KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128078355
Entry
128078355         CDS       T08967                                 
Name
(RefSeq) laminin subunit beta-2-like
  KO
K06243  laminin, beta 2
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04510  Focal adhesion
tpai04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128078355
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128078355
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 Laminin_I F5_F8_type_C
Other DBs
NCBI-GeneID: 128078355
NCBI-ProteinID: XP_052534421
LinkDB
Position
Unknown
AA seq 1827 aa
MDVLVLALLLAGVPAAGGWEEPDPSQGCARGSCYPATGNLLVGRARQLSASSTCGLQGPQ
EYCIVSHLQDSEKCFTCDSRNPALRESHRIENVIYLHGPHSERSWWQSENGVEHVSIQLD
LEGEFHFTHLIMKFKTFRPAAMLVERSADFGRSWKTYHYFAYNCSKLFPSIPTHPSGHIG
EVLCEQRYSEIEPSSHGEVIFKVLDPSIPVVDPYSPSIQELLRVTNLRVNLTKLHTLGDN
LLDSRQEVLHKYYYAVDELVMRGSCFCHGHAAECATAPGAPPSVPGMIHGRCVCKHHTQG
LNCERCEDFYHELPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQ
HNTMGRRCHLCKPFYYRHPRSDIRAPTACIPCDCDPAGSLDGGACDAHTDVALGMIAGQC
RCKENVAGPRCDRCRHGAYGLSQGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFVA
GRSCSQCVPEFWGLSYDVGGCRPCSCDFGGAYSNRCSMEDGACPCRPHLMGRQCDQVQPG
FFCAPLDHYTYEAEQAVGRGPSHPQLPGAVRAEVPQDCPQHRSGDPAGRKARARPQRSPP
RSPQPRAAPRHSLQQPPKPDVEPVLRDGDGRMVTWTGLGFARVRDGAGLTFHVDNVPYPM
EYELLLRYEPESAEDWEAVVSISSRALPTGPRCGNLLPSEQMYHEGLPHSQRYVLLSQPF
CFEPSTPYEVTVRLQRASVTQRHPSAFILIDSLVLLPRVPELPGFHGAAVEAVQRLEELE
RYRCLEAFHMAPPHTLAEACARLVCSVSAVLHDGALPCQCDPQGSRSSVCQVLSGQCECK
PHVLGRRCDRCAPGSYGFGPLGCSPCACSPEGSVSQLCDAGSGQCRCQPGVMGRQCDRCQ
PGHWGFPSCRPCQCNGHAEECDLRTGSCLRCRDHTTGRHCERCQDGYYGDPVLGSGQQCR
PCPCPGYPGTRHYHGSACHADEETHHIVCLCAPGYTGPRCDRCSPGYFGTPEMEGGVCRP
CQCNNNIDTSDPGACDPHTGHCRRCLYHTAGPRCAQCQPGYFGNALQRSCRRCSCDPRGT
LSAHCTAGTCSCDRATGACACRANVVGRSCDRCAPNFWNLGGTEGCQPCGCHAMHATHPA
CDEVTGQCHCHLGFGGRVCSQCQENHWGDPELQCRACECEPLGAESPQCDRASGQCQCRP
GFGGLRCDRCQRGYQAAFPRCSPCHPCFGHWDAVLGSLQDGLQHLGARVRALHEGGSAAP
LSPRLRALEEALKHAERLLGEGSSPSSPLLQELAGQLDGSRTELDNFWKRLQELEQHVDQ
LEQADVLHHSRLARLSHELGGLNQTTSHLQAVLGTVTTAGFRESYQSIVVAARDSRQAEV
VANGTAGELNAARATQWAAEQALQQRGDAFRRSMAAQRKSLRETQKRASGLSVTGINEKI
CGAPGDRSCAESLCGGALCRDSVGMRHCGGVGCTGALPVSAQALSSARNASQQLEVALGQ
LSAVTQKMQEVQDLARGARSRAEEALERSQAARSRTEKATAQLRDFIRRIKAFLSEEGAD
PGSIELVARQVLNISLPSSPAHIQELLQEMQESISQLDGVDAVLNGTAQGLEAAQGLLAQ
GQDARERAEGVRDELAETQLALQVAQAQVMAAGSTLRRAKDGIRAAEGKVREAERRLQAL
QGKESRLQRRLRELAQRVTALQQRGRDARRLAQDAKDGAQRATAASRTLSQDLAQVTRRY
VVLKDRVSGMAGMAGGALQRVTRLTAEARDLLDKANSSKKRLEELEQHFGANEQAMAAKA
TRLQALERQVSGLLQEIRERANAYATC
NT seq 5484 nt   +upstreamnt  +downstreamnt
atggatgtcctggtcctcgctctcctcctggcgggggtgccagcagcagggggctgggag
gagccagatccatcccagggctgtgcccgtggcagctgctacccggccaccggcaacctg
ctggtggggagagctcggcagctcagcgcctcgtccacctgcgggctgcaggggccccag
gagtactgcatcgtcagccatctccaggactctgagaaatgcttcacctgtgactcacga
aacccggccctgcgtgagagccaccgcattgagaacgtcatctacctgcacggcccccac
agcgagaggagctggtggcagtcggagaatggcgtggagcacgtcagcatccagctggac
ctggaaggcgagttccacttcacacacctcatcatgaagttcaagaccttccgccccgca
gccatgctggtggagcgctcggccgactttggccgcagctggaagacgtaccactacttc
gcctacaactgctccaagctcttccccagcatccccacacatccctcggggcacataggc
gaggtgctgtgtgagcagcgctactctgagatcgagccctccagccacggcgaggtcatc
ttcaaggtgctggatccctccatcccagtggtggacccgtacagtcccagcatccaggag
ctgctgcgtgtcaccaacctgcgtgtgaacctcaccaagctgcacacgctgggggacaac
ctgctcgactcacggcaggaagtgctgcacaaatactactatgctgtggatgagctggtg
atgcgtgggagctgcttctgccacggccacgctgctgagtgtgccactgcacctggtgct
ccgccatctgtccctggcatgatccacgggcgctgtgtctgcaagcaccacacgcagggg
ctgaactgtgagcgctgcgaggacttctaccacgagctgccctggcgcccggctgagggc
tccagcaccaacgcctgccgccggtgcgactgcaacgagcactcacggcgctgccacttc
gacatggccgtgttcctggccaccgggaacaccagcggggccgtgtgcgatggctgccag
cacaacaccatggggcgccgctgccatctctgcaagcccttctactaccggcacccgcgc
tccgatatccgcgctcccactgcctgcatcccgtgtgactgcgaccctgcgggatcgctg
gatggcggtgcctgcgatgcacacacggacgtggcgctgggcatgatcgcggggcagtgc
cgctgcaaggagaacgtggccgggccacgctgcgaccgctgccggcacggagcctacggc
ctcagccagggagaccctcagggctgccagccgtgccggtgtgacccacggggcacggtg
gcgggcagctccccctgtgaccccatcagcggggactgctactgcaagcgcttcgtggcc
gggcgctcctgcagccagtgcgtgcctgaattctggggcctgagctatgatgtagggggc
tgccggccctgctcctgtgacttcgggggagcttacagcaaccggtgctccatggaggac
ggggcctgtccctgccgcccccacctcatgggccggcagtgtgaccaggtgcagcccggc
ttcttctgcgcaccccttgaccactacacctacgaggctgagcaagccgtgggccgcggg
cccagccatccccagctcccaggcgccgtgcgggcagaggtgccccaggactgcccccag
caccgcagtggggacccagcggggcggaaagcacgtgctcggccccagcgcagccctccc
cgctccccccagccccgcgcagccccacgccacagcctccagcagccccccaagcccgac
gtggagccggtgctgcgagatggggacgggcgcatggtgacgtggactggactggggttt
gcccgtgtgcgggatggagccgggctgacattccatgtagacaacgtgccctaccccatg
gagtacgagctgctgctgcgttatgagcctgagtcagccgaggactgggaggctgtggtg
agcatcagctcccgggcgctgcccaccggaccacgctgtgggaacctgctgccctcagag
cagatgtaccacgaaggcctgccccacagccagaggtatgtgctgctgtcccagcccttc
tgcttcgagcccagtaccccatacgaagtaactgtgcggctgcagagagccagcgtcacc
cagcgccaccccagtgccttcatcctcatcgactcactggtgctgctgccacgtgtgcca
gagctgccgggcttccacggggcagcagtggaagcggtgcagcggctggaggagctggag
cgctaccgatgcctggaggctttccatatggccccaccgcacaccctggctgaagcctgc
gcccgcctcgtctgcagcgtctcagccgtgctgcacgatggagctctgccctgccagtgt
gacccacaaggctcccgcagcagcgtgtgccaggtgctgtcagggcagtgtgagtgcaag
ccccacgtcctcggccgacgctgtgaccgctgcgcacccggcagctacggctttggaccc
ctggggtgcagcccctgcgcctgctccccggagggctctgtgtcgcagctgtgtgatgcg
ggcagtgggcagtgccgctgccagccgggcgttatgggccggcagtgcgaccgctgccag
ccaggacactggggcttccccagctgccggccctgccagtgcaacgggcacgccgaggag
tgcgacctgcggacgggcagctgcctgcgctgccgagaccacaccaccggccggcactgc
gagagatgccaagatggttattatggagacccggtgctgggctcagggcagcagtgccgc
ccttgtccctgccctggctaccctggcacacggcactaccacgggagcgcctgccatgcc
gacgaggagacccaccacatcgtgtgcctctgcgcgcccggatacaccgggccccgctgc
gaccgctgctccccgggctactttgggacgccggagatggagggaggagtgtgccggccc
tgccagtgcaacaacaacatcgacaccagcgacccgggggcctgtgacccgcacacaggg
cactgccgccgctgcctgtaccacactgccgggccccgctgcgcccagtgccagcccggc
tatttcggcaatgccctgcagcgcagctgtcgccgctgcagctgtgacccgcggggaacg
ctgtctgcccactgcaccgctggcacctgcagctgtgaccgcgctacgggagcctgtgcc
tgcagagccaatgtggtgggcaggagctgcgaccgctgtgcacccaacttctggaacctg
ggggggacggagggctgccagccttgtggatgccatgccatgcatgccacgcaccccgct
tgcgacgaggtcacagggcagtgccactgccacctcggctttggtggccgtgtctgttcc
cagtgccaggagaatcactggggagaccccgagctgcagtgccgagcctgcgaatgtgag
ccactgggtgctgagagccctcagtgcgaccgagccagtgggcagtgccagtgccggcca
ggctttggggggctgcgctgcgaccgctgccagcggggctaccaggccgccttccctcgc
tgctctccatgccacccctgctttgggcactgggatgcagtgctgggcagcctgcaggat
gggctgcagcaccttggggcacgggtacgggcactgcatgagggagggtctgcagccccg
ctcagcccccgcctgcgagcactggaggaggccctgaagcatgcagagcggctgctgggt
gaggggagcagccctagtagccccctcctgcaggagctggccgggcagctggatggcagc
aggacggagctggacaacttctggaagaggcttcaagagctggagcaacacgtggatcag
ctggagcaggctgatgtgctgcaccacagccggctggccaggctgagccatgagttgggt
gggctcaaccaaaccacctcccacctgcaagctgtccttggcaccgtgacaacagcagga
ttcagggagtcataccagagcatcgtggtggcagcacgggactcacggcaggcagaggtg
gtggccaatggcacggcaggtgagctgaatgcagcacgggccacgcagtgggcagctgag
caggccctgcagcagcggggtgatgcgttccgccggagcatggctgcacagcggaaatcc
ctgcgggagacacagaaacgggcgtcagggctcagcgtgactgggatcaatgagaagatt
tgcggggctcctggagaccggagctgtgcagaatcactgtgtggaggagctctgtgccgg
gacagcgtggggatgaggcactgcgggggtgtggggtgcacaggggccctgcccgtgtca
gctcaagccctgagcagtgcccgcaatgcctcacagcagctggaggtggccctgggacag
ctgagtgctgtgacacagaagatgcaggaggttcaggacctggcacggggtgcccgcagc
cgtgcagaggaggcgttggaacgctcacaggctgcccgcagccgcacagagaaagcgaca
gcacagttgcgggacttcatccgccgcatcaaagccttcctgtcggaggagggtgcagat
ccaggcagcatcgagctggtggcgcggcaggtgctgaacatctccctgcccagcagccct
gcacacatccaggagctgctgcaggagatgcaggagagcatcagccagctggatggggtg
gacgcggtgctcaacggcacggcacaggggctggaggctgcacaggggctgctggcacag
ggacaggatgccagggagcgagcagagggcgtgagggacgagctggcggagacgcagctc
gcactgcaggtggcacaggcacaggtgatggcagctgggagcaccctgcggagagccaag
gatggcatccgggctgctgagggcaaagtcagggaggcggagcgcaggctgcaggcgctg
caggggaaggaatcacggctgcagcggcggctgcgggagctggcacagcgcgtcaccgcc
ctgcagcagcgcggacgggacgcccggcgcctggcacaggatgccaaggatggggcgcag
cgtgccaccgccgcctcgaggacgctcagccaggacctggcgcaggtgactcggcgctac
gtggtgctcaaggaccgggtgagcgggatggcagggatggccggcggggccctgcagcgc
gtgacgcggctgacggccgaggccagggacctgctggataaagccaacagcagcaagaag
cggctggaagagctggagcagcacttcggggccaacgagcaggcgatggcggccaaggcg
acgcggctgcaggcgctggagcggcaggtgtcggggctgctgcaggagatccgcgagcgg
gccaacgcgtacgccacctgctag

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