Tympanuchus pallidicinctus (lesser prairie-chicken): 128077717
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Entry
128077717 CDS
T08967
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04110
Cell cycle
tpai04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128077717 (SMC3)
04114 Oocyte meiosis
128077717 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128077717 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tpai00535
]
128077717 (SMC3)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128077717 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
128077717 (SMC3)
Proteoglycans [BR:
tpai00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
128077717 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
128077717
NCBI-ProteinID:
XP_052533191
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSAESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggctttcgaagctaccgggaccaaaccattgtg
gatccattcagttcaaaacacaatgtcattgtgggaagaaatggatcaggaaaaagcaac
ttcttttatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgccctgaacag
agattggctttgttgcatgaaggtactgggcctcgtgttatttcagcttttgtggaaatt
atctttgacaattcggacaacaggttaccgattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaacgat
gtaatgaatcttcttgaaagtgccggattttctcgcagtaatccgtattatattgtcaag
caagggaagatcaaccagatggccacagctcctgactcccaaaggctgaagttactaaga
gaagtggctggtaccagagtgtacgatgaacgtaaagaagagagtatttcactgatgaaa
gaaacagagggtaagagagagaagatcaatgagttgttgaaatacattgaagagcggctt
cacacgcttgaagaggagaaagaagagctggctcaataccagaaatgggataaaatgagg
agagcattagaatacacaatttataatcaggagcttaatgaaacgcgagctaagcttgat
gagctttctgccaagcgggagacaagtggagagaagtccaggcagctgagagatgcacag
caggatgctagagataaaatggaggaaatagaacggcaagttcgagaactgaagacaaag
atttctgcaatgaaggaagagaaagaacaacttagtgctgaaagacaggagcagattaag
cagaggactaagctggaacttaaggctaaagatctgcaggatgaattagctggcaacagt
gagcaaaggaaaaggctgttaaaggagaggcaaaagcttcttgagaaaattgaggagaaa
cagaaagaattagcagaaacggagccgaagttcaacagtgtaaaagagaaagaagagaga
ggaattgctagacttgcacaggctacgcaggaaagaacagatctttatgcaaagcaaggt
cgaggaagccagttcacatccaaagaagaaagagataagtggataaagaaagaactgaag
tctctagatcaagcaatcaatgacaagaagcggcagattgcagctatacacaaggattta
gaggatacagaggcaaataaggagaaaaatttggaacagtacagtaaactggaccaagat
cttaatgaagtgaaggctcgtgttgaagaactggacagaaagtactatgaagtgaaaaat
aaaaaggatgaactacagagcgaaagaaattatctgtggagagaggagaacgcagagcaa
caggctcttgctgctaagcgggaggacctggaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaacggtatcgacagcataaacaaggttttggagcacttccgt
cgaaaaggaataaaccagcacgttctgaatggctatcatggcattgtgatgaacaacttt
gaatgtgaaccagctttctacacgtgtgttgaagttactgcagggaacaggttattttat
cacattgtggattctgatgaagtcagtacaaaaattttaatggaatttaacaaaatgaac
cttcctggagaagttacattcctccctctgaacaagctagatgttcgagatactgcttat
cctgagactaatgatgctattcctatgatcagtaaactgagatacaatcccagatttgac
aaagctttcaaacacgtgtttggaaagactctgatttgtcgtagcatggaagtatctacc
cagctggccagagctttcactatggattgtattaccctggaaggtgatcaagtcagccat
cgtggtgctttgactggtggttattacgacacaagaaagtctcgtcttgaattgcaaaaa
gatgttagaaaggcagaagaagaacttggtgaacttgaagcaaaactcaatgaaaacttg
cgcagaaacattgaaaggattaataatgagattgaccagctgatgaaccaaatgcagcaa
attgagacacagcagagaaagttcaaagcctctcgggacagtattctgtcagaaatgaaa
atgctgaaggagaaaaggcagcaatctgaaaagacatttatgcctaagcaacgcagctta
cagagcttggaggcaagtttacatgctatggaatcgactagagagtcactgaaagcagag
ctggggacagatctgttgtctcaactcagtcttgaagatcagaaacgcgtggatgctctt
aatgatgaaattaggcaactgcaacaagaaaatagacagcttttgaatgagaggattaaa
ctggaaggcatcataacaagagttgaaacatatctgaatgagaatctgagaaaacgctta
gaccaagtggaacaagaactgaatgagctccgagaaacagaaggtggcacagttctcact
gccacgacgtcagaacttgaggctatcaacaaacgagtgaaggatacgctggcacgctca
gatgatctggataactctattgacaaaacagaagcgggaattaaggagctacagaagagc
atggaacgctggaagaacatggaaaaggagcatatggatgccattaaccatgacacaaaa
gaacttgagaaaatgactaataggcaaggcatgctcctcaagaagaaggaggaatgcatg
aagaaaatccgagaattgggttctcttccacaggaggcttttgaaaaatatcagacttta
agtttaaagcagttattccgcaaattggagcaatgcaatacagagctgaagaaatacagt
cacgttaataaaaaagctctggatcagtttgtgaatttctcagagcagaaggagaaacta
ataaagagacaagaggagctggacaggggctacaaatcaatcatggagctgatgaacgtg
ctagagcttagaaaatacgaggctattcagctgactttcaagcaggtgtcaaaaaatttc
agtgaagtattccagaagttggtccctggtggcaaggccacgttagtgatgaagaaagga
gatgtggaaggcagtcagtcccaagatgagggggagggcagcgctgagagtgaaagagga
tctggatcacagagcagtgtgccatctgtagaccagttcactggagttggcataagggta
tcattcacggggaagcagggtgaaatgagagaaatgcagcaactttcaggtggacaaaaa
tccctggtagctcttgccctgatatttgctatccagaaatgtgatccagctccattttac
ttgtttgatgaaattgaccaagccttggatgctcagcacaggaaagctgtttcagatatg
attatggaattagctgaacatgctcagttcatcacaacaacttttaggcctgaattgctg
gaatcagctgacaagttctacggtgtaaaattcagaaataaggttagtcatattgatgtg
atcacagcagaaatggccaaagacttcgtagaagatgacaccacgcatggttaa
DBGET
integrated database retrieval system
