Tympanuchus pallidicinctus (lesser prairie-chicken): 128077574
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Entry
128077574 CDS
T08967
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128077574 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
128077574 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128077574 (PDLIM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
128077574
NCBI-ProteinID:
XP_052532960
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MGTHRIVLTGPGPWGFRLVGGRDFEQPLTISRVTPGSKAAVANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKGCADELTLTVSRTESKVWSPLVNEEGKAHPYKMNLASQPQQRPTQFPCA
FSMTCKPAGLNSRRSPMGAQQAPFASVYNPLQSPSVEARGRHSPGALSSQVRVGPEQLKH
AAQACPKSPVEVEVPGLKVLHVQFNSPLQLYSQSNIMDSLQGQISSISPDFPSLDQHSHP
SGSIAIDRDSEVYKMLQENQESHEPPRQSASFLVLQEILESEEKGDPSKPSGFRSVKAPT
TKVASSIGNAQKLPMCDKCGSGIVGVFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVEDQ
IYCEKHARERVVPPEGYEVVTVFPK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgggaacccatcgcatcgtgctgacgggccccgggccatggggcttccgccttgtgggc
ggccgggacttcgagcagcccctcaccatctcacgggtgactccaggtagcaaagctgca
gtagccaacctgtgtataggagaccagatcatagccattgatggagtgaacacagataac
atgacgcaccttgaggcgcagaacaaaatcaagggctgtgcggatgaactcaccctgacg
gttagcagaacggagtcaaaagtctggtcaccgcttgtaaacgaagagggaaaggcgcat
ccttacaagatgaatctagcctcccagccccagcagagaccgacgcagtttccatgtgca
ttcagcatgacgtgcaagcctgctggtctgaacagccgccgctcgccaatgggtgcgcag
caggctccctttgcctctgtctataacccgctgcagtcacccagtgtggaggcacggggc
aggcacagccctggtgccctgtccagccaggttcgtgtggggccggagcagctgaagcac
gcggcccaggcctgccctaaaagccctgtggaggtggaggtgccaggactgaaggtgctg
catgtgcagttcaattctcccctgcagctctattcgcagagcaacatcatggattccctg
caggggcagatctcttccatcagccctgatttccccagtttagatcagcacagccatccc
tcaggcagcattgccatagacagagactctgaggtttacaagatgctccaggagaaccaa
gaatcgcatgagccacccaggcagtctgcttccttcctagtgctgcaggagatcttggag
tcagaggagaaaggagatcccagcaaaccatctggatttaggagcgtcaaggctcccacc
acaaaggtggcctcatcgattgggaatgcccagaagctgcccatgtgtgacaagtgtgga
tctggcattgtaggggtgtttgtgaagattcgggacaagcagcgtcaccctgagtgctac
gtgtgcagtgactgcggcaccaacctcaagcagaaaggacatttcttcgtggaagatcaa
atctactgtgagaagcacgcacgggagcgagtggtgcccccagagggctacgaggtggtc
actgtcttccctaagtag
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