Tympanuchus pallidicinctus (lesser prairie-chicken): 128078005
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Entry
128078005 CDS
T08967
Symbol
CDHR1
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128078005 (CDHR1)
Cell adhesion molecules [BR:
tpai04515
]
Cadherins
Cadherin related
128078005 (CDHR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
128078005
NCBI-ProteinID:
XP_052533754
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MKQWELLLHPRNSPNLLHDHLLLMTVICVQANYAPYFFDNGARSTNGNMALLSLSEDTPV
GAHVYTLNGTDPEGDPVTYGLTYEAGSRRYFSVDGNLGNVTLIEELDREKEDEIEVVVSI
SDGLSTVSEKVRILVTDANDESPEFINTPYIVQVPENSPSGSSIFKIEAVDRDTGSGGSI
TYFLQNIHANKFTIDRHSGVLRIKSGITLDYEKSRTHFVVVVAKDGGGKLRGDNKVFSAT
TTVTINVEDVQDTPPMFIGTPYYGYVYEDTLAGSEVLTVVALDGDRGKPNSIHYSIVNGS
EGSFEISNITGAISVIKSPNQLKKEVYELRVQASEVSPEGDVSAYAFAMVTIRVVDLNNH
PPTFYGESGPQNRFELTMYEHPPEGEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVV
PQTVLNEAQVTIIVENSAAIDYEKFKVLTFKLLAIEVNTPEKFSSTADVAIRLLDTNDNV
PKFSSDYYIARIPENSPGGSNVVAVTATDPDSGLWGEVKYSIYGTGADLFLIHPSTGIIY
TQPWAVLDAEVNSKYNFYVKAEDTDGKYSLAEVFITVLDVNDHSPEFNENIQEKTMIIGS
PVKIEAIDQDAEEPNNIVDYSIMQADPANVFDIDQSTGEIKLKSYIRSLDIIHNITKNKD
CIWSLVVQAKDRGSPSFSTTAVLKIDITEETLHKGPMAAFLMQTKDNPMKALGVLAGVMG
IMVLITIMISTAMFWRNKRSNKIMPVRRIIKKRQTQPSRTVRMEWLKFKRPSNAAEKFVV
EDDAKSLQNENSNNNVQAAPVPPAAPLPPPPPTLAASGNTAVWRVPTVSGSLTPKFINKQ
LKKRGHSSAHNALVSELKMKFEKRNAAMGEPHI
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtgggaattgttgcttcatcccaggaattccccgaacctactccatgaccac
ctactgctaatgactgtaatttgtgttcaggcaaattatgccccctatttcttcgataat
ggagccaggagcacaaatgggaacatggcactcctcagcctttccgaggacacaccagtt
ggtgcccacgtttatactctgaatggaactgatccggaaggagatcctgtgacgtacggc
ctgacctacgaggctggatccaggcgctacttttctgttgatgggaaccttggaaacgtg
acgctgattgaggaacttgacagagagaaagaagatgagattgaagttgttgtcagtatt
tcagatggcctgagtacagtttcagagaaagtgaggatccttgtaacagatgctaatgat
gagagcccagagttcatcaatacaccttacatagtccaagtcccagagaactctccttct
ggcagcagtatctttaagattgaggcagttgacagagacaccggttctggaggaagtatc
acctacttcttgcagaacatccatgctaataagtttacaatagaccgtcacagcggcgtc
ctgcgcatcaaatcggggatcaccctggactacgagaagtcaagaacgcattttgttgtc
gtggtagccaaggatggcggtgggaagctgaggggagacaacaaagtgttctcagccaca
acaactgtcaccatcaacgtggaggatgttcaggacactcctcccatgttcattgggact
ccctactatggatacgtctatgaggatacgcttgcaggctctgaggtcctcactgttgtt
gcacttgatggagacagaggaaagccaaacagtattcattactccatcgtgaatggaagt
gaaggttcttttgaaatcagcaacatcaccggagccatttctgttataaaaagtccaaat
cagctcaagaaagaagtgtatgaactaagagttcaggcatcagaagtcagcccagaaggg
gatgtctcagcatacgcctttgccatggtgactataagggtggttgacctcaacaaccat
ccgccgacattttatggagaaagcggtccccagaacagatttgaactgaccatgtacgag
catcccccagagggtgaaatcttgagagggctgaagattactgtcaatgattcagatcag
ggagccaacgctaaattcaacctccgtcttgttggacccggtggcatttttcgagtcgtt
ccccagacggtcctgaatgaggctcaggttacaataatagtggaaaattctgctgctatt
gactatgaaaaattcaaggtcttaacctttaagcttcttgcaatagaggtgaacacacca
gagaaattcagctcaacagctgatgtagcgatacgcctgctggataccaatgacaatgtc
ccaaagttctcctctgattactacattgccaggatccctgagaactctccagggggctca
aatgtagttgctgtaactgctacagacccagactctgggctttggggagaagtcaagtac
tctatctatggaacgggagcagatctgttcctaatccacccatcgacgggtataatctac
acccaaccctgggctgtattagatgctgaagtgaactcaaagtataatttctacgtgaaa
gcagaggacacagatgggaaatacagcttggctgaagtgtttatcactgtgctagatgtc
aatgaccactctccagaattcaatgaaaacatccaggaaaagacgatgatcatcgggtca
ccagtgaagatagaggctatagatcaagatgcagaagaaccaaacaacattgtggattat
tccatcatgcaagcagatccagccaatgtgtttgatatagaccaaagcacgggggaaatc
aagctgaagtcctatatccgttccctggacatcatccacaacattacaaagaacaaagac
tgcatatggtcattggtggtgcaggccaaagaccgaggctccccatccttcagtaccaca
gcagttctgaagattgatatcacagaggagactcttcacaaagggcctatggccgccttt
ttgatgcaaactaaagataaccccatgaaagccttaggagtgctagctggtgtcatgggc
ataatggtgctgataactatcatgatctctactgccatgttctggcgcaataagcggtcc
aacaaaatcatgccggtaagaaggatcataaaaaagagacagacccagccgtcccgcacg
gtgaggatggagtggctgaagttcaagaggcctagtaatgctgcggagaagtttgtcgtt
gaggacgatgccaagagcctgcagaacgagaacagcaacaacaacgtccaagcagccccc
gtgcccccagccgctcccttgcccccgccgccccccaccctggccgccagtgggaacacc
gcagtgtggcgggtgccaactgtgtccggctccctcactcccaagttcatcaacaagcag
ctgaagaagagaggtcatagcagtgcacacaacgccctggtgtcagagctcaaaatgaag
tttgagaagagaaatgcagctatgggtgagccacacatctag
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