Tympanuchus pallidicinctus (lesser prairie-chicken): 128077434
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Entry
128077434 CDS
T08967
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128077434 (BTAF1)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128077434 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_2
TOR1L1_N
Vac14_Fab1_bd
TPR_Trm732_C
ARM_ECM29
Arm
Motif
Other DBs
NCBI-GeneID:
128077434
NCBI-ProteinID:
XP_052532530
LinkDB
All DBs
Position
Unknown
AA seq
1844 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLVYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPTPRSKQEPGSESPMEDSPSTDRLRFDRFDICRLLKHGASLLG
SAGAEFEVQDDKSGEIDPKERIARQRKLLQKKLGLDMGAAIGMNTEDLFNDEDLDYSPSS
VSLVNKQPTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRDAVEANEKSNDSTDG
EPEEKRRKVASVVINQPATDSKTLVENASEEANEWPLESFCEEVCNDLFNPSWEVRHGAG
TGLREILKAHGKSGGKMGDSSLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAP
VRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQDMIDT
LLPKVLPAIVEGLQDLDDDVRAVAAASLVPVVESLVHLQSQKVPFILNTLWDALLELDDL
TASTNSIMILLSSLLTYPQVRKCSIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLS
TQDQSSSTWLTPILQDMLRHIFQFCILESNQEILDLIHKVWLELLNKASVQYVVAAACPW
MGAWLCLMMQPSHLPIDLNMLLEVKTRSKEKAAAKLRQGQTQNKEVIQEYIAGADSIAED
PATRDYVVMRARMMAAKLLGALCCCICDPGVNAVTQEIKPAESLAQLLLFHLNSKSALQR
ISVALVICEWAALQKECRTVAICVQPCLLGVLSEHLYYDEIAVPFTRMQNECKQLISLLA
DAHIDIGNRINCSVFTIDQANDLVTSVFNEVTSSFTLNPKILQQLDSKRQQVQMTVTETN
QEWQVLHLRVHTFAACAVVNLQQLPEKLNPVIKPLMEAIRKEENTLVQNYVASCIAKLLQ
QCTTRSPCPNSKIIKNLCNSLCVDPHLTPLAACPAQPQSGNENSKGPNSDKDGMHHTVTK
HRGIITLYRHQKAAFAITSRRGPAPKAPKAPIADLPTGSSGSIPTELDEAQKPYVVQRRG
AEFALSTIAKHFGAEMAKGLPHLWDAMVGSLRNNIHINNFDRKSLLEKGDAPAQELVNSL
QVFEITAASMDIQLHPLLIEHLPHLCMCLQHPSTAVRHMAARCVGVMSKIATMETMNIFL
EQVLPWLGAIDDNTKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMA
TQCFATLIRLMPLEAGIPDPPNMSEELIRMKAKERHFLEQLLDGKKLENYKIPVPIKAEL
RKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQEYARTKLVDSVP
LPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQYQVKRHNLIVASYDVV
RNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSL
FDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKE
DVLQDLPPKIIQDYYCVLSPLQVQLYEDFAKSRAKCDIDETVSSISLREETEKPKLKATG
HVFQALQYLRKLCNHPALVLTTQHPEYKRITEQLAAHNSSLRDIQHAPKLSALKQLLLDC
GLGNGGSSESGTEAVVAQHRILIFCQLKSMLDIVEHDLLKPQLPSVTYLRLDGSIPAGQR
HSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQK
RVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTEQLLDLFTLDKDGKT
EKPDTSTSSGKASMKSVLENLGELWDQEQYDTEYSLENFMHSLK
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctccaggcttgatcgtctctttattttgttggacaccggtacaacaccagtg
acaagaaaagcagctgcacagcaactcggggaagtagtgaaactgcaccctcatgaactg
aacaatctcttatctaaagtgttagtatatttaagaagcacaaattgggatacccgtatt
gcagctggccaggctgttgaagcaatagtgaaaaatgtacctgagtggaatccaactcca
agatcaaagcaagaaccaggatcagaaagtcctatggaagattcaccttcaacagaccgg
ttgcgttttgacagatttgatatatgccgcttgttaaaacatggtgcatctctccttgga
tctgctggtgcagaatttgaagtccaggatgataaatcaggtgaaattgatcctaaagag
cggatagcacgacagaggaaactgttacagaagaagcttggcttagatatgggtgctgca
attgggatgaatactgaagatctgttcaatgatgaagatctggactattctccttcttca
gtttcactagtaaacaaacaacctactcttcaggccgctgagttaattgactcagaattt
agagctggtatgagcagcagacaaaagaataaagccaaaagaatggctaagctgtttgca
aagcaaagatctagagatgcagtggaagctaacgagaagagcaatgatagcacggatggg
gaaccagaagaaaagagaaggaaagttgcaagtgttgtcatcaaccaacctgccacagac
tcaaaaacattagtagaaaatgcttcagaagaggcaaatgaatggcctctggaaagtttt
tgtgaagaggtgtgcaatgatctctttaacccttcctgggaggttcgacatggtgcaggt
actggactgagagagatactcaaagctcatggtaaaagtggtggtaaaatgggagacagc
tcattagaagagatgattcagcagcatcaggagtggctggaagacttggttattagactt
ctttgtgtgtttgcattagacagatttggagactttgtttcagatgaagtggtagcacca
gtacgtgaaacttgtgctcagactttgggagtggtactaaagcatatgaacgagactgga
gttcataaaactgtggatgttctcctgaagctgcttacacaggagcaatgggaagtgaga
catggtggactcctaggaattaagtatgctttggcagtgcgtcaggacatgattgatacg
ttattgcctaaagtgttgcctgcaatagttgaaggtctccaagatttggatgatgatgtc
cgagctgttgctgcagcatctttagtacctgtagtggaaagcctggtccaccttcagtct
cagaaggtgcctttcattcttaatacgttatgggacgcgctccttgagttggacgacttg
acagcttcgacaaacagtatcatgatccttctttcttctcttctgacttatcctcaggtc
cgcaaatgcagtattcagcagtcgctcacagtgttggtcccacgtgtgtggccgttcttg
catcatactatatcctctgtacgaaaagcagcactggaaacattattcacactgctctct
acccaagaccagagctcttcaacgtggctaactccaattctgcaagacatgttgagacat
atatttcagttctgtatcttagaaagcaaccaagaaattctggatcttattcataaggta
tggctggaactgctaaacaaagcatctgttcagtatgtggttgcagctgcttgtccatgg
atgggagcttggctctgcttaatgatgcagccatctcatttgccaattgatttaaatatg
ttgctagaagtaaaaaccagatcaaaagaaaaggcagctgctaaactgcgtcaaggtcaa
acccagaacaaggaagtaattcaggaatatattgctggggcagacagcattgcagaagat
ccagcaaccagggattatgttgtcatgcgagctcggatgatggcagcaaagttgctggga
gcactttgttgctgtatttgtgaccctggtgtaaatgctgttactcaagaaataaagcca
gctgaatcattagctcagctactgctcttccacttgaattctaaatctgccttgcagagg
attagtgttgcattagtaatctgtgagtgggcagccttgcaaaaggaatgtagaactgtg
gcaatttgcgtgcaaccttgtttacttggggtgctgtctgaacacctctattatgatgaa
attgctgttccttttacacgaatgcagaatgaatgtaaacagcttatttcattgttagct
gatgcgcacattgacattggaaacagaataaactgcagtgtatttacaatagatcaagcc
aatgatctggttacttctgtttttaatgaagtgacatcatcttttactctgaatcctaaa
attctgcaacagttggatagtaaacgacagcaagtccaaatgactgttacagaaacaaat
caagagtggcaagtgctgcatctgcgagtccatacttttgctgcgtgtgcagttgtgaat
ttgcagcaactgccagaaaaattaaatcctgttataaagcctttaatggaagctatcaga
aaagaggagaatacactagtacaaaactatgtggcttcatgcatagcaaaattacttcag
cagtgtacaacaaggtctccttgtcccaactccaagataataaaaaatctctgcaactcc
ctctgtgtggacccacatctcaccccattagcagcgtgtcctgcacagcctcagagtggc
aatgaaaattcaaaaggacccaactctgacaaagatgggatgcatcatacagttactaag
cacaggggaataattacactgtacagacaccagaaagctgcttttgccatcacaagtcga
agaggtcctgctcctaaagctcccaaagccccaattgcagacctccccactggcagcagt
ggaagcattcctacagaacttgatgaggctcagaaaccatatgttgttcagagaagagga
gctgagtttgccttatctacaatagctaaacattttggtgctgaaatggcaaagggattg
cctcatctctgggatgctatggttggttcattaaggaacaacattcacataaataatttt
gatcgaaagtctttgctggaaaaaggagatgctcctgcccaggagttagtaaactcttta
caggtttttgaaataacagcagcctcaatggatattcagcttcatcctctgttaattgag
catttgcctcatctttgtatgtgccttcaacatcctagcactgcagtgagacacatggct
gctcgctgtgtaggtgttatgagcaaaatagctaccatggaaacaatgaatatatttcta
gagcaagttctaccatggctgggagcaatagatgacaacaccaaacaagaaggcgcaatt
gaagcgcttgcatgtgtaatggaacagctcgacgtaggtattgttccatacattgttctt
ctggtagttccagttctgggtagaatgagcgatcagacagacagtgtacgtttcatggct
actcagtgcttcgcaacactaattagactaatgcctcttgaggctggtataccagatcca
ccaaacatgtctgaagaattaattcgaatgaaagctaaagaacgccactttctggaacaa
ttgttagatggaaaaaaactggaaaactataaaattccagtaccaatcaaagcagagctg
agaaaataccagcaggatggagtgaactggctggcatttctcaataaatacaaacttcat
ggaattctttgtgatgatatgggcttagggaaaactttacagtccatttgtattcttgca
ggcgaccattgcctgagggctcaagaatatgcaagaacaaaactggtagacagtgtcccc
cttccctcgttggtggtatgccctcctacactcacaggacactgggtggatgaagtggga
aaattttgctccaaagaatatcttaatcctttgcactatacaggacctcctactgagaga
gcaagattacaatatcaggtgaaaaggcacaatctcatagtggcttcgtatgatgttgtg
agaaatgacattgatttcttcagaaatattaagtttaattactgcattcttgatgaaggc
catgtaataaaaaatggaaaaacaaaactgtcaaaagcagtaaaacagctgactgccaat
tacaggataattctttctgggacaccaattcagaacaacgtcttagagttgtggtcattg
tttgacttccttatgccaggatttttgggtactgaacgccaatttgcagctcgttatggc
aaaccaatactggcaagtagagatgcccgaagctccagtcgtgaacaagaagctggggtt
cttgcaatggaagcactgcaccgccaagttctgccattcttgctaaggagaatgaaagag
gatgtactgcaagatcttccacccaaaattattcaagattattactgtgttctcagtcct
ttacaggttcagctttatgaagactttgccaagtctcgtgccaaatgtgacattgatgaa
acagtttcttcaatttcactacgtgaagaaactgaaaaaccaaagcttaaagctacaggt
catgtatttcaggcattgcaatatttacggaagctatgcaaccatccagcactagtgctg
acaacccagcatccagaatataaaagaattacagagcaacttgcagctcataattcatcc
cttcgagatatccaacatgcacctaagctttctgcattaaaacaactgctgctagattgt
ggtttgggaaatggtggatcttcagagagtggtacagaagctgttgtggcccaacacagg
atacttatcttctgtcaacttaagagcatgctggacatagtagagcatgaccttctcaaa
cctcagttaccttcagtcacctacttacgattagatggtagcatacctgctggccagagg
cattccattgtttcacggtttaataatgacccatctatagatgttctgttgctcactact
catgttggtggattgggacttaacttgacaggggcagacacagtagtgtttgtggaacat
gactggaacccaatgagagacctgcaagccatggaccgggcacaccgtattggacagaaa
cgtgttgttaatgtctatcgcctgataaccaggggaactctagaggagaagattatgggt
cttcagaagttcaaaatgaacattgctaatacagtgatcagccaagaaaatgcaagccta
caaagcatgggaacagaacagcttcttgatctcttcactcttgacaaggatggaaaaact
gaaaaacctgatacttctacctcttctgggaaagcatcaatgaaatcagtgctcgaaaac
cttggagaactatgggatcaagaacagtatgacactgaatacagccttgaaaactttatg
cattcattaaagtaa
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integrated database retrieval system
