Tympanuchus pallidicinctus (lesser prairie-chicken): 128078153
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Entry
128078153 CDS
T08967
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128078153 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128078153 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128078153 (NFKB2)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
128078153 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
128078153
NCBI-ProteinID:
XP_052534061
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MLGLDGLLRPAASGTGLSGAACLPAAAGPAQRPLFPQAGGRPRSDMDEHFQPCLDGIDYD
DFSFGSHMVEQKEPLMETAVGPYLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGHKT
YPTVKICNYEGIARIEVDLVTHSDPPRVHAHSLVGKQCTEAGNCVAVVGPKDMTAQFSNL
GVLHVTKKNMMEIMKEKLKKQKTRNTNGLLTEAELREIELEAKELKKVMDLSIVRLRFTA
YLRDSSGNFTLALQPVISDPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKD
DIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGD
VSDSKQFTYYPVVEDKEEVERKRKKVLPQFPQHFGGGSHMGGAGGAGGFGAGGGGNLSFP
YSSGLGYNNLYSSSPHPVGGGYQGGVQMKAPNESGDGGDREVPTESNYCRELQRHAHLCH
LWLLAHRNAHALLDYSVTADPRMLLAVQRHLVASQDENGDTPLHLAIIHEQTAVIKQLIE
VVVSIPSQQIINITNNLQQTPLHLAVITKQPQVVQLLLQAHANPTLLDRYGNSLLHLALQ
TGDEEMLRMLLAHLGSATPYLLCLPNFHGLLPVHLAVKAKSPACLDLLVRKGADVNGVER
QGGRTPLHLAVEMENLNMATHLVKKLGANVNSRTFAGNTPLHLAAGLGSPTLTKLLLKAG
ADVQRENDEPISPSSSEASSDTDGDPEEQEQAMELGEPAPSPHPTPEEEQGETGPRQRRC
HTALDLTRSQKVRDILLQASQLCPDAELPTAPRPGNVLSLDGDALQGLEQLLNQDSSGSD
WMELAKRLGLCSLVETYKDTPSPSVSLLRSYELAGGSLGGLLEALDSMGLHGAVRMLRKP
EPLEKLQSTEVKEDSAYGSESVEEEQAAALKPRPVPEGELPHSQQQQVH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctggacgggctgctgcggccggccgcctccggcacgggactttccggagcg
gcgtgccttcctgccgccgccggccccgctcagcgcccgctgttcccgcaggccggcggc
cggccccgcagcgacatggacgagcacttccagccctgcctggatgggattgactacgac
gatttcagctttggctcccacatggtggagcagaaggagcccctgatggagacagcagtc
ggcccctacctggtgatcattgagcagccaaagcagcggggctttcgatttcggtatggc
tgcgagggcccttcgcacggggggctgccgggagcctccagcgagaaggggcacaagacc
tatcctactgtcaagatctgcaactacgaagggatagcgcgcatcgaggtggacctggtg
acgcacagcgaccctccgcgtgtgcatgcgcacagcctggtgggcaagcagtgcaccgag
gccggcaactgcgtcgctgtcgtggggcccaaagacatgacggcacagttcagcaacctg
ggagtgctccacgtcaccaagaagaacatgatggagatcatgaaggagaagctgaagaag
cagaagacgcgcaacacaaacgggttgctgacagaagctgagctgcgtgagatcgagctg
gaggccaaggagctgaagaaggtgatggacctgagtatcgtgcggctgcgcttcaccgct
tacctccgtgacagcagtggaaacttcactctagcactgcagcccgtcatctctgacccc
atccatgacagcaagtcccctggtgcttccaatctcaagatctcgcggatggacaagact
gcgggctcagtgcggggtggggacgaggtctacctgctttgtgacaaggtgcagaaagat
gacattgaggtgcggttctacgaggacgacgagaatggctggcaggcctttggggacttc
tcccccacggacgtacacaagcagtacgccatcgttttccgcacgcccccctaccacaag
cccaaaattgaccgtcctgtcaccgtgttcctgcaactgaagcggaagcgcgggggggac
gtcagcgactccaagcaattcacctattaccccgtggtggaggataaagaggaggtggag
cggaagcgcaagaaggtgctgcctcagtttcctcagcacttcggtgggggctcacacatg
gggggtgccggcggtgctgggggctttggagcaggaggaggtggtaacctcagcttccct
tattcatccggactgggatacaacaacctctactcctccagcccgcaccctgtaggggga
gggtaccagggtggcgtgcagatgaaggcccccaacgagagtggagatggaggtgacaga
gaggtgcctacagaaagcaactactgcagggagctgcagcggcatgcccacctgtgccac
ctgtggctgctggcgcaccgcaacgcccatgccctgctggactactcagttactgccgac
ccccgcatgctgctggctgtgcagagacacctggtagcctcacaagatgagaatggggac
acgcccttgcacctcgccatcatccatgagcagacggctgtgatcaagcagctaattgag
gtggtggtcagcatccctagccagcagatcattaacatcaccaacaatctgcagcagaca
ccgctgcacctggcagtcatcaccaagcagccgcaggtggtgcagctcctgctgcaggcc
cacgccaaccccaccctgctggaccgctacggcaactccctgctgcacctggcactgcag
acaggtgatgaggagatgctgcggatgctgctggcccacctgggctctgccaccccctac
ctgctgtgcttgcccaacttccatggtctcctgcccgtacacctggctgtgaaggcgaag
agcccagcctgcttggacctgctggtcaggaagggcgcggatgtgaacggtgtggagagg
cagggcggcaggaccccactgcacctggctgtggagatggagaacctcaacatggccacg
cacctggtgaagaagctgggagcaaatgtcaacagccggacctttgctggtaacaccccc
ctgcacctggctgccggcctgggctccccaaccctcaccaaactgctgctcaaagcaggg
gcagatgtgcagcgtgagaacgacgagcccatcagcccctcctcgtcagaggccagcagc
gacacggatggcgaccctgaggagcaggagcaggcaatggagctgggggagccagcccca
agcccccatcccacccctgaggaggagcagggggagacagggcctcggcagcgccgctgc
cacacagctctggacctgacccggagccagaaggtgcgggacatcttgctgcaggcctcc
cagctatgccctgatgctgagctgcccaccgccccccggccagggaatgtgctgtctctg
gatggtgatgcgcttcaggggctggagcagctgctgaaccaggacagcagcgggtcagac
tggatggagctggctaagaggctggggctctgcagcctggtggagacctacaaggacacc
ccttcacccagcgtcagcctgctgcgcagctatgagctggccgggggcagccttgggggg
ctgctggaggcgctggactccatggggctgcacggggctgtcagaatgctgcgcaaacct
gagccgctggagaagctgcagagcacagaggtcaaggaagacagtgcctatgggagcgag
tcggtggaggaggagcaggcggccgccctgaagccgaggccagtgccagagggcgagctg
ccccacagtcagcagcagcaggtgcactga
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