggacagagacctctccttttcttcattactctgctgtttacagtt
ctagggagtactgccagagagagagctaagcattctggagactacttcactctcttaaga
catcttcttaactatgcctacaacagtaatattaacgtgcccaatgctgaagttcttctc
aataatgaaattgactggctgaaaaggatcagggatgaagtaaaaaggacaggggaaaca
ggtgttgaagaaaccattttagagggtcaccttggagtaacaaaagagttgttagcattc
cagacacctgagaagaaataccatattggttgtgaaaaaggaggtgctaatctcattaag
gaattgatagatgacttcatctttccagcatccaatgtttatttacaatacatgagaaat
ggggaattgcctgctgagcaggccataccagtctgtagttcaccagctactattaatgct
ggctttgagctactagttgcactagcagttggatgtgtccgaaatctcaaacagatagta
gacaccttgactgagatgtattacataggtacagcaatcactacttgtgaagcgcttaca
gaatgggaatatctaccacctgttgggcctcggccaccaaagggatttgtaggattaaaa
aatgctggtgccacttgttacatgaattctgttattcagcagctgtacatgattccagcc
atcaggaatgggattcttgcaattgaaggcacaggcagtgatgtagacgatgatatgtct
ggggatgaaaagcaggacaatgagagcaatgttgacccacgagatgatgtgtttggctac
ccacatcagtatgaagacaaaccagcactgagtaaaacagaagacagaaaagagtacaat
attggagttctgagacatctccaagtaatttttggtcatttagcagcttccaggctacag
tactatgtaccaagagggttttggaaacaatttagactctggggtgaacctgtaaatctg
cgtgaacaacatgatgctttagaattctttaattccttggtggatagtttagatgaagct
ttgaaagctttgggccatccagcaatgttaagtaaagttttaggaggatcctttgctgat
cagaagatttgtcaaggatgccctcataggtacgaatgtgaggaatccttcacaactctg
aatgtagatataagaaatcaccaaaaccttcttgattctttggaacagtatgtcaaggga
gatctattggaaggtgcaaatgcatatcattgtgaaaaatgcaacaaaaaggttgacaca
gtgaaacgcttgttgattaagaagttgcctccagttcttgccatccagttgaagcgattt
gattatgactgggaacgggaatgtgcaatcaagttcaatgactattttgaatttccaagg
gagctggacatggagccttacacagtagcaggtgtagctaaattggaaggagatgatgta
aatcctgaaaatcaaataatacaaaatgaacagtcagaaaatgaacattctgggagcaca
aaatacaggcttgttggtgtgcttgtacatagtggccaggccagtggcggacattattac
tcttacattatccagagaaatggtggcgatggtgagaaaaatcgatggtataaatttgat
gatggagacgtgactgagtgtaaaatggatgatgatgaagaaatgaaaaatcagtgtttt
ggtggagagtacatgggagaagtatttgatcatatgatgaagcggatgtcctacagacgc
cagaagaggtggtggaatgcttatattcttttttatgaacgtatggacacaatagacaaa
gacagtgaactaacaaaatacatttcggaactggctatcaccactaaaccacatcaaatt
aaaatgccatcagccatcgaacgaagcgtacggaaacagaacgtgcagttcatgcataat
cgtatgcagtacagcctggagtacttccagtttataaagaagttgcttacttgtaatagt
gtctacttaaatcctcctccaggacaagatcatctgttgccagaagcagaagaaataact
atgattagcattcaacttgctgctagatttctcttcaccacaggatttcatacaaagaaa
atagtccgaggcccagctagtgattggtatgatgcattatgcattcttctccgtcacagc
aagaatgtacgcttttggtttgcacacaatgtcctttttaatgtttcaaaccgcttctct
gagtaccttttggaatgccctagtgctgaagtgaggggtgcatttgcaaaacttatcgta
tttattgcacatttttcgttgcaagatggaccgtgtccttcaccttttgcctctcctgga
ccttccagtcaggcttatgataacttaagtttaagtgatcacttactgagagcggtacta
aatcttcttcgaagagaagtatctgaacatgggcggcatttgcagcagtatttcaatctg
tttgtgatgtatgccaatctaggtgtggcagagaagacacaacttctgaaactaaatgtt
cctgcaaccttcatgcttgtggctctggatgaaggtccaggccctccaattaagtaccag
tatgctgaactggggaagctgtacactgttgtgtcccaactgatccgatgttgcaacgtg
tcatcgcggatgcagtcttctatcaatggtaatcctccacttaccaacccctacggtgat
cctaatttatctcaacccataatggcacttcagcagaacgtagcagacatcttgtttgtg
agaaccagttatgtgaagaaaattattgaagactgcagcaattctgaagagaccatcaaa
ttgcttcgtttctgctgttgggagaatcctcagttctcttccactgtcctaagtgaactt
ctctggcaggttgcgtattcatacacatacgagcttcgaccttacttggatctgcttctg
caaatcctattaattgaggattcttggcaaactcacaggattcacaatgcgcttaaggga
atcccagatgacagggatggactatttgacaccattcaacgctccaagaaccattatcag
aaaagagcttaccaatgtataaaatgcatggtagccctcttcagcaactgccctgtagcc
taccagatccttcagagtaacggagatttgaagagaaaatggacctgggcagtagaatgg
cttggagatgagcttgagcgtagaccatacactggcaatccccagtacacctataataat
tggtctccacctgtacaaagcaatgaaacatcaaatggctacttcctagagagatcacac
agtgctagaatgactcttgcaaaagcttgtgaactctgcccagaggaggaaccagatgat
cctgatgctccagatgaacatgagtcttctccacctgaagatgcaccactgtatccccat
tcacctggttcccagtatcaacagaataaccatgtgcatggacagccatacacaggcccg
gcagcacatcatatgaacaaccctcagcgaactggccaacgagcacaagaaaactatgaa
ggcagtgaagaagtttccccgcctcagacaaaagattag
DBGET
integrated database retrieval system
