Tympanuchus pallidicinctus (lesser prairie-chicken): 128076685
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Entry
128076685 CDS
T08967
Symbol
ITGA6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04382
Cornified envelope formation
tpai04510
Focal adhesion
tpai04512
ECM-receptor interaction
tpai04514
Cell adhesion molecules
tpai04810
Regulation of actin cytoskeleton
tpai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128076685 (ITGA6)
04514 Cell adhesion molecules
128076685 (ITGA6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128076685 (ITGA6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128076685 (ITGA6)
04810 Regulation of actin cytoskeleton
128076685 (ITGA6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128076685 (ITGA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpai04147
]
128076685 (ITGA6)
04515 Cell adhesion molecules [BR:
tpai04515
]
128076685 (ITGA6)
04090 CD molecules [BR:
tpai04090
]
128076685 (ITGA6)
Exosome [BR:
tpai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128076685 (ITGA6)
Exosomal proteins of breast milk
128076685 (ITGA6)
Cell adhesion molecules [BR:
tpai04515
]
Integrins
Integrin alpha subunits
128076685 (ITGA6)
CD molecules [BR:
tpai04090
]
Proteins
128076685 (ITGA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
128076685
NCBI-ProteinID:
XP_052530590
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MAAALLLYLPLLPGLVGAFNLDAENVIGRRGEPGSLFGFSLAMHRQLQPQEKRLLLVGAP
REKAFPSQQANRTGGLYSCDITSSDTSCTRVVFDEDTDPKMESKEDQWMGVTVQSQGPGG
NVVTCAHRYEKRQYVNTVQETRDIIGRCYVLSQDLTIKDDMDNGVWSFCDGRLRGHEKFG
SCQQGVAATFTRDYHYIVFGAPGTYNWKGVVRAEQKNQTFYDLGIFDDGPYEVGDESRQD
KNLVPVPANSYLGFSLDSGKGIVSQDEMTFVSGAPRANHSGAVVLLKKEKNQRALTLEHM
FEGEGLASSFGYDVAVVDLNSDGWQDIVVGAPQYFDRSGDIGGAVYIYINQRGKWEGVKP
VRLNGTTDSMFGLAVENVGDINQDGYPDIAVGAPYDGFGKVYIYHGSKNGINTKPAQILD
GEKTGTNFFGYSIAGNMDLDKNSYPDIAVGSLSDSVSVFRSRPVISITKSITVQPDKLDL
KKKNSEDPSEIWMDVKACFQYTANPRNLNPRIKINYTFEAENERRQLGLPSRVRFKDYLS
DQFTASTTLMGQNSKQCVTAKLVLQEKIKDKLRPIPIAVSVNIAGLESGSSSTRKERALP
DLIPILNSNESETKITKVEFLKEGCGEDNECHSNLKLQYRFCTREGNEDRFTYLPIENGI
PVLVLKDQKDIALEITVTNNPSDARNPQKDGEDAYEAKLIATFPDSLTYSAFREMRGYPE
KQLTCGANQNGSQAECELGNPFKRNSNVTFYLILSTTKVNVDTTDLDINLKLETTSTQVN
STTITASAKVVLELLLSLTGVAKPSQVYFGGNIVGESAMKSEDNIGNLIEYEFRVTNLGR
PLKTFGTASLDIQWPKEISNGKWLLYLMKIDSKGLEKISCQPQNEINFLHVAESHNSRRK
REIAEKQITDSKTFSLFSERKYKTLDCKVNARCVDIKCPLKGFDSKASILLRSRLWNSTF
LEEYSKMNYLDILVRASISVPAAAKNVKLTNEAAQVRVTVFPAKPVALYTGVPWWIIAVA
IFAGVLMLALLVFLLWKCGFFQRSRYDDSVPRYHAVRIRKEEREIKDGKCKDLETKQWFT
KWNENESYS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgctcctcctctacctgcccctgctgccggggctggtcggcgccttcaac
ctggatgcggagaacgtgatcggccggcgcggggagccgggcagcctcttcggtttctcg
ctggccatgcaccggcagctgcagccgcaggagaaacggctattgctggttggagctcct
cgggaaaaggcctttccatcccaacaagccaacagaacaggagggctgtacagctgtgac
atcacatcttcagacacaagctgcacacgtgttgtgtttgatgaagacactgacccaaag
atggagagcaaagaagaccaatggatgggtgtaaccgtccaaagtcaggggccaggagga
aatgtggtgacatgtgcacatcgctatgagaaaaggcagtatgtaaacacagtgcaggaa
acccgggatatcattggaaggtgctacgtgctgagccaggatctcactattaaggacgat
atggacaacggagtgtggagtttctgtgacggtcgcttaagaggccatgagaagtttggc
tcctgtcaacaaggcgttgctgctacttttactagagactaccattacattgtgtttggc
gctccaggcacttacaattggaaaggggtggttcgtgcagagcaaaagaatcagacattt
tatgatctgggtatctttgatgatgggccttacgaagttggtgatgagagccgccaagat
aagaatctagttcctgttccagctaacagttatttaggtttctccttggactctggtaaa
ggaatcgtctcccaagatgagatgacttttgtgtctggtgcaccaagagccaaccatagt
ggagcagttgttctactgaaaaaagagaaaaatcagagggcgcttactctggagcacatg
tttgaaggagaagggctggcctcttcttttggttatgatgtggctgttgtggatctcaac
agtgatggatggcaagacattgttgttggagccccacagtacttcgatagaagtggagat
attggtggtgctgtgtacatctacattaaccagcgaggcaaatgggaaggagtaaaacct
gttcgcttaaatgggaccactgactcgatgtttggtcttgcagttgaaaatgtcggggac
attaatcaggacggatatccagatattgcagtaggagctccgtatgatggttttggcaaa
gtatatatttatcatggatccaagaatggaataaatacaaaacctgcacagattcttgat
ggtgaaaaaacaggcaccaatttctttggttactctattgctggaaacatggacctggat
aaaaattcctaccctgatattgctgttggttccctttcagattctgtatctgtgttcaga
tctcgacctgtcataagcattacaaaaagcattacagtacagcctgacaaacttgaccta
aagaaaaagaactctgaagaccccagtgaaatatggatggatgtgaaagcatgttttcag
tatactgcaaaccctcgtaatttaaatccaagaataaagatcaactatacatttgaagca
gaaaatgagaggagacaattaggcctgccatctagggtacggtttaaggactatctgtct
gatcagttcactgcaagtaccaccctgatggggcagaactccaaacaatgcgtgacagcc
aagcttgttctgcaggaaaaaattaaagataagctgcgcccaattcctatagcagtcagt
gttaatattgctggcctggagtctggctcatcatccaccagaaaagagagagctcttccg
gaccttataccaatactaaattcaaatgagtctgaaacaaagataacaaaggtggagttc
ttgaaagaaggatgtggagaagacaatgaatgtcacagcaatctgaaacttcagtaccgg
ttttgcactagagaaggaaatgaagacagatttacctatttgccaattgaaaacggcatt
ccagtgcttgttttaaaagatcagaaagatattgccctggaaataacagtgacgaataat
ccatctgatgcaagaaatccacagaaagatggagaagacgcatacgaagctaaactaatt
gcaacttttccagatagtctgacctattctgcattcagggagatgagaggatatcctgaa
aaacagctcacgtgtggtgctaaccaaaatggctctcaagcggagtgtgaacttggaaat
ccattcaagagaaattccaatgtaaccttttatctgatcttaagtaccactaaagtgaat
gttgatacaacagacttggacattaacctcaagctggagacaacaagcactcaagtaaac
tcaactacaattacagctagtgctaaagtggttcttgaactgcttttgtcactcactgga
gtggctaagccttctcaggtatattttggaggtaacattgttggtgagagtgctatgaaa
tctgaagataatattggaaacctcatagagtatgaattcagagtaaccaacttgggcagg
ccactgaaaacatttggtacagcttccctggacatccagtggccaaaagaaattagtaat
ggtaaatggctgctgtatctgatgaaaatagactccaagggcttggaaaagatttcctgt
caaccacagaatgaaatcaattttttgcacgttgcggaatcccataactcaagaagaaag
cgtgagattgcagagaagcagattacagacagcaaaacattttctttgttttcagaaaga
aaatataagaccttggactgcaaggtgaatgcacggtgtgtggacataaaatgtcctctg
aaaggttttgacagcaaggcatcgattttgctgcgttccagactgtggaacagtaccttc
ttggaagaatactccaaaatgaactacctggacattcttgttagagcctcaatcagtgtt
cctgctgcagctaagaatgtcaaactcacaaatgaagctgctcaggtgcgtgttacagtc
tttcctgcaaaaccagtagccctttatacaggagtgccttggtggatcatcgcagtggct
atttttgctggagtactgatgcttgcactcctagtattcttgttatggaagtgtgggttc
ttccagcgttccaggtacgatgacagtgtcccccgctatcatgctgtaagaattcgaaaa
gaagaacgagagatcaaagacgggaaatgcaaagatcttgaaacaaaacagtggttcaca
aaatggaatgagaatgaaagttattcttag
DBGET
integrated database retrieval system