Tympanuchus pallidicinctus (lesser prairie-chicken): 128077463
Help
Entry
128077463 CDS
T08967
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_5
LRR_13
Motif
Other DBs
NCBI-GeneID:
128077463
NCBI-ProteinID:
XP_052532594
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSNLGKEKDCKEKDPKVPSSKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAVK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatctaggaaaagaaaaggactgtaaagagaaagatccaaaagtcccgtcg
tcaaaagaaagggagaaggaggccaaagcctctggaggatttgggaaagaaagcaaagag
aaggagcccaagaccaaagggaaagatgccaaagatggaaagaaagactccagtagcacg
cagcctggggtagctttttcagtggacaatacgataaaaagacctaatccagccacaggt
acccgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattcaatgcgcttggacttgtccaagaggtctatacacatgcttccatcagctgtcaaa
gagttaacgcagttaacagaactttatttatacagtaacaaactgcagtctctgccagca
gaggtgggctgtcttgtgaacctgatgacactggccctgagtgagaattcactcaccagt
ttgcctgactctcttgataacttgaagaaactgcgcatgcttgacctgcggcataacaaa
ctgagagagattccttcggtggtgtacagactgacttctctcgccactctttacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaagctcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagctgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaagagattggaagttgc
acgcagatcaccaaccttgacttgcagcacaatgagctcttggacctgccagaaaccata
ggaaatctatccagtttaagtcgtcttggcctgaggtacaataggctgtcagcaattccg
aagtctttagcaaaatgcagtgaacttgatgaactgaacctggagaacaacaatatttct
actttaccagagggtcttttatccagccttgtcaagctgactagtttaacactggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aacatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacctctctccccttggactttgggact
tggactagtatggtagaactgaacttagctactaaccaactcacaaagatccctgaggat
gtgtctgggcttgtttctcttgaggttcttatattgtcaaataatctcctaaaaaaactt
ccccatggaattggaaatctccggaaactccgagagctagacctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaat
aatcagttgaccacccttcccagaggtatcggtcaccttaccaatctgactcaccttggg
cttggagagaatcttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaacctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccactcagccaccttccgcctcagatt
gttgcaggaggaccctctttcatcattcagttcctaaagatgcagggaccataccgtgcc
atggtctga
DBGET
integrated database retrieval system
