KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128078071
Entry
128078071         CDS       T08967                                 
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
  KO
K24223  cilia- and flagella-associated protein 43
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:tpai03037]
    128078071 (CFAP43)
Cilium and associated proteins [BR:tpai03037]
 Motile cilia and associated proteins
  Tether/Tether head (T/TH) complex
   128078071 (CFAP43)
SSDB
Motif
Pfam: CC_Cfap43 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR5 WD40_CDC20-Fz WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR3_1st CFAP43_N Beta-prop_WDR36-Utp21_1st WD40 WD40_Prp19 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_ACSF4 WDR90_beta-prop_4th Leuk-A4-hydro_C
Other DBs
NCBI-GeneID: 128078071
NCBI-ProteinID: XP_052533882
LinkDB
Position
Unknown
AA seq 1699 aa
MAAAGEERRQGSPQRGAEALGGRRCSSPEETTLEVSWVQGFSNKNFGFINNQTVCYSCGN
YILFLDIKTKKTTALQCRTGQVGAFAVNPNYGVLAFSDRKLNPVIYIYSFPELNKLTELK
GHIQLDYTLLAFSFLGPYLASYSSFPDFVLSVWNWQENILLCSESQPGVAATSISFNPMN
WQQLCFVTESSVTIWHIERNHDEHCLIQNPVKLPDVQGSLNHHKDLFFPYPCVEDPYHGP
VMPVSAIAGLVGDEAETFVPRSDIKPSLRPTAHCWTATSDIYLGCQEGYILAIDTMKCSA
SIIQRKPLSEQVRKVSDMLDYIRREVQKKKGGKPKALQRTVVFTMAFCNEGLYTAGIEGI
LYMYRIRDLQYEMEICADISEPISTLIFSPDYTILLIITDQGTIYSYEPAHSGEAVKLLN
AFSSYLLAADFLTPGDKYCVSVTISGEVKVWLLENGTCLSVLNLDIEATAMACCPSSNSV
AVGTKGGQIYFIDITKVEAPRVVHRIFLSRFPVLSLHYDQSGQFLIIRAVEGYIFILDAR
PSKLFQVLGYVVLAGEVVSLSVVSDFKNNVVEVMVLLNVAEIQQTRLEIFCLSSTLMEGI
DKYANDQGMLNASAIKKEQYVLEYPLSSAVKLKDNTVYSYCTCASFICKYNLSKQSILED
PPVFLSEKVIPTNQFGSGFICLSPNSRWLASAAKDGVLFIYDTSTMELLVQNYCHSYEGG
GIRSVVFSPDGKFILVSGESDGALVCLKWKKGKEMEVKEADLHWQSLLTILNKSILDENA
VLRCMAGWQTESESTSESISEEKSEKSPLEPSSAALTEDGNLGNLHSDSTSEMTWLCQKT
EKVIKEESERFANQKKEIQMGIKKLHETIQKMMHENEQVPDIEKLGQQEFNLDVEEQEKA
QAEAEREVARIREKIEMEILANCYLQDVIKHECWDSMCVKGRAVKCFHMACEVKNYPLKK
RNEEELRTLEKVLHLRKIEAANLKVQKKVLETKSEAVFFEEEENTGEVMAGDTASCCLDG
SLSSQYGADTSILYHQLDLHSREQKVNQIVLLKDIIYKVKTAFNKEFDIVAQQKEQEIAR
IKERNIRIREILRQLDLQVEVWEPSLTCDEKPDQVFTVQDSEIKAEKYLTPQEREKAEML
TRLEMERHLASLDSERQRALNDMMGGVLEVTQEDILKIDIPPPYFISKPEDEWNDQEKKI
FRKYEEKVKELNEEKEKYRRALKNEWEELEASIQETTQNFDKNVCKLFEKKVNLEKVIYQ
EELKIVNLIYSLMLDEELDSRKAGLCHFLVKKQKEKVKMARTVETTRKKIDFYTGQYDNA
VAEDKNLEYGFRKNFADVPANLLDELLELYKCRPRTVTTEISLDTATCSRSSSMSAEDYK
DELTRLMKAMDELDNPEHMPNGLDPSIWESFCLARRNKFKSEQLVKWMALILAEIEVFLQ
RRIDDNEKMSSKIEKIFQELTWLQEEKIKFQLNLTFQFLLKQGQVEFESTEIPDYADAIF
IKKSVIEELNCNIMDQVEKKIASMVECKEFSKGIFQLEWEHKKMRMQIEDLNQKARDIAT
LPITKDRQLFLTMLDYDSHIAHRIAVMEQTLCVMDKLHKKNMKKHQKRIKELEKCISLKE
QANYELSLELKEMLVSVSERRHIYHAADMQHISERNAKRRYQEILKQKHLRGLIEEQEKH
LGILQAEAERLRSKTFPIL
NT seq 5100 nt   +upstreamnt  +downstreamnt
atggcggccgccggtgaggagaggcgccagggtagtccgcagcgcggcgccgaggccctg
gggggccgccgctgctcctcgcctgaggagaccacactggaagtgagttgggttcaggga
ttctcaaacaagaactttggctttatcaacaatcaaactgtctgctactcctgtggcaat
tacatcctcttcttggacattaaaacaaagaagacaacagcactgcagtgtcggactggc
caggtgggagcctttgcagtgaaccccaactatggagtgctggccttttcagatcggaag
ctgaatcctgtcatatatatctacagttttccagagctgaataaactgacagagttaaaa
ggtcacattcagttggactacaccttacttgcatttagtttcttgggtccatatctagcc
agttactcttcatttccagactttgttctttcagtatggaactggcaagagaatatcctc
ctgtgcagtgagtctcagccaggagtagctgcaacctccataagttttaatcctatgaac
tggcagcagctctgttttgttactgagagctctgttaccatctggcatattgaaagaaat
catgatgagcattgtcttatacaaaaccctgtgaaactccctgatgtgcaaggttctctg
aatcatcataaggatttgtttttcccatatccttgtgttgaagatccctaccatggccct
gttatgccagtttcagccattgctggactggtaggagatgaagcagaaacatttgtgcct
agaagtgatattaagccttcattgcgtcctactgcccattgttggactgcgacctctgac
atttacctgggctgtcaagaaggttatattttggcaattgatactatgaaatgcagtgct
tcaattattcaacgaaaacctctatctgaacaggtacgtaaagtatcggacatgttggac
tacattcgtagagaagtacagaaaaagaaaggtggcaaaccaaaggccctgcaaagaaca
gttgtgtttaccatggcattttgtaatgagggactgtacacagctggaattgagggcatt
ttatacatgtatcgtatcagagatctccagtatgagatggaaatctgtgctgacatctca
gagcccatatccaccctcatattctctcctgattacacaatacttctgattattactgat
cagggaacaatctattcttatgaacctgcccacagtggagaagctgtcaaactcctgaat
gcattcagcagttatttgctggctgctgatttccttactccgggggacaagtactgtgtg
tctgtaacaatttcaggtgaagtaaaagtttggcttctggaaaatgggacttgcctcagc
gtgctaaaccttgatattgaggcaacggctatggcttgctgtccctcttcaaacagtgtt
gctgtaggaacaaaagggggtcaaatctattttattgacattaccaaagttgaagctcca
cgggttgttcacagaatttttctttccagatttccagtactatctttgcattatgatcag
agtggccagttcctcatcattagagctgtggaaggatatatctttattctagatgctcgg
ccttcaaaattattccaagttcttggatatgtagtgttggcaggtgaggtggtgagtctt
tcagtagtttctgacttcaagaacaatgtagttgaagtgatggtgcttctgaatgtagca
gagatccaacaaacaaggctggaaattttttgcctgtcatcaacactcatggaaggaatt
gataagtatgctaacgatcaaggaatgctaaatgctagtgccattaaaaaggagcaatat
gttttggagtaccctctgagttcagcagtcaaactgaaggataacactgtttatagctat
tgtacctgtgcatctttcatctgtaaatacaatctctctaaacagagcattttggaagat
ccaccagtatttttatcagaaaaagtaattcctaccaatcagtttggatcaggattcatc
tgtttgtcacccaacagccgatggctggcttcagctgccaaggatggtgttttgttcatc
tatgatacttctaccatggagctacttgttcaaaactattgtcactcatatgaaggaggg
ggaatcagatctgtggtattttcaccagatggcaaattcatcctggtcagtggtgaaagt
gacggtgccctggtgtgtctgaaatggaagaagggaaaggaaatggaagttaaggaagct
gatttgcactggcaatctcttcttactatactgaacaagtctattttggatgaaaatgct
gttttaagatgtatggcaggatggcagactgagtcagaatccacatcagaatcgatttca
gaagagaaatctgagaagtcaccacttgaaccttccagtgcagctctgacagaagatgga
aaccttggaaatttgcattcagacagtactagtgaaatgacctggttatgtcagaaaaca
gagaaggtcattaaggaagagtctgaaaggtttgccaaccagaagaaagagattcaaatg
ggaattaagaagctgcatgaaactatccagaaaatgatgcatgaaaatgaacaggtgcca
gatattgagaaactgggacagcaggagttcaacctggatgtggaagagcaggaaaaagca
caagcagaggctgaaagagaagtggccaggataagggagaagattgaaatggagatttta
gctaattgctacttgcaggatgtcatcaaacatgagtgctgggattccatgtgtgtaaaa
ggacgggcagttaagtgtttccatatggcttgtgaagtgaagaattatcccctgaagaaa
cgcaatgaagaagagctgagaactttggagaaagttctgcacttaaggaagatagaagca
gctaatcttaaggttcagaaaaaagttcttgagactaaatctgaggctgtattttttgaa
gaagaagagaatacaggagaagtcatggctggtgatactgcatcttgctgcctggatgga
agtctgagttctcagtatggtgcagacacatctatactttaccaccaattggacttgcac
tccagggagcagaaagtcaatcagatagtattactgaaggacatcatatacaaagtgaaa
actgcttttaataaggaatttgacatagttgctcaacaaaaggagcaggagatagcacga
attaaagaaagaaacataaggatccgagaaatcttgagacaacttgacctccaagtggaa
gtgtgggagccaagtcttacatgtgatgagaaaccagaccaggtgtttactgttcaggat
tcagagattaaagctgaaaaatacttgactccacaagagagagagaaagcagaaatgctg
accagacttgaaatggaaagacaccttgcttctctggacagtgaaagacagcgtgctctc
aatgacatgatgggtggagttctagaagtcacgcaggaagatatcttgaaaattgatatt
cctccaccttattttatatccaagcctgaagatgaatggaatgatcaagaaaagaaaata
ttcagaaaatacgaggaaaaagttaaagagctgaatgaagaaaaagaaaagtatagaagg
gcactgaaaaatgaatgggaggaacttgaagcttccatccaggaaacaacacaaaacttt
gataagaatgtgtgcaaactttttgaaaagaaagtgaacttagagaaggtcatctatcag
gaagaactcaaaattgtcaatctcatttattctttaatgttggatgaggagttggacagt
agaaaagctggactttgtcatttcctggtaaagaagcagaaagagaaagtcaagatggca
agaacagtggagactacaagaaagaaaattgatttttacacagggcaatatgataatgca
gtagctgaagataagaatctggaatatggttttaggaagaattttgctgatgttcctgct
aatcttcttgatgaacttttggaactttacaaatgtcgcccaaggactgtaacaacagaa
atctctctggacactgcaacctgttctagaagttcttcaatgtcagctgaagattacaaa
gatgaactcacccgtttaatgaaagccatggatgaactggataatcctgagcacatgcct
aatggcttagacccatctatatgggaaagtttttgtctagctagacgaaataaattcaag
agtgagcagctggtgaaatggatggccctaattctggcagaaattgaggtctttctccaa
agaagaatagatgacaatgagaagatgagctcaaaaatagaaaaaattttccaagaactc
acttggctgcaggaggagaagataaaatttcaactgaatttgactttccagtttttgcta
aaacaaggacaggtagaatttgaaagtactgagatcccagattacgctgatgccattttc
attaaaaagagtgttattgaagaactgaattgcaacatcatggatcaagtagaaaaaaaa
attgctagcatggtggaatgcaaagaattctctaaggggatatttcagctggaatgggag
cacaagaaaatgagaatgcaaatagaagatctgaatcagaaagctcgggatattgcaaca
ttacctattaccaaagatcgccagctattcctaaccatgctggactatgatagccacatt
gcccaccgcatcgcagtgatggagcagactctttgtgtcatggataagctgcacaagaag
aatatgaaaaaacatcagaagagaattaaagagttggagaagtgcatcagtttaaaagag
caagcaaactatgagctgagccttgagctgaaggaaatgctcgtgtctgtttcagaaagg
aggcatatctatcatgcagctgacatgcagcatatttctgaaaggaatgcaaagcggcgt
taccaggagattttgaagcagaaacatctgcgaggtctcatagaggaacaggaaaaacac
cttggaattcttcaagcagaagctgaaagattaagatcgaaaacgttccctattctttaa

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