Tympanuchus pallidicinctus (lesser prairie-chicken): 128077202
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Entry
128077202 CDS
T08967
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128077202 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128077202 (POLR1B)
Enzymes [BR:
tpai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128077202 (POLR1B)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
128077202 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
128077202
NCBI-ProteinID:
XP_052531994
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MAAAMGESTSREPHRLRRRQRPRGGVRRDLPAAHIESFNYAISEGVYRALQDIPPVELAL
KDGRVALTVVGIAISPPVVPKGTLCQEVKVFPAECRGLRSTYRGRLTVDISWSLNGIPQG
TIKQPVGYIPIMVKSKLCNLYNLSPQELIQHHEEEEEMGGYFIINGLEKVIRMLIMPRRN
FPLAMTRHKWKNRGPGFTEYGVVLHCVKDEHSAINMNLHYLENGCVMVNFIFQKELFFLP
LGFALKALVNFTDYQIFEELVKDKKNDTFYVNCVTEMLRAVAEAGCYTQQNVLEYLGKSF
RVKLNLPEWYSNEQAADFIFNKCICIHLTDRTEKFYLLCMMTRKLYAFAKGECMEDNPDS
LMNQEVLTAGQLFLMFLKERLENWLQSVKFILEKRTEKADISVNTDSLMKAFSLTTDVTK
SFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFVRYLSHFRCIHRGSAFAQMRTTTVRK
LLPESWGFLCPVDTPDGEPCGLMNHMTAVCEIVTEMVPATDLPPLLCALGVVPIDATPSK
PYAECYRVVLDGAVVGWVEWDLAPQVAEALRRFKITQEKRFPARAEVVLIPMTGKPSLYP
GLFIFTTPCRMVRPVKNLLYGRKEWIGTLEQVFMNVATMESDIVPGVTTHQELFPHSILS
VVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYLLHTPQSPLVRPRMYD
YYGMDSYPVGTNSVVAVISYSGYDMEDAMIVNKSSWERGFAYGSVIKMESIDLSLKASRG
GDNLVFGIRPGDPNIKEKLDADGLPFVGSILQPGDPFYSYMNLNTGETFTVYYQNKEVGI
VDNIKLCSNDRGTGKFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPFTENG
MVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGAYYDATPFTFTEKNSALKYFGETLVS
AGYNFFGTEKMYSGISGVELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDSVTNQPVKG
RNVEGGIRFGEMERDALLAHGTSFLLHDRLFSCSDGSEAYVCTSCGSMLSPLLQRPPPSS
VASNRRYSCMLCGRMDTIQVIPVPHVFRYFLAELAAMNIKLKLTLEQ
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccatgggggagagcacgtctcgggagccgcaccgcttgcgacggcggcag
cggcctcgcggcggggtacggcgcgacctgcccgccgcccacatcgagtccttcaactac
gccatcagcgagggggtgtaccgcgcactgcaggacatcccgccggtggagctggcgctg
aaggacggccgcgtggcgctcaccgtggttgggatcgccatctcgccgcccgtggtgccc
aaggggacgctgtgccaggaggtgaaggtgttcccggccgagtgccgcgggctgcgcagc
acctaccgcgggcggctcacggttgacatcagctggtcactgaatggcattccacaaggg
actattaaacagcctgtagggtatattccaatcatggtgaagtccaaattgtgtaacctc
tataatctttctccccaagagctcatccagcaccatgaggaggaggaggaaatggggggc
tacttcataattaatggcttagagaaagtaattagaatgctgattatgcccaggcgcaat
ttccctcttgcgatgacaagacacaagtggaaaaacagaggtcctggtttcacagagtac
ggggtagtgctgcactgtgttaaagatgagcacagtgcaataaacatgaaccttcactac
ctggaaaacggctgcgtaatggtgaacttcatttttcagaaagaactgttcttccttccc
ttgggatttgctctaaaggcattagttaatttcacagactaccagatttttgaagagctg
gtcaaagacaagaaaaacgacaccttttatgtgaactgcgttacggagatgctaagagca
gtagctgaagcaggttgttacacgcagcaaaacgtcctcgaataccttgggaagagcttc
agagtaaaactcaaccttcctgagtggtacagcaatgaacaggctgcagatttcattttc
aacaagtgtatctgcatacacttgacagacagaactgaaaaattctacctgctttgtatg
atgacccggaagctgtatgcttttgccaaaggggagtgcatggaggataatccagacagt
ctgatgaatcaagaagtgcttactgcaggacagcttttccttatgttcctaaaggagagg
cttgagaactggttgcaatctgttaaattcattttggagaagagaacagaaaaggccgac
atcagcgtcaatacagacagcctgatgaaggcattcagcctgaccacagatgttaccaag
tcatttgagtaccttctagcaactggtaacctgcgatctaagaccggcctgggcatgctg
caggacagcggtctgtgtgtggtgggggacaagctgaattttgttcgctacctttcgcat
ttccgctgcatacacagagggtcggcgtttgcccagatgagaactaccacggtacgcaaa
ctgctgccggagtcctgggggttcctgtgcccagtggacacccctgatggagagccctgc
ggtctgatgaaccacatgacagctgtgtgtgaaatagtgacagagatggttcctgcgaca
gacctgccacctctgttatgtgctctaggtgttgtccccattgatgcgaccccaagcaag
ccgtacgctgagtgctaccgcgtggtgctggacggtgcagtggtgggctgggtcgagtgg
gacctggctcctcaggttgcagaagccctccggcgattcaagataacacaagagaagaga
tttcctgcgcgggcagaagtggtccttatcccaatgacaggaaaacccagtctgtatcct
gggttgttcatcttcactaccccttgtcgaatggtgcggcctgtcaaaaacctgctgtat
ggaaggaaggaatggattggtacactggaacaggtcttcatgaatgtggccaccatggag
tcagacattgtgcctggagtcaccacccaccaggagctcttccctcacagcattctgagt
gtggtggccaacctcatccccttctctgaccacaaccaaagtcctcgaaacatgtaccag
tgccagatgggaaagcaaaccatggggtttccagtgtataactacaaggaccgctcagat
aacaagttgtacctcctccatacccctcagagccctctggtgaggcccagaatgtatgac
tattatggtatggacagctacccagtcggtaccaattcagttgtggctgtcatctcctat
agtggctatgacatggaagatgcaatgattgtgaacaaatcttcttgggagagagggttt
gcttacggaagtgttatcaagatggagagcattgacctttcccttaaagctagcagggga
ggtgataatttagtatttggtatcaggcctggggacccaaacattaaggagaagttggat
gctgatggactgccttttgttggctccatcctgcagcccggggacccgttctacagctac
atgaaccttaacacaggagagaccttcactgtgtactaccagaataaagaagtaggcatt
gtggacaacatcaagctgtgcagtaatgaccgtggcactgggaaattcaagaaggcttgc
atcactgtgagagttcctcgaaacccaactgttggagacaaatttgccagccgccatggg
cagaagggcatcctgagccagctctggcctgttgaagacatgccattcacggagaatggg
atggttccagacatcctcttcaacccccatgggttcccctcccgtatgaccatcgggatg
ttaattgagagcatggcggggaagtcagcagcgctgcacggcgcctactacgatgccact
cccttcaccttcacggagaaaaactctgccttgaagtactttggtgagactttggtgagc
gcgggctataacttctttgggacagaaaagatgtacagcggaatcagcggcgtggagctg
gaggcagacatctttgtgggagtcgtgtactaccagcgcctgcgccacatggtctcagac
aagttccaggtgaggactacaggaccccgggattctgtcaccaaccagcccgtcaagggg
aggaacgtggaaggggggattcgctttggtgagatggagcgtgatgcgctcttggctcat
ggcacctccttcctgctgcacgaccgcctgttcagctgctccgatggctcagaagcctat
gtttgcacgagctgcggcagcatgttatctcctctgctccagcgcccaccaccttcctct
gtagcaagcaacaggaggtattcctgcatgctctgtggcaggatggacaccatccaggtc
atccccgtgccccacgtcttccggtacttcttggcagagctggcagccatgaacatcaag
ctaaagctcacgctggagcagtaa
DBGET
integrated database retrieval system
