Tympanuchus pallidicinctus (lesser prairie-chicken): 128077229
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Entry
128077229 CDS
T08967
Symbol
ITGB5
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-5
KO
K06588
integrin beta 5
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04145
Phagosome
tpai04148
Efferocytosis
tpai04510
Focal adhesion
tpai04512
ECM-receptor interaction
tpai04810
Regulation of actin cytoskeleton
tpai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128077229 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128077229 (ITGB5)
04148 Efferocytosis
128077229 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128077229 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128077229 (ITGB5)
04810 Regulation of actin cytoskeleton
128077229 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128077229 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128077229 (ITGB5)
Membrane trafficking [BR:
tpai04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128077229 (ITGB5)
Cell adhesion molecules [BR:
tpai04515
]
Integrins
Integrin beta subunits
128077229 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
I-EGF_1
EGF_integrin
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
128077229
NCBI-ProteinID:
XP_052532049
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MDAVCVAKVAEAGXCHVTGGSELEGMRASPAASRRGDRCARAADACVHICVCTWLCPGVT
VCITEXLELAGTLKTIWFQLCTELPPTTCLCLCVCACVSASSTRRCACINPSVHARVYTF
ARGCLHVHARHAHVCTHMRARTYTFTPARPLAQPRTRARAIPRRPAPLPSSGLRLPAPYP
GPSAAERRHQRRADPGRSPSPAPGSPSAAPAASSSSSSSSSSSSSSSSSSSSTAAAAAAA
AAQKAAGREGGPAGRAASAARTMPRRGGLPAPAAARRPPPLLRLLLRLLLLAAPLQPGRG
LNLCTSGSASSCEECLLIHPKCAWCSKEEFGSTKSVPSRCDFLQNLIANGCAGAIENPRS
SSSVMKNIPLSSKGSGQSHLDVTQITPQKVTLSLRPGDRTSFRVQVRQVEDYPVDLYYLM
DLSLSMNDDLDNIRNLGTKLAEEMRKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCIG
YKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKIG
WRKEASHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLGE
KLAENNIHLIFAVTKSHYVLYKNFTALIPGTTVEILHKDSKNIIELIVKAYNSIRSKVEL
TVWDSPEDIGLTFTATCQDGLSYPGLRKCGDLKIGDTVSFEVSVEARGCPAEDTSHVFTI
KPAGFRDTLEVNVTYNCLCGCTGHAEPSSSKCSSNGTYACGLCECDAGYLGARCECEEGA
GGETQPGLCREVEGKPVCSGRGECSCNQCVCYESEFGNIYGPFCECDDFSCARYKGVLCS
GHGECHCGECKCHTGYIGDNCNCSTETAGCVSSDGQMCSGRGNCICGRCQCTEPGAFGET
CEKCPTCPGVCSTKRDCIECKLFNSGRLDNQTCQKHCKDELITTVDVLKTDDPNAILCAY
PVNNCVMKFTYSELANGKSNLTVLKEPACSSAPSAVTIVLAVIGSVVLIGTILLGLWKLL
VTIHDRREFDRFQSERTRARYEMASNPLYRKPISTHNVEFTFNKLNKSYNGTVD
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgtttgtgtggcaaaagtcgctgaagcaggataatgccacgtaacagggggc
agtgaactggagggaatgcgtgccagcccggcagcaagcaggcgcggagatcggtgtgcc
cgtgctgcagatgcttgtgtgcatatatgtgtgtgcacgtggctgtgtccgggtgtgaca
gtgtgcatcacagaatgacttgagttagcagggaccttaaagaccatctggttccagctg
tgcacagagctgccacccactacatgcctgtgcctctgcgtgtgtgcatgcgtctctgcg
agctccacacggaggtgtgcgtgcatcaacccgagcgtacatgcacgcgtgtatacattt
gcacgtggatgcctgcacgtgcatgcgcgacacgcgcacgtgtgcacgcacatgcgagca
cgcacgtacacatttacaccagcgcggccccttgcacaaccacgcacacgagcccgtgcg
atcccccgccgccccgctccgctccccagctccgggctccgcctccccgctccgtacccc
ggcccgagcgcggccgagcgacggcaccagcggcgggcggaccccggccgctccccgtca
cccgccccgggcagtcccagcgccgcccccgccgcctcctcctcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctcctcctcctccaccgccgccgccgccgctgctgcg
gccgcacaaaaggcggcggggagggagggaggcccggcgggaagggcagcctcggccgcc
cgcaccatgccccgccgaggggggctgccggcccccgccgccgcccgccggccccccccg
ctcctccgcctcctcctccgcctcctcctcctggccgccccgctgcagcccggcagaggt
ctcaacctgtgcacgagtggaagtgcctcatcctgcgaagagtgtctcctcatccatccc
aagtgtgcttggtgctccaaagaggagtttggcagcacgaagtccgtcccatcgcggtgt
gacttcctgcagaacctcattgccaacggttgtgccggcgccatcgagaacccacgcagc
agcagcagcgtgatgaagaacatccccttaagcagcaagggctctgggcaaagccatctg
gatgtcacacagatcactccgcagaaggtcaccctgagtcttcgtcctggtgacaggacc
tccttccgagttcaggtccggcaagtggaggactatcctgtggacctgtactacctgatg
gatctctccctgtccatgaatgacgacctggacaatattcgcaatctggggacaaagctg
gctgaagagatgcggaagctcactagcaatttccggctgggctttggctcttttgtggac
aaaaacatttctcctttctcctacacagcaccgagataccaaaacaatccctgcattggg
tataagctgttcccgagctgtgtcccttcatttggtttccgccatctcttgtccctgacg
gacaaagtcgaccgtttcaatgaagaagtgcagaagcagaaggtgtcccggaaccgggat
gcaccagagggtggttttgatgcaattttgcaggctgctgtgtgcaaggagaagatcggc
tggcggaaggaagcatcccacctgctggtcttcaccacggatgatgtgccccacatagct
ctggatgggaagctgggggggctggtgcagccccacgatggccagtgccacctgaacgag
gccaatgagtacagcgcgtccagccagctggattatccttccctggcactccttggggag
aaactggctgaaaacaacatccacctgatttttgctgttacaaaaagccattatgtcctg
tacaagaacttcactgccttgattcctgggaccacggtggagattttgcacaaggactcc
aagaatatcatcgagctgattgtcaaggcctacaacagcattcgatccaaagtagaactc
actgtctgggacagccctgaggacattggcttgaccttcactgccacctgccaggatgga
ttgtcctaccctgggctcagaaaatgtggggatctcaagataggagatacggtttccttt
gaggtgtcggtggaggcccgtggctgccctgctgaggacacctcccatgtcttcaccatc
aagccagctggcttccgtgatacactggaagtgaacgtcacctacaactgcctctgcggc
tgcaccggtcatgcggagccatccagcagcaagtgcagcagcaatgggacctatgcctgc
gggctgtgcgagtgcgatgccggctacctgggggcccgctgcgagtgtgaggagggggcc
ggcggggagacccagcctgggctgtgccgtgaggtggagggaaagcccgtctgcagcggg
cggggggagtgcagctgcaaccagtgtgtgtgctatgagagcgagttcgggaacatctac
gggcccttctgtgagtgtgacgacttctcctgcgcccgatacaagggagtcctctgctca
ggccatggggagtgtcactgtggggagtgcaagtgccacacgggctacatcggggacaac
tgcaactgttccaccgagaccgccggctgcgtctccagcgatgggcagatgtgcagcggc
cgcggcaactgcatctgtgggaggtgccagtgcaccgagcctggggcgttcggggagacc
tgtgagaagtgtcccacctgcccaggggtctgcagcaccaaaagggactgcattgaatgc
aagctgtttaactcaggaagactggataaccaaacctgccaaaagcactgcaaggatgag
ctcatcaccactgtggatgttctcaaaacggatgaccccaatgcaatcctgtgtgcctac
ccggtgaacaactgtgtcatgaagttcacctactcggagcttgccaatgggaagtccaac
ctcaccgtcctcaaggagccagcatgcagctcagcccccagtgctgtgaccatcgtgctg
gctgtcattggcagcgtggtgctgattggcaccatcctgctgggtctctggaagctgctc
gtcaccattcatgacaggagggagtttgaccgattccagagcgaacgcacccgggcgaga
tatgaaatggcatccaatcctctctaccgaaagcccatttctacgcataatgtagagttc
acattcaacaagctcaacaaatcttacaatggtacagttgactga
DBGET
integrated database retrieval system
