Tympanuchus pallidicinctus (lesser prairie-chicken): 128077372
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Entry
128077372 CDS
T08967
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128077372 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128077372 (XRCC5)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
128077372 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
DUF6005
Motif
Other DBs
NCBI-GeneID:
128077372
NCBI-ProteinID:
XP_052532481
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MKAKHIAKTTVTNVAFWNKPRTSRGEKGAPRPTFSSPLTSQQPSAPSPHKRSAEPRWRPA
SPLLFLQLRSRSPCRWVALPGLQAPAGALIAAHRGAGKMARGGKSAIVLCLDVGITMSSS
SAPGEESPLEQAKRVMTKFLQRQVFAESKDEVAVVLFGTDGTKNNLASRDQYQNITVHRS
LMLPDFDLLEDIQNTIQLGSEQADFLDAIIVCMDLLQQETLGKKFEKRHIELFTDLSSPV
SEDQLEIIVANLKKTGTSLQFFLPFPVDGADGHGDASANSQLHQNSFPRKRLTAQQKEGI
DVVKKLMHTLDEEGGLEEIYTFRESLEHLAMFKKIERRPVPWSCQLTIGSNLSIRIVAYK
ALTEEKVKKIWTVVDAKTLRKEDVQRETVYCLNDDDETEVQKDDTIQGFRYGSDIIPFSK
EDEEQMKYKTEAKCFSVLGFSRSSQIQRHCYMGNQVLKVFAAKDDENAAVAFSALVQALD
ELNVVAIVRYAYDRRCNPQIGVAFPCIKDAYECLFYVQLPYMEDVRQYMFSSLKNNKKCS
PTVDQLSAIDSLIDSMNLVYEDDDGETFEDLFKPSKIPNPHFQRLYQCLQHKAFHPNEPL
PPIEQHLLEMLEVPCVVKERCKAPLEKVKALFPLKDAGKKKEEKTAQDIFKDDEDGPNAK
RRKTEDEEDSFSIMKLAEGNVTSVGSVNPAEDFRILVRQKNADFKDVSQQLINRIDQFLE
NRSSQYYMKGINCIRVFRGEAMKLSKVQCFNDFLQALKSKVEDKALTDFWEIVVQDRISL
ITKDEAEGSSVTSEEAEKFLTPKEKKNETLPATDEGGDVDDLVSTIKTGCGFRTQF
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgaagcacatcgctaaaaccacggttacaaacgtggcgttttggaacaagccg
cggacttcccgaggagaaaaaggagcgccacgccccaccttttcttccccactcacttcc
cagcagccttcggctccatctccacacaagcgcagcgcggaaccgagatggcgccccgcc
tctcctctcctcttccttcagctccgctcgcgctctccgtgccgctgggtggcgctgccc
ggactccaggcgccagccggagcgctgatagcggcgcaccgcggcgctggcaagatggcg
cgcggcggcaagtcagccatagtgctgtgcctggacgtaggcatcacgatgagcagcagt
tcggctcctggggaggagtctccactggaacaagccaagagggttatgaccaagtttctg
cagcgacaggtttttgctgagagtaaagatgaagttgctgtagttctgtttggcacagat
ggtacaaagaataacctcgccagtagggatcaataccaaaacatcactgtacatagatct
ctaatgctgccagattttgacttgctggaagacattcaaaatacaattcagctaggctct
gaacaagcagactttctggatgcaattattgtgtgtatggacttgcttcagcaggaaaca
ttaggaaagaaatttgagaagagacatattgaactgtttacggaccttagtagtcctgtc
agtgaggatcagctggaaattatcgttgctaacttgaagaaaacaggaacttcactccaa
ttttttttaccatttccagtggatggtgctgatggacatggagatgcaagtgccaactcg
cagttgcaccaaaactcattcccaagaaagaggttaactgcgcagcaaaaggaaggcatt
gatgtggtgaagaagttgatgcatactttggatgaagaaggagggctggaagaaatttac
actttcagagagagcctggaacatcttgcaatgtttaagaaaatagaaagaagacctgta
ccttggtcatgccagttaactattggttccaatttgtctataaggattgtggcctacaaa
gcactcacagaagagaaggtgaaaaaaatttggacagttgtggatgctaaaaccctcaga
aaagaagatgtgcagagagaaaccgtttactgtttaaatgatgatgatgagacagaggtt
cagaaagatgatactatccaagggtttcgctatgggagcgatataattcctttttccaaa
gaagatgaagagcaaatgaaatacaaaactgaagcaaaatgtttttctgttctgggattc
agcagatcatctcagatccagaggcactgttacatgggcaaccaggttctcaaggtcttt
gcagcgaaagacgatgagaatgcagcagttgctttttctgcccttgttcaagcattggat
gagctgaatgtagtagctatagtgcgttatgcttacgataggagatgtaacccacaaatt
ggtgtagcttttccatgcattaaggatgcgtatgagtgtctcttctatgttcaactaccg
tacatggaggatgtaagacagtacatgttttcatctttgaaaaacaataagaaatgctct
cctactgtggatcagttatctgcgattgactccttgattgattctatgaatttggtttat
gaagatgatgatggagaaacttttgaggacctgtttaagccgagcaaaatcccaaaccct
cattttcaaaggttatatcagtgtttgcagcataaggcttttcaccccaatgagccattg
ccaccaattgaacaacaccttttggaaatgctggaggtgccctgtgtggtaaaagaaagg
tgtaaggctccacttgaaaaagtaaaggcacttttccctctaaaagatgctggcaagaaa
aaagaagagaagactgctcaagatatctttaaagatgatgaagatggacccaatgctaag
agaagaaaaactgaagatgaggaagatagctttagcatcatgaaacttgctgaaggcaat
gtcacctctgttggcagcgttaacccagcagaagacttccgaattctggtgaggcagaaa
aatgctgacttcaaagatgtgagtcagcagctgataaaccgcattgatcagtttttggaa
aacagaagctcacagtactacatgaaagggatcaattgcattagagttttcagaggggag
gctatgaagctatccaaggtgcagtgctttaatgattttctgcaggccttgaagtcaaag
gtggaagataaagccttaactgatttctgggagattgtggtacaagacagaatttctttg
atcactaaagatgaagcagagggaagttctgtgactagtgaagaagctgaaaagttcttg
actccaaaagaaaagaaaaatgaaactctgcctgccacagatgaaggtggtgatgttgac
gatttggtgagtaccataaagacaggatgtggctttagaactcaattttaa
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