Tympanuchus pallidicinctus (lesser prairie-chicken): 128077074
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Entry
128077074 CDS
T08967
Symbol
MBD5
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128077074 (MBD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128077074 (MBD5)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
128077074 (MBD5)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
128077074 (MBD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
128077074
NCBI-ProteinID:
XP_052531697
LinkDB
All DBs
Position
Unknown
AA seq
1748 aa
AA seq
DB search
MNGGKECDGGDTDGGPPAVQVPVGWQRRVDQSGVLYISPSGSLLSCLEQVKTYLLTDGTC
KCGLECPLVLPKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKIIAVATLHKSMEAPH
PSLVLTSPGGGTSATPVVPTRAATPRSMRNKSHEGITNSVMPECKTPFKLMIGASNAMGR
LYVQEMAGSQQQELHSVYPRQRLGSNELGQKSPYRGSHGGMPSPASSGSQIYGDGSISPR
TDPLGSPDVFTRNNPSFHGAPNSSPIHMNRTPLSPPSVMLHGSPIQSSCAMAGRTNIPLS
PTLTTKSPVMKKPMCNFSTGMEIPRAMFHHKPPQGPPPPPPPPSCALQKKPLTSEKDPLG
ILDPIPSKPVNQNPVIINPTTFHSNVHSQVPVMNVSMPPAVVPLPSNLPLPTVKPGHMNH
GSHVQRVQHSASTSLSPSPVTSPVHMMGSGIGRIEASPQRSRSSSTSSDHGNFLLPPVGP
QPSCTGIKVPPRSPRSTIGSPRPSMPSSPSTKHDGLNQYKDIPNPLIAGMSNVLNPPNNA
VFSTASAGSGSLKSQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNKLAGNNN
NSSSNSGPVASGGNNEGHSTLNTMFPPAANVLLPTTEGQSGRAALRDKLMSQQKDPLRKR
KQPTTTVLSLLRQSQLESSGVSKAGSDLVRKQSQSSFPISSMSQLLQSMSCQSSHMSSNS
TTSCGSSNTVLPCSGNQMHFADTGMNPGTLQNSLAQSLPLRGEGMHCQNTNTNFVHGTGP
ATTNHLAGLINQMQASGNCGMLSQSGMALGNSLHPNPPQPRIQASSTPVIPNSIASSCNQ
TSPEAGGSGPSSSIAIAGTSQPAITKTTSVLQDGVIVTTAAGNPLQSQLPIGGDFPFAGH
EHSLHFPQNSSSNNNLPPSLNQNLLSSLPISLPVNQQHLLSQNLLNILQPSAGEGKSEVN
LNPLGFLNPNVNAALAFLSSDVDGQVLQPVHFQLLATLLQNQAQAAAMLPLPSFNLTISD
LLQQQNNPLPSVTQMTAPPDHLPSNQSESNRVETLLSNPLGNPLPSFSGTDTTSNPLLLP
AVSGASALMALNPQLVGGVLNSASGNTANHPEVSIATSSQATTTTTTTSSAVAALSVSTL
GGGTAVVSMAETLLNISNNAGNTSGPAKLNSNSVVPQLLNPLLGTGLLGDMSSINTTLNN
HQLSHLQSLLNNNQMFPSNQQQQHLLQGYQNMQGFQGQPPIPGPANNPNPMACLFQNFQV
RMQEDAAALNKRMITQMGMAPVPESSNAMLPPFQETSCDLQQRTEPALGQQAKDNLNVAA
QGDTSVDAIYKAVVDAASKGMQVVITTAVSSTTQMSPIPALSAMSAFTASIGDPLNLSSA
VSAVIHGRNIAVSDHEGRIRNTRGTRVLKNSEHGKNSTEGDGYEYYKSTSCNTPKKQWEG
EQSPVSEINRWKCEEFLDHSTHIHSSPCHERPNNISTLPLLQGEQHQILLSQRNCQSDKM
LEENFRYNNYKRTMMSFKERLENTVERCAHINGNRPQQNRGYGELLNTSKQDLILEEQSP
SSSNSLESSLVKDYIHYNGDFNAKSINGCVPSPSDAKSISSEDDLRNPDSPSSNELIHYR
PRTFNVGDLVWGQIKGLTSWPGKLVREEDVHNSCQQNAEEGKVWVMWFGVHTFTQVEPEK
LKTLTEGLEAYNRARKRNRKSGKLNNHLEAAIHEAMSELDKMSGNVHQIPQGDRQVKPPK
PKRRKISR
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtggaaaggagtgtgacggaggggacacggatggagggccaccagcagtgcaa
gttcccgttggttggcagcgacgggtggaccaaagtggagtgctctatatcagtcccagt
gggtctttattatcctgcttggagcaggtgaagacttacttgctgactgatggaacctgc
aaatgtggcctagaatgtcctcttgttcttcccaaggtctttaattttgatcctggagct
gctgtgaagcagagaactgctgaagatgttaaagcagatgaggatgtcaccaaactatgc
atacataaaagaaaaattattgctgtggctacacttcataaaagcatggaagcaccacat
ccttcactagttctaactagtcctggtggtggaacaagtgcaactccggtagttcctact
cgagcagcaactccaagatcaatgaggaataaatcacatgaaggaattacaaattctgtg
atgccagaatgtaagactcctttcaagttgatgataggggcatctaatgccatgggtagg
ctttatgtgcaagaaatggctggaagccagcaacaagaacttcattctgtctatcctagg
cagagattgggtagtaatgaacttggacagaagtctccatatcgtggcagtcatggtggg
atgcccagtccagcttcatcaggatcacagatatatggagacggctcaatctctcctagg
actgacccacttggaagccctgatgttttcacaaggaacaatcccagttttcatggagca
cccaactcaagtcctattcatatgaacaggacacctctgtctccgccatcagtaatgcta
catggttctcccatacagtcatcctgtgcaatggctggaaggactaatatacctctttcc
ccaaccttgaccacaaaaagccctgtaatgaaaaaacccatgtgtaatttttcaactggt
atggaaataccacgagcaatgtttcaccataaaccaccccaaggtccacctcctcctcct
ccaccgccttcttgtgctcttcagaaaaagccattaacatcagaaaaggatccacttggc
atacttgaccctattcctagcaaaccagtcaatcagaatcctgttatcattaacccaact
actttccattcaaatgtccactctcaggtacccgtgatgaatgtaagcatgcctcctgct
gtcgtccctttgccaagtaatcttcctttgccaactgtaaaacctggtcacatgaaccat
ggaagtcatgttcaaagagttcagcattcagcttctacttccctatctccttcaccagtg
acatccccagttcacatgatgggatccgggattggaaggatagaggcttctccccaaaga
tcacgttcttcttccacatcatcagaccatggaaatttcctgctgcctccagtaggaccg
cagccatcctgtactggtattaaagttcctcccaggtccccacggtcaacaatagggtcg
ccaagaccatctatgccatctagcccctccaccaagcatgatggacttaatcaatacaag
gacatccctaacccattaattgctggaatgagtaatgtattaaatcctccaaacaatgca
gttttttccactgcatcggctggaagtggttctttgaagagtcagcctggtttgctggga
atgcctttaaatcagatcttgaaccagcacaatgctgcctcttttccagcaagtagttta
ctctcagcagcagccaaagcacagctagcaaatcaaaataaacttgctggtaacaacaat
aacagcagtagcaattctggacctgttgccagcggtggcaacaacgaaggacatagcact
ttaaataccatgttccctcctgctgccaatgtgcttctaccaacgactgaagggcaaagt
ggtcgagcagcactgagagataaattgatgtctcagcaaaaagatcctctgagaaaacga
aagcagccaaccaccacagtgttgagtttgctgagacagtctcagttggagagttctgga
gtttccaaagctggatctgatttagtaagaaagcaaagtcaaagctcttttcccatcagc
tctatgtcccagttacttcagtccatgagttgtcaaagctctcacatgagcagcaatagt
actaccagctgtgggagctcaaatactgttttaccttgctctggtaaccagatgcatttt
gcagacaccggtatgaaccctggcactcttcagaactcactggcacagagtttaccgtta
cgaggggaaggtatgcactgccagaacacaaacactaactttgtccacggtactggccct
gccaccaccaaccatctcgcaggtttaataaatcagatgcaggctagcgggaactgtggg
atgctcagtcagtcaggaatggctttaggaaattcattacatccgaacccacctcagcca
agaatccaggcatcctccactccagtgataccaaacagcattgctagcagctgtaatcaa
acaagtcctgaagcagggggttcgggaccatcatcatcaatagccatagctggcaccagc
caacctgccatcaccaagacaacatctgttcttcaagatggtgttatagtcactactgca
gctggaaacccacttcagagccagctgcccattgggggtgatttccctttcgctggccac
gaacactcgcttcatttcccgcagaacagctcttcaaacaacaatcttccaccttctttg
aatcaaaacctcctcagttctctacctatctctttgccagtgaatcagcaacatctccta
agccagaatctattaaatatactgcagccttcagcaggagaaggcaagtctgaggtcaac
ctcaaccctttaggttttctcaacccgaatgtaaatgctgctttagcttttctctccagt
gacgtggatgggcaggtattacagcctgttcattttcagcttctagcaaccctcctccag
aaccaagcccaagcagctgccatgcttcccctaccatctttcaatctgaccatctcagat
ttgttgcaacagcaaaataaccctttgccctcagtaacacagatgacagccccacctgac
catttgccaagcaatcagtcagaaagcaacagggttgagacccttttaagcaaccccttg
gggaaccctttaccaagcttttcaggcactgacactacttctaaccccctgctcctccca
gctgtctctggggcctcagcattaatggccttgaatccccagctggtgggaggtgtcctg
aactccgcatcgggcaacactgctaatcatccagaggtttccatagccacctcctcccaa
gcaaccactaccacaaccactacatcatcagcagtggcagcactgtctgtctctaccctg
ggtggtgggacagcagtggtgtcaatggcagaaacattgctgaacatatctaataatgct
gggaatacatctggtccagctaaactcaacagtaactctgtggtgccacagctacttaac
cctctactggggacaggtctgcttggtgacatgtcatctataaacactactttgaataac
catcaactgagtcatctccagtcactattaaacaacaatcagatgtttccttcaaatcag
cagcaacagcaccttctccaggggtatcagaacatgcagggctttcaaggccagccccca
attcctggcccagccaacaaccccaaccccatggcatgtctgttccaaaatttccaggtg
agaatgcaggaagatgctgctgccctaaacaaaagaatgatcactcagatgggaatggca
ccggttcctgagagctccaacgctatgcttcctcctttccaagaaacatcttgtgatttg
cagcaaagaactgaaccagctcttggtcaacaggcaaaggataacctcaatgtcgctgct
cagggtgatacatcagtggatgcgatctacaaagcagtcgtagatgctgcaagcaaggga
atgcaagtagtgatcaccactgctgttagcagtaccacacaaatgagtcccattccagct
ttgagtgccatgagtgccttcacagcctcaattggtgacccgctaaatctctctagtgct
gtcagtgcagtaatccatggaagaaacattgctgtttctgatcacgaaggtaggataagg
aacactagaggaacgcgagtgctgaagaattcagagcatggtaaaaattcaactgaaggg
gatgggtatgaatattacaaatcaacaagttgtaacacacccaaaaaacagtgggaaggg
gagcaaagtcctgtcagtgagataaataggtggaaatgtgaggagtttctagaccactcc
acccatatccatagtagtccttgtcacgaaaggcccaataacatctccacactgccatta
ttgcaaggcgagcagcatcagatactgttatcacagcgaaactgtcaaagtgataaaatg
ttggaggagaatttcaggtataacaattacaaaagaactatgatgagttttaaggaaaga
ctggagaacactgtggaacgatgtgcacacataaatggaaataggcctcagcagaacagg
ggatacggggagttgctgaacacttctaagcaagacctgattctggaagagcaatctccg
agttcctcaaatagtttggaaagttcgttagttaaagactacatccattacaatggagat
tttaatgccaaaagcattaatgggtgtgtgcctagcccttcggatgctaaaagcatcagt
agtgaagatgacctaaggaatccagattccccttcttccaatgagctgatacattacagg
ccgaggacgtttaatgttggcgacttggtctggggccaaatcaaaggactgacttcatgg
cctggaaagctagtaagagaagaagacgttcacaattcatgtcaacaaaacgctgaggag
gggaaggtctgggtaatgtggtttggtgttcataccttcactcaggtggagccagagaag
ttgaagacactaacagaaggtctagaagcttacaaccgagccaggaaaaggaacagaaaa
agtggaaagctaaataaccatttagaagctgctatacatgaggccatgagtgaactagac
aaaatgtctgggaatgtccaccaaatcccacagggagacagacaagtgaagcctccaaaa
cccaagaggaggaagatctctagataa
DBGET
integrated database retrieval system
