Tympanuchus pallidicinctus (lesser prairie-chicken): 128077522
Help
Entry
128077522 CDS
T08967
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128077522 (MMS19)
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128077522 (MMS19)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128077522 (MMS19)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
128077522 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
128077522
NCBI-ProteinID:
XP_052532785
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MAAAAEALAASVRDFVTGQQDGRAAELAAGVKDGSWTILQLVEALGFCLENTDPRTRGRG
IQLLSQVLLECHSLLQEKEVLHLVLFYENRLQDHHLMIPSVLQGLRALSLCEALAPGRAV
SMLKAIFQEVHVQSLMQQDRYTVYSIITNFMATREEELKGLGADFTFGFIQVMDGEKDPR
NLMVAFQIVRDLIVKNYALGPFVEELFEVTSCYFPIDFTPPPNDPHGIQREDLILSLRAV
LASTPQFAEFLLPLLIEKMDSDLQSAKLDSLQTLTACCAIYGQKELQEFLPSLWSSLRRE
VFQTASEKVEAECLSALHALSACLSRSVLSSDAEDLLDSFLNSILQDCRHHLCEPDMKLV
WPSAKLLQAAASASLRTYHRLTHSILPLLLEQYNKHSQSSQRRTILEMLLGFLELQQKWG
RVEEDESALLLLQETVCSVVFSALTDPSVQLQLVGIRALTVLGSLQGFLSPSHLELVVDH
LVRLALHEEDSQSSEAAMEAAGSLAPVYPNVFSGRMVPRLGEELQSEREEESSQDLCSLQ
QRCLQALAAVSTHTSIVKETVPVLLQHLRNVQKGSEAGNAQEVVSVCQSLHRVALQCQQD
AEGCWYYHQAVVPCLLAMAVQAATQESSHPLVSKALLEEEVLTAMVPVISAATTHLSPEL
AAQSVSHVVPLFLDGEVSFLPQNSFPCSFQPFEDGECLEPQRRLVALLMAFVCSLPHNVV
IPQQERLLRELLALSCSCSCPFTATTASKCFAGLVNKHPAGQQLDEILQLAVNRMEPGLT
EGPHRTQALTLLLWVTKALVLRYHPLSSHLTDKLLGLLSDVELGPTAADGFSLLMAESPD
VLHKGCHADVRIMFRQRFFTDNVPKLVQGFHGAGADVKANYLKSLSHVLNHLPKPVLVTE
LPTLLSLLLEALSCSDRVVQLSTLSCLQPLLLEAPQIMSLHIDTLVTKFLSLTSSPAMAV
RIAALRCAHALTSLPTTVLLPYKARVIRALAKPLDDKKRLVRKEAVAARGEWFLVGSPGR
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgctgaggcgctcgctgcttccgtccgagacttcgtgaccggacagcag
gacggccgcgccgcggagttggcggcaggagtgaaagatggaagctggactattctgcag
cttgtggaagccctggggttctgcctggaaaacaccgatccccggacacgagggcgaggc
atccaactgctgtcccaagtgctgctcgagtgtcactccttgctccaggaaaaggaagtt
ctgcacctggtcctgttttatgagaaccggctgcaggatcatcacctcatgatcccttca
gtgctccagggtctgcgtgcactgagcctatgtgaggcgctggccccagggcgagcagtt
tctatgctcaaagccatcttccaggaggtgcacgtgcagtccctgatgcagcaggaccgc
tacacagtctacagcatcatcaccaacttcatggccaccagggaggaagagctgaagggc
ctgggtgctgatttcactttcggcttcatccaggtgatggatggggagaaagatccccgc
aacctgatggtggccttccagattgtgcgtgatctcattgtcaagaactatgccctgggt
ccctttgtggaggagctgtttgaagtgacatcctgctacttccctattgattttactcca
ccccccaatgatccgcatggcatccagagagaagatctgatccttagcctccgagctgta
ctggcctccacaccacagtttgctgagttcctgctccctctgctcatcgagaagatggat
tcagacctgcaaagtgccaagcttgactccctgcagactctgactgcttgctgtgccatc
tatgggcaaaaggagctacaagaattccttcctagcctctggtcatccctgcgcagggag
gtgttccagacagcgagtgagaaggttgaggcagagtgtctgtctgcattgcacgccctt
tctgcttgtctctcccgttctgtgctcagctcagatgctgaagacctgctggactccttc
cttaacagcattctgcaagattgcaggcaccatctgtgtgagcctgacatgaagctggtg
tggccaagtgccaaactgctgcaggcagcagcaagtgcctccctccgcacttaccatcgt
ctcacccacagcatccttcccctgctgctggagcagtacaacaagcattcgcagagcagc
cagagaaggacaatcttggaaatgctgctgggtttcctggagttgcagcagaagtgggga
cgtgtagaagaagatgaaagtgctctgctgttgctccaagagacagtttgctctgtggtg
ttctcagcactcacagatcccagcgtgcagctccagctggtcgggatcagggcgctgact
gtcctgggctctctgcaaggcttcctgtctccctctcacctggagctggttgtggatcat
cttgtccggcttgctcttcatgaagaagattcccagagcagtgaagcagcgatggaagca
gctggatctctggcccctgtctacccaaatgttttctctgggcgcatggtgcccaggctt
ggagaggagctgcagtcagagcgagaggaagagagctcccaggatctctgctccttgcag
cagcgctgcctgcaggccttggcagccgtgtccacgcacaccagcatcgtgaaggaaact
gtccctgttctgctccagcacctccggaatgtgcagaaagggagcgaggccgggaatgcc
caggaggtggtctcagtatgccagagcctgcaccgcgtggccctgcagtgccagcaggac
gcggagggctgctggtattaccaccaggcagtggtgccgtgtctgctggctatggctgtt
caggctgccacacaagagagcagccacccactggtaagcaaggcgctgctggaggaggag
gtgctgactgccatggtccctgttatcagtgctgccaccactcaccttagccctgagctg
gctgcccagagtgtatctcatgtggtgcccctcttcctggatggagaggtctcctttctg
ccccaaaacagttttccgtgctctttccagcccttcgaggatggggagtgtttggagcca
cagagacgcctagttgccctcctcatggcctttgtctgttccttaccccacaatgtggta
attccacagcaggaacggttgctccgggaactgctggcactgagttgctcctgcagctgt
cccttcacagccaccacagcttccaagtgctttgcagggcttgtaaacaagcacccagcg
gggcagcagctggatgagatcttgcagcttgcagtgaataggatggagcctggccttaca
gaagggcctcaccgaacgcaggcactcaccctgctgctctgggtgactaaagccctggtg
ctgcgctaccaccccctgagctcccatctaacagacaagctgctgggcctgctgagtgac
gtggagctgggccccactgcagccgatggcttctccctgctcatggcggagtccccagac
gtgctgcacaagggctgccatgctgacgtgcgcatcatgttccgccagcgcttcttcact
gacaacgtgcccaagctggtgcaaggcttccatggggctggtgccgatgtgaaggccaat
tacctgaagagtctatcccatgtgctcaaccatcttcccaagcctgtgctggtgacagaa
ctgcccacgctgctttccctcctgcttgaggccttgtcctgctcagaccgtgtagtacag
ctctccaccctgagctgcctccagccgctgctgctcgaagccccccagattatgagcctg
cacatcgacacactggtcaccaagttcctcagcctcacctccagccccgccatggctgtc
cgcattgctgccctgcgttgtgcccacgcgctcaccagcctgcccacaacagtgctgctc
ccatacaaggcccgagttatccgggcgctggccaagcctttggatgacaagaagaggctg
gtgcggaaggaggcagtagcagcacgaggggaatggttcctggtggggagcccaggcagg
tga
DBGET
integrated database retrieval system
