Tympanuchus pallidicinctus (lesser prairie-chicken): 128077476
Help
Entry
128077476 CDS
T08967
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03410
Base excision repair
tpai03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128077476 (POLL)
03450 Non-homologous end-joining
128077476 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128077476 (POLL)
Enzymes [BR:
tpai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128077476 (POLL)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
128077476 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
128077476 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
BRCT_2
HHH_5
LIG3_BRCT
NTP_transf_2
PTCB-BRCT
HHH
Motif
Other DBs
NCBI-GeneID:
128077476
NCBI-ProteinID:
XP_052532654
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MLLRSMSASGCSLQQRCSAAAASQPHCSPGERGAAQPMEPQGIVKAFPKRKKVRDDSGKS
VPPKIPKEGTEEPEAEWLKPVAAYVLQAGIGQARAEIFHKQIVQNGGFVHSRLCSEVTHV
IVAEDMDCDRAFRLLKLAKLPSRLQLVKASWLSDCIRDQKLLNTAGYSVFIPRRYREEGE
QQQQFLGSEGIQSSTEESAAEPNVKAQVGDSSQQNLGSLAQQQPSEVRLPIQALLPADRS
CVLLLKVCDDEDSEGEDASVTQGDLEALISGHYPVKLSEETSGSSSAVAQPVSKWVCAQS
SHSKKENHNQCITEKLEVLAKAYSVQGDKWRSLGYVKAINALKSYHKPVTSYQEACKIPG
IGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTAQMWYQQGFRTLDDVR
TKASLTSQQAVGLKHYEDFLERMPREEAAEIEQTVRQAALALKPGLVCVACGSYRRGKAT
CGDVDVLVTHPDGQSHRGLFSKLLDNLHESGFLTDDLVSQEDNGEQKKYLGVCRLPGPAR
RHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSMAVVRGPGGVK
VASGHALPTPTERDVFAQLGLPYRKPSERDW
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcagaagcatgtctgcctctggatgctctttgcagcagcgctgttcagcagct
gcagcctcgcagcctcactgctccccaggggagcgaggcgcagcccagcctatggaaccg
caagggattgtcaaagcctttcccaagaggaagaaggtgagggatgactcagggaaaagc
gtccctccaaagatcccgaaagaaggaacggaggagcccgaggcggagtggctgaaacca
gttgctgcctacgtattgcaagctggcattggccaagctagggcagagatcttccacaag
cagattgtccagaatgggggatttgtacacagccgtctctgctcggaggtgacacacgtc
attgtagctgaagatatggactgtgatcgggccttccggctcctcaaattagccaagctg
ccttcgaggttgcagctggtgaaggcatcctggctcagtgattgcattagagatcagaag
ctgctgaataccgctggctacagtgtctttatccctcggaggtaccgggaagagggagaa
cagcagcagcagttcctgggcagtgaaggaatccagtcctcaacagaggagagtgcagca
gaaccaaatgttaaagcacaggtgggggattcctcacagcaaaacctgggcagccttgca
cagcagcaaccatctgaggtgaggcttcccatacaggctctgcttcctgcggacaggtcc
tgtgtactacttttgaaagtctgtgatgatgaagacagcgaaggagaagatgccagtgtc
actcagggagatctggaagcactgatttctggccactatcctgtgaaattgtcagaggag
accagcggcagctcttctgcagtggcccagcctgtcagcaagtgggtttgtgcacagtcc
tcccacagcaagaaggagaatcacaaccagtgcatcacagagaagctggaagtgctggca
aaagcctattctgtccagggggacaagtggagatctctgggctacgttaaagccatcaat
gcactcaaaagctaccacaaaccagttacctcctaccaggaagcctgtaaaattcctggg
attgggaagcgaatggcagagaagatcctggagatcttggagagtggacatctgcgcaag
ctggatcatatcagtgagagtgtgcctgtgctggagctattttccaacatctggggagca
ggagtcaagacagctcagatgtggtaccagcaggggttccggacgctggatgatgtccgc
acaaaggcgtctctcaccagccagcaagccgtgggcctgaagcactacgaggatttcctg
gagcgcatgcctcgggaggaagctgcagaaatagagcagactgtcagacaagcagccctg
gccctgaagcctgggctcgtgtgtgtggcatgtggctcctaccgtcgtgggaaggccacc
tgcggagatgtggacgtgctggtcactcacccagatggtcagtcccaccgtgggctgttc
agcaagctgcttgacaacctccacgagagcggcttcctgacggatgacctggtgagtcag
gaggacaacggtgagcagaagaagtatctgggggtgtgccgccttcctgggccagcccgt
cgtcaccgccgtctggacatcatcgtggtaccttacagtgagtttgcctgcgccctgctc
tacttcaccggctcggcccacttcaaccgctccatgcgtgccctggccaagaccaagggc
atgagcctctcagagcatgccctcagcatggccgtggtgcgaggccctggtggtgtcaag
gtggcatccggccacgctctgcccaccccgaccgagagggatgtcttcgctcagctgggg
ctgccgtaccgaaagccctcggaacgggactggtga
DBGET
integrated database retrieval system
