Tympanuchus pallidicinctus (lesser prairie-chicken): 128078008
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Entry
128078008 CDS
T08967
Symbol
LRIT1
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
128078008 (LRIT1)
Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128078008 (LRIT1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
LRR_1
fn3
Ig_2
LRR_5
Motif
Other DBs
NCBI-GeneID:
128078008
NCBI-ProteinID:
XP_052533760
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MWITVSLLCFLVLGGLPWAGTSCPSQCSCAFHSLNEGTKARTVLCNDPEMTLTPVNIPVD
TFKLRIEKTAIRRVPGEAFHALHNLEYLWLPYNSLASLSGITFKGLRRLLELRLDGNDLI
SFPWETLSDMPQLRLLDLHNNELTSIPPDAARYIKNITYLDLSSNKLMTLPQALISTWAN
LQAVPYFPNDNSKIILGLQDNPWVCDCSLYEMVHFLNFQSPNIAFIEPRLKCFTPRSLAG
VFFSQVELRKCQSPVVHTSVAKVKTILGSTVLLRCGTTGVPIPELSWRRADGAPLNGTVH
QEISSDGMSWSILGLPVVSYLDSGEYICKAKNFLGATEAFISLIIMDSESTDDPNSSAKG
TWSGKASGMEAAAYNDKLVARYVITTSTMPTLGAGAGTGEDLLIPAGAQDSNPQNLLVSP
PTGQQEPERIVRSVRVIGDTDQSVTLAWKAPLAKNTTVFSVLYAVFGERDMRRINVEPGK
TKVSIYGLLPKTKYIVCVCVKGLIPRKEQCIIFSTDEVASAGGTQKLINVVVISVACVIA
VPLTLVVCCGALKRRCKKCFVRKPKEIQESYVTFESLSPGAKVKGVEGEYLTRHTPDESN
RLLSARSSVDSEAIPKIEGQPNEYFC
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcaccgtgagtttgctctgcttcttggtgctcggggggctgccgtgggcaggc
acctcgtgcccctcgcagtgcagctgtgccttccacagcctcaacgaagggacgaaagcc
aggacggtgctgtgtaatgacccagagatgaccctcacccccgtgaacatccctgtagat
actttcaagcttcgaatagagaagacagccatccgcagggtgccaggggaagctttccac
gcacttcacaacctggagtacctctggttaccttataactccctggccagcctcagcggg
atcaccttcaagggcctccgccgtttgctggagctgaggctagatggaaatgacttaata
tcatttccctgggaaaccttgtctgacatgccacagttaaggcttctggatttacacaac
aacgaacttacctcaatccctccagatgctgctcgttacatcaagaatatcacgtacctg
gacctttctagcaacaaactgatgactcttcctcaggctcttatttctacctgggccaac
ctgcaagcagtcccttactttcccaatgataactccaagatcatcctaggtttgcaagac
aatccttgggtgtgtgactgcagtctgtatgaaatggtccatttcctgaatttccagtct
cccaacatagcgttcattgagcccaggctgaaatgcttcacccctcgcagccttgcagga
gtcttcttcagccaagttgagctaaggaagtgtcaaagccctgttgtacatacgtctgta
gccaaagtaaagaccatcctgggcagcactgtgctactgcgatgtgggacaacgggggtg
cccattcctgagctcagctggagaagggctgacggtgctccactaaatggcacagtgcac
caagagatctctagtgatgggatgagctggtctatcctgggccttcctgtagtctcttac
cttgactctggagagtacatttgtaaagcaaagaatttcctgggggcaacagaagcattc
atatccctaatcatcatggactcagaaagcacggatgaccccaactccagcgccaaaggc
acgtggagtgggaaggcaagcgggatggaggcagctgcttacaatgacaagttagtggca
aggtatgttatcaccacctccaccatgcctaccttaggggctggagcaggaacaggagag
gatctcctcatcccagctggagcacaagatagcaacccccaaaacctactggtgagccca
cctactggtcagcaggagccagagcggattgtgagatctgtcagggtgataggagatact
gaccagagtgtcaccctggcctggaaggcccctctggcgaagaacacgacagtgttcagt
gtcctctacgctgtctttggagagagagacatgcgtcggatcaatgtggaaccagggaag
accaaggtcagcatttatgggctgctaccaaagaccaaatacatagtgtgcgtctgtgtg
aaagggctgatccctaggaaggagcagtgcatcatattttccacagatgaagttgctagt
gcaggagggacccagaaactcatcaacgtggttgtcatcagtgtggcttgtgtcattgcc
gttcctctgacgctggtggtctgctgcggagcactgaagagacgctgcaaaaagtgcttt
gtgaggaaacccaaggaaattcaggagtcctatgtcacctttgaaagtctttctcctggg
gccaaggtgaaaggagtggaaggagaatacttaactagacatacccccgatgagtctaac
aggctcctctctgcccgatccagtgtggactccgaagcaataccaaagatagaggggcaa
ccaaatgaatacttttgctga
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