Tympanuchus pallidicinctus (lesser prairie-chicken): 128077749
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Entry
128077749 CDS
T08967
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpai03016
]
128077749 (TRUB1)
Enzymes [BR:
tpai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
128077749 (TRUB1)
Transfer RNA biogenesis [BR:
tpai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
128077749 (TRUB1)
Prokaryotic type
128077749 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
128077749
NCBI-ProteinID:
XP_052533216
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MATGELGGRAAEKLFSLSGLFAVYKPKGATSAAVLNLLKERLLAEAGVQTKDNKRKKQAL
KIGHGGTLDSAATGVLVVGIGKGTKLLKTILAGSKKYTAIGLLGRATDTLDATGKVTEEK
PYDQVTKRDLENVLQKFTGDIMQVPPLYSALKKGGERLSTLMKRGEAVEAKPARPVRVYS
LSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCASIQELTRTKHGPFTLEEHALHE
DRWTIDEIARSLEHCMSLFPGEQSHKKFKTELPGETAVSREDK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggggagctggggggcagggcggctgagaagctcttctccctcagcgggctg
ttcgccgtctacaagcccaaaggggccacctcggctgccgtgctcaacctgctgaaggaa
aggctgctggcagaagccggtgtgcaaacaaaagataacaaaagaaaaaagcaagccttg
aaaattggacatggtgggactttggacagtgcagcaacaggagttctggtggttggtatt
ggaaagggaacaaaattgctgaaaactatattggcaggttccaagaagtacactgccatt
ggactactgggcagagctactgatacattagatgctacaggaaaagtaactgaagaaaag
ccttatgaccaagtaacaaaaagagatcttgagaatgtgctgcagaagttcacaggggac
ataatgcaggttcctccactctattctgccttgaagaagggtggagaaaggctatcaact
ctaatgaagagaggagaagcagtagaagcaaagcctgctcggccagtaagagtgtacagc
ctgtctctccaacagttccagccaccactgttcacactggatgttgaatgtggcggcggc
ttttatgtcaggagcctggtcagtgacattggcaaagaactttcaacctgtgccagtata
caggaactgacccgaaccaaacatggaccctttacgctggaggagcacgcgcttcatgaa
gacagatggacaattgatgaaattgcacgatccttagagcattgcatgtctcttttccca
ggagagcaatctcataaaaaatttaagacagagcttcctggagaaactgctgtgagccgt
gaagataagtga
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