Tympanuchus pallidicinctus (lesser prairie-chicken): 128076616
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Entry
128076616 CDS
T08967
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128076616 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128076616 (HSPD1)
03110 Chaperones and folding catalysts [BR:
tpai03110
]
128076616 (HSPD1)
03029 Mitochondrial biogenesis [BR:
tpai03029
]
128076616 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpai04147
]
128076616 (HSPD1)
Enzymes [BR:
tpai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
128076616 (HSPD1)
Messenger RNA biogenesis [BR:
tpai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
128076616 (HSPD1)
Chaperones and folding catalysts [BR:
tpai03110
]
Heat shock proteins
HSP60 / Chaperonin
128076616 (HSPD1)
Mitochondrial biogenesis [BR:
tpai03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
128076616 (HSPD1)
Exosome [BR:
tpai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128076616 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
128076616 (HSPD1)
Exosomal proteins of breast cancer cells
128076616 (HSPD1)
Exosomal proteins of colorectal cancer cells
128076616 (HSPD1)
Exosomal proteins of bladder cancer cells
128076616 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
128076616
NCBI-ProteinID:
XP_052530428
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MLRLPAVLRHVRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKLSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANSHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLSLNVEDIQPHDFGKVGEVIVTKDDTMLLKG
KGEKAQIEKRIQEIIEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDALKPANEDQKIGIEIIKRTLKIPAMTIA
KNAGVEGSLIVEKILQSPSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEVPKEEKEPAMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcttgcccgcagtgctccgtcacgtcaggccggtgtccagagcgctcgccccg
cacctgacgcgggcgtacgcgaaggatgtgaagttcggtgcggacgcccgagccctcatg
ctgcagggagtggatctgctggcggatgctgtcgccgtcaccatggggccgaagggaaga
acagttattattgaacaaagctgggggagccccaaagtgacaaaagatggtgtgacagtg
gcaaaggcaatcgacttaaaagacaaatacaaaaacattggagccaagttggttcaagac
gttgccaataatacaaacgaagaggcaggagatggtactactactgcaacggtacttgca
cgtgctattgccaaagaaggctttgagaagatcagcaaaggagctaatccagtggaaatc
aggaggggggtgatgcttgcagttgatgctgttatagctgaactgaagaagctgtctaaa
ccagttacaactccagaagaaattgcacaggttgccacaatatcagcgaatggagatcag
gaaataggcaatataatttctgatgccatgaaaaaggtcggccggaaaggtgtaatcact
gtcaaggatggaaaaactctaaatgatgaattagaaatcattgaaggtatgaagtttgac
cgaggctacatctctccgtatttcattaatacagccaaagggcagaaatgtgaattccag
gatgcttacgttttaatcagtgaaaagaagatttccagtgtacagtccatagttccagct
cttgaaattgccaatagtcaccgcaaacctttggtcattattgctgaagatgttgatgga
gaagccctcagcactctagtcttgaacaggctcaaggttggtcttcaggttgttgctgta
aaagcaccaggttttggtgacaacaggaaaaaccagcttaaggatatggcaattgctaca
ggtggtgctgtgtttggagaggagggcttgagcctaaatgtagaagatattcagcctcat
gattttggaaaagttggagaggtgattgtgaccaaagatgacaccatgcttctaaagggg
aagggtgagaaggctcaaattgaaaaacgcattcaagaaattattgaacagctagaagtc
accacaagtgaatatgaaaaagagaaactgaatgaacgactggccaaactatctgatggg
gtagcagtattgaaggttggcggcacaagtgatgttgaagtaaatgagaagaaggacaga
gttactgatgccctgaacgcgacccgtgctgctgtagaggaaggcattgttccaggcggt
ggatgtgcattgcttcgctgcattccagcattagatgccttaaaaccagccaacgaggat
cagaaaattggcattgaaataattaagagaacactgaaaattccagcaatgactattgca
aagaatgcaggtgttgaaggatcattaatagttgaaaaaatactgcagagtccatcagaa
gttggctatgatgcaatgcttggggactttgtaaatatggtagaaaaaggaatcatagac
ccaacaaaggttgtgaggacggctctgatggatgctgcaggtgttgcttctctcttatca
acggcagaagcagtagtgactgaagttcctaaagaggaaaaagagccagcaatgggagga
atgggtgggatgggtggaggaatgggaggtggcatgttctaa
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