Tympanuchus pallidicinctus (lesser prairie-chicken): 128076543
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Entry
128076543 CDS
T08967
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
128076543
NCBI-ProteinID:
XP_052530319
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MHLQISLLLLFCLNIVHGSDGYFSERYQKQSSIKGPPHFLPFNVKSQGVQMRGEQGPPGP
PGPIGPRGQPGPAGKPGFGSPGPQGPPGPPGPPGFSTVGKPGMPGLPGKPGERGLNGEKG
EAGPVGLPGARGPQGPPGIPGPAGLSVPGKPGPQGPPGAQGPRGLPGEKGEPGVPGMNGQ
KGEMGFGVPGRPGSRGLPGPQGPQGLPGPAGIGKPGENGLPGQPGMKGDRGLPGARGEAG
TPGPQGPPGERGEVGIGKPGPMGPPGPAGIPGAKGFPGPAGLPGSPGLPGFGKPGLPGMK
GHRGPEGPPGFPGPKGDQGPAGVPGEPGPAGSPGNMGPQGLKGLPGENGLPGPKGDMGPA
GPAGFPGAKGERGLPGLDGKPGYPGEQGPAGPKGHPGLPGQKGDTGHAGLPGLPGPVGPQ
GVKGVPGINGEQGPRGPSGIPGIRGPIGPPGMPGAPGAKGEPGAPGLPGPAGIATKGLRG
PMGPPGPPGPKGNNGEPGLPGPPGPPGPPGQATIPEGYVKGESRELSGMSFMKAGANQAL
TGMPVSAFTVILSKAYPGATVPIKFDKILYNRQQHYDPRTGIFTCRIPGLYYFSYHVHAK
GTNVWVALYKNGTPVMYTYDEYQKGYLDQASGSAVIDLMENDQVWLQLPNSESNGLYSSE
YVHSSFSGFLFAQI
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcatttacaaatatccttactgctgctgttttgtctaaacattgtccatggtagcgat
ggatacttttccgagcgataccagaaacagtccagcatcaaggggccaccacactttcta
ccattcaatgtaaagagtcaaggtgtgcagatgaggggtgaacaaggtccccccggtccc
ccaggccctattggaccaagaggacaaccaggtcctgcaggaaaaccaggctttggaagc
cctggtccgcaaggtccccctggtcccccaggaccacctggattctccactgttggaaaa
ccaggcatgccaggtctaccagggaagccaggagaaagaggattaaatggtgagaaagga
gaagccggacctgttgggctcccaggagcaagagggccacaaggaccccctggtattcct
ggccccgcaggactgtctgtccctggaaagccaggaccacaaggacctccaggagctcaa
gggccaagaggcctccctggtgagaaaggagaaccaggtgttcctggtatgaatggacaa
aaaggagaaatgggatttggtgttccaggccgcccaggtagcaggggtcttccaggccca
cagggaccccaaggcctccctggccctgctgggataggaaagcctggagaaaatggcctt
ccaggtcagccaggtatgaaaggtgacagaggtctaccaggggcacgtggagaagctggt
accccaggcccccagggtccaccaggagaacgcggagaagttggcattggcaagcctggg
ccaatgggaccaccaggaccagcaggcatccctggagccaaaggattccctggacctgca
ggcttgcctggatccccaggtctcccaggatttggaaaaccaggattgccagggatgaag
ggacacagaggacctgaaggacctcctggctttccaggacctaaaggagaccaaggtcca
gctggtgtgccaggagaaccaggtcctgctgggtcaccaggaaatatgggccctcaagga
ctcaaaggcttgcctggtgagaatggcttacccggacccaaaggtgacatgggtcctgca
ggccctgcaggattcccaggagccaagggtgaaagaggtctaccaggattagatggaaaa
ccaggatacccaggtgagcagggtcctgctggtcctaagggacatccaggtctccctggt
caaaaaggtgacactggccatgctggcctgcctggcttgcctggtccagttggaccacaa
ggagttaagggagtgccaggtattaatggtgaacaaggcccaagaggaccttcaggaata
cctgggatcagaggccccattggtccccctggcatgccaggagcccctggtgcaaaaggt
gaaccaggagcaccaggactgccaggcccagcaggtattgctacaaaaggtttaagagga
cccatgggaccacctggacctcctgggcctaaaggcaacaatggagagcctggcttgcca
ggtcccccaggtcctcctggtccccctggccaagccacaatcccagaaggttatgttaaa
ggagagtctcgagagctatcaggaatgtctttcatgaaagcaggagcaaatcaagctctg
acaggaatgccagtgtctgccttcactgtcattctctcaaaagcctaccctggggcaaca
gtccccatcaaatttgacaaaatcctgtacaacagacagcaacactatgatcccaggaca
ggaatctttacctgcaggatccctggactatactacttctcctatcatgtacatgcaaaa
ggaacaaatgtttgggttgcactctataaaaatggcaccccagtcatgtacacttatgat
gaataccagaaaggataccttgaccaggcctctggcagtgctgtcattgatctcatggag
aatgatcaagtgtggctccagctaccaaattcagaatccaatggtctctattcctctgaa
tacgttcattcttctttctcaggtttcctatttgctcagatctaa
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